RNA–Protein interactions for RNA: YBR148W

YSW1, Transcript of Protein required for normal prospore membrane formation, yeastyeast

Gene YSW1, Length 1,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSW1YBR148W YPR010C-AA5Z2X5 72 aa0.17□□□□□ -2.38
YSW1YBR148W NUP188P52593 1655 aaKnown RBP0.16□□□□□ -2.38
YSW1YBR148W YGL258W-AQ3E740 77 aa0.16□□□□□ -2.38
YSW1YBR148W USO1P25386 1790 aa0.15□□□□□ -2.39
YSW1YBR148W SSK2P53599 1579 aa0.12□□□□□ -2.39
YSW1YBR148W ULS1Q08562 1619 aa0.12□□□□□ -2.39
YSW1YBR148W YDR524C-BQ3E6R4 66 aa0.11□□□□□ -2.39
YSW1YBR148W YOR072W-BQ3E832 53 aa0.11□□□□□ -2.39
YSW1YBR148W NUP192P47054 1683 aa0.11□□□□□ -2.39
YSW1YBR148W COA2Q3E823 68 aa0.1□□□□□ -2.39
YSW1YBR148W PEP1P32319 1579 aa0.1□□□□□ -2.39
YSW1YBR148W BUD3P25558 1636 aa0.08□□□□□ -2.4
YSW1YBR148W STU1P38198 1513 aa0.05□□□□□ -2.4
YSW1YBR148W HIR3P47171 1648 aa0.05□□□□□ -2.4
YSW1YBR148W RKR1Q04781 1562 aa0.05□□□□□ -2.4
YSW1YBR148W GCN2P15442 1659 aa0.04□□□□□ -2.4
YSW1YBR148W FIG2P25653 1609 aa0.03□□□□□ -2.41
YSW1YBR148W TOR2P32600 2474 aaKnown RBP0.01□□□□□ -2.41
YSW1YBR148W YHR050W-AQ05451 56 aa0.01□□□□□ -2.41
YSW1YBR148W FMP27Q06179 2628 aa0.01□□□□□ -2.41
YSW1YBR148W ATG2P53855 1592 aa0.01□□□□□ -2.41
YSW1YBR148W YPR117WQ06116 2489 aa0.01□□□□□ -2.41
YSW1YBR148W YOR316C-AQ3E806 69 aa0.01□□□□□ -2.41
YSW1YBR148W MEC1P38111 2368 aa0□□□□□ -2.41
YSW1YBR148W NUP170P38181 1502 aa0□□□□□ -2.41
YSW1YBR148W YJL133C-AQ3E7A3 74 aa0□□□□□ -2.41
YSW1YBR148W THO2P53552 1597 aaKnown RBP-0.01□□□□□ -2.41
YSW1YBR148W YLR342W-AQ3E810 57 aa-0.01□□□□□ -2.41
YSW1YBR148W YDR034C-AP0C289 58 aa-0.02□□□□□ -2.41
YSW1YBR148W FLO1P32768 1537 aa-0.03□□□□□ -2.41
YSW1YBR148W DDR2P89113 61 aa-0.05□□□□□ -2.42
YSW1YBR148W RPL29P05747 59 aaPredicted RBP-0.06□□□□□ -2.42
YSW1YBR148W COX9P07255 59 aa-0.07□□□□□ -2.42
YSW1YBR148W TEL1P38110 2787 aa-0.09□□□□□ -2.42
YSW1YBR148W Q0017Q9ZZX8 53 aa-0.11□□□□□ -2.43
YSW1YBR148W DYN1P36022 4092 aa-0.12□□□□□ -2.43
YSW1YBR148W GCN1P33892 2672 aaKnown RBP-0.13□□□□□ -2.43
YSW1YBR148W YJL127C-BQ3E828 52 aa-0.13□□□□□ -2.43
YSW1YBR148W SMX2P40204 77 aaKnown RBP-0.14□□□□□ -2.43
YSW1YBR148W YHR073W-AP0C5N7 58 aa-0.15□□□□□ -2.43
YSW1YBR148W YML054C-AQ3E809 52 aa-0.15□□□□□ -2.43
YSW1YBR148W CSF1Q12150 2958 aa-0.16□□□□□ -2.43
YSW1YBR148W TRA1P38811 3744 aa-0.16□□□□□ -2.44
YSW1YBR148W MLP2P40457 1679 aa-0.19□□□□□ -2.44
YSW1YBR148W TOM7P53507 60 aa-0.21□□□□□ -2.44
YSW1YBR148W CHC1P22137 1653 aaKnown RBP-0.21□□□□□ -2.44
YSW1YBR148W IRA1P18963 3092 aa-0.25□□□□□ -2.45
YSW1YBR148W PMP3P87284 55 aa-0.29□□□□□ -2.46
YSW1YBR148W MDN1Q12019 4910 aaKnown RBP-0.3□□□□□ -2.46
YSW1YBR148W CUP1-1P0CX80 61 aa-0.33□□□□□ -2.46
YSW1YBR148W CUP1-2P0CX81 61 aa-0.33□□□□□ -2.46
YSW1YBR148W IRA2P19158 3079 aa-0.34□□□□□ -2.46
YSW1YBR148W NUM1Q00402 2748 aa-0.34□□□□□ -2.46
YSW1YBR148W HOR7Q05827 59 aa-0.36□□□□□ -2.47
YSW1YBR148W VPS13Q07878 3144 aa-0.38□□□□□ -2.47
YSW1YBR148W YMR105W-AQ8TGS8 64 aa-0.4□□□□□ -2.47
YSW1YBR148W NCE101Q02820 53 aa-0.48□□□□□ -2.49
YSW1YBR148W YLL066W-BQ8TGJ7 56 aa-0.5□□□□□ -2.49
YSW1YBR148W RPL39P04650 51 aa-0.71□□□□□ -2.52
YSW1YBR148W TOM1Q03280 3268 aa-0.74□□□□□ -2.53
YSW1YBR148W YIL046W-AQ3E7Z4 54 aa-0.96□□□□□ -2.56
YSW1YBR148W Q0297Q9ZZV8 51 aa-1.06□□□□□ -2.58
YSW1YBR148W YDR034W-BQ6Q5X2 51 aa-1.72□□□□□ -2.68
Retrieved 63 of 5,963 RNA–protein pairs in 67.9 ms