RNA–Protein interactions for RNA: YBR095C

RXT2, Transcript of Component of the histone deacetylase Rpd3L complex, yeast

Gene RXT2, Length 1,293 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RXT2	YBR095C	YOR093C	Q12275	1648 aa		0.32	□□□□□ -2.36
RXT2	YBR095C	NUP192	P47054	1683 aa		0.31	□□□□□ -2.36
RXT2	YBR095C	USO1	P25386	1790 aa		0.31	□□□□□ -2.36
RXT2	YBR095C	PEP1	P32319	1579 aa		0.3	□□□□□ -2.36
RXT2	YBR095C	RKR1	Q04781	1562 aa		0.3	□□□□□ -2.36
RXT2	YBR095C	NUP170	P38181	1502 aa		0.28	□□□□□ -2.36
RXT2	YBR095C	YOR192C-C	Q3E736	78 aa		0.28	□□□□□ -2.36
RXT2	YBR095C	THO2	P53552	1597 aa	Known RBP	0.28	□□□□□ -2.37
RXT2	YBR095C	HIR3	P47171	1648 aa		0.27	□□□□□ -2.37
RXT2	YBR095C	STU1	P38198	1513 aa		0.27	□□□□□ -2.37
RXT2	YBR095C	YPR010C-A	A5Z2X5	72 aa		0.26	□□□□□ -2.37
RXT2	YBR095C	YOR072W-B	Q3E832	53 aa		0.25	□□□□□ -2.37
RXT2	YBR095C	ATG2	P53855	1592 aa		0.23	□□□□□ -2.37
RXT2	YBR095C	UTP20	P35194	2493 aa	Known RBP	0.21	□□□□□ -2.38
RXT2	YBR095C	YGL258W-A	Q3E740	77 aa		0.2	□□□□□ -2.38
RXT2	YBR095C	YLL006W-A	Q3E814	58 aa		0.2	□□□□□ -2.38
RXT2	YBR095C	YOR316C-A	Q3E806	69 aa		0.19	□□□□□ -2.38
RXT2	YBR095C	TOR1	P35169	2470 aa		0.18	□□□□□ -2.38
RXT2	YBR095C	COX9	P07255	59 aa		0.16	□□□□□ -2.38
RXT2	YBR095C	FIG2	P25653	1609 aa		0.16	□□□□□ -2.38
RXT2	YBR095C	YHR050W-A	Q05451	56 aa		0.15	□□□□□ -2.39
RXT2	YBR095C	GCN2	P15442	1659 aa		0.13	□□□□□ -2.39
RXT2	YBR095C	FLO1	P32768	1537 aa		0.13	□□□□□ -2.39
RXT2	YBR095C	DDR2	P89113	61 aa		0.11	□□□□□ -2.39
RXT2	YBR095C	YJL133C-A	Q3E7A3	74 aa		0.08	□□□□□ -2.4
RXT2	YBR095C	YLR342W-A	Q3E810	57 aa		0.08	□□□□□ -2.4
RXT2	YBR095C	YDR034C-A	P0C289	58 aa		0.07	□□□□□ -2.4
RXT2	YBR095C	RPL29	P05747	59 aa	Predicted RBP	0.04	□□□□□ -2.4
RXT2	YBR095C	MLP2	P40457	1679 aa		0.04	□□□□□ -2.4
RXT2	YBR095C	YHR073W-A	P0C5N7	58 aa		0.03	□□□□□ -2.4
RXT2	YBR095C	Q0017	Q9ZZX8	53 aa		0.01	□□□□□ -2.41
RXT2	YBR095C	TOR2	P32600	2474 aa	Known RBP	0.01	□□□□□ -2.41
RXT2	YBR095C	SMX2	P40204	77 aa	Known RBP	0	□□□□□ -2.41
RXT2	YBR095C	YML054C-A	Q3E809	52 aa		-0.01	□□□□□ -2.41
RXT2	YBR095C	CHC1	P22137	1653 aa	Known RBP	-0.02	□□□□□ -2.41
RXT2	YBR095C	DYN1	P36022	4092 aa		-0.04	□□□□□ -2.42
RXT2	YBR095C	FMP27	Q06179	2628 aa		-0.04	□□□□□ -2.42
RXT2	YBR095C	MEC1	P38111	2368 aa		-0.04	□□□□□ -2.42
RXT2	YBR095C	YJL127C-B	Q3E828	52 aa		-0.05	□□□□□ -2.42
RXT2	YBR095C	YPR117W	Q06116	2489 aa		-0.07	□□□□□ -2.42
RXT2	YBR095C	PMP3	P87284	55 aa		-0.14	□□□□□ -2.43
RXT2	YBR095C	HOR7	Q05827	59 aa		-0.15	□□□□□ -2.43
RXT2	YBR095C	TEL1	P38110	2787 aa		-0.15	□□□□□ -2.43
RXT2	YBR095C	CUP1-1	P0CX80	61 aa		-0.19	□□□□□ -2.44
RXT2	YBR095C	CUP1-2	P0CX81	61 aa		-0.19	□□□□□ -2.44
RXT2	YBR095C	TOM7	P53507	60 aa		-0.2	□□□□□ -2.44
RXT2	YBR095C	YMR105W-A	Q8TGS8	64 aa		-0.21	□□□□□ -2.44
RXT2	YBR095C	TRA1	P38811	3744 aa		-0.25	□□□□□ -2.45
RXT2	YBR095C	MDN1	Q12019	4910 aa	Known RBP	-0.25	□□□□□ -2.45
RXT2	YBR095C	YBR056W-A	I2HB52	66 aa		-0.26	□□□□□ -2.45
RXT2	YBR095C	GCN1	P33892	2672 aa	Known RBP	-0.29	□□□□□ -2.46
RXT2	YBR095C	CSF1	Q12150	2958 aa		-0.3	□□□□□ -2.46
RXT2	YBR095C	IRA1	P18963	3092 aa		-0.35	□□□□□ -2.47
RXT2	YBR095C	NCE101	Q02820	53 aa		-0.36	□□□□□ -2.47
RXT2	YBR095C	YLL066W-B	Q8TGJ7	56 aa		-0.36	□□□□□ -2.47
RXT2	YBR095C	NUM1	Q00402	2748 aa		-0.44	□□□□□ -2.48
RXT2	YBR095C	IRA2	P19158	3079 aa		-0.47	□□□□□ -2.48
RXT2	YBR095C	VPS13	Q07878	3144 aa		-0.51	□□□□□ -2.49
RXT2	YBR095C	RPL39	P04650	51 aa		-0.7	□□□□□ -2.52
RXT2	YBR095C	TOM1	Q03280	3268 aa		-0.86	□□□□□ -2.55
RXT2	YBR095C	YIL046W-A	Q3E7Z4	54 aa		-0.89	□□□□□ -2.55
RXT2	YBR095C	Q0297	Q9ZZV8	51 aa		-0.98	□□□□□ -2.57
RXT2	YBR095C	YDR034W-B	Q6Q5X2	51 aa		-1.7	□□□□□ -2.68

Retrieved 63 of 5,963 RNA–protein pairs in 60.7 ms