RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	CHORDC1	Q9UHD1	332 aa	Predicted RBP	12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	GRID1	Q9ULK0	1009 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	SMG5	Q9UPR3	1016 aa	Known RBP	12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	UMODL1	Q5DID0	1318 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	GYG2	O15488	501 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	GSC2	O15499	205 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	ZCCHC18	P0CG32	403 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	GZMA	P12544	262 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	KRT5	P13647	590 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	ACO1	P21399	889 aa	Known RBP	12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	IVD	P26440	423 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	ADCY8	P40145	1251 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	PSMD7	P51665	324 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	NOP14	P78316	857 aa	Known RBP	12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	IRF5	Q13568	498 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	CUL2	Q13617	745 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	NCOA4	Q13772	614 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	CEP128	Q6ZU80	1094 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	OTOA	Q7RTW8	1153 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	PRUNE1	Q86TP1	453 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	IFNL1	Q8IU54	200 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	VPS52	Q8N1B4	723 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	PPP2R3C	Q969Q6	453 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	C9orf72	Q96LT7	481 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	PPP1R16B	Q96T49	567 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	DDX50	Q9BQ39	737 aa	Known RBP	12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	CENPK	Q9BS16	269 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	PLVAP	Q9BX97	442 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	MTMR12	Q9C0I1	747 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	PRMT7	Q9NVM4	692 aa	Predicted RBP	12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	GNE	Q9Y223	722 aa	Known RBP	12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	AKT3	Q9Y243	479 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	TNFSF13B	Q9Y275	285 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	EXOC1L	A0A1B0GW35	172 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	CSDE1	O75534	798 aa	Known RBP	12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	CALCA	P01258	141 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	ZNF865	P0CJ78	1059 aa	Predicted RBP	12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	CA4	P22748	312 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	MAN1A1	P33908	653 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	AP3M2	P53677	418 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	SLC18A1	P54219	525 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	CCL14	Q16627	93 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	WDR72	Q3MJ13	1102 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	DAB2IP	Q5VWQ8	1189 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	KBTBD2	Q8IY47	623 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	ZNF398	Q8TD17	642 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	GRK7	Q8WTQ7	553 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	SMC6	Q96SB8	1091 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	TUBB6	Q9BUF5	446 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	TRABD	Q9H4I3	376 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	CYLD	Q9NQC7	956 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	KRT82	Q9NSB4	513 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
SPG7-222	ENST00000569820	COMMD3-BMI1	R4GMX3	469 aa		12.5	□□□□□ -0.41
SPG7-222	ENST00000569820		A6NJR5	290 aa		12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	HAUS5	O94927	633 aa		12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	TROVE2	P10155	538 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	VPS41	P49754	854 aa		12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	OLFML2B	Q68BL8	750 aa		12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	CPNE8	Q86YQ8	564 aa		12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	TMEM192	Q8IY95	271 aa		12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	THNSL1	Q8IYQ7	743 aa		12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	ATP11C	Q8NB49	1132 aa		12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	ATG4A	Q8WYN0	398 aa		12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	LENG1	Q96BZ8	264 aa	Predicted RBP	12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	ZNF653	Q96CK0	615 aa		12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	DDX43	Q9NXZ2	648 aa	Known RBP	12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	CFAP69	A5D8W1	941 aa		12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	FAM155A	B1AL88	458 aa	Predicted RBP	12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	FSCN2	O14926	492 aa		12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	ATMIN	O43313	823 aa	Predicted RBP	12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	MTA2	O94776	668 aa		12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	F2	P00734	622 aa		12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	ASS1	P00966	412 aa	Known RBP	12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	CYP1A1	P04798	512 aa	Predicted RBP	12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	KRT15	P19012	456 aa		12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	RPA3	P35244	121 aa	Predicted RBP	12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	SURF1	Q15526	300 aa		12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	LIN52	Q52LA3	116 aa		12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	CYP4F22	Q6NT55	531 aa		12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	ZNF564	Q8TBZ8	553 aa	Predicted RBP	12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	WDR60	Q8WVS4	1066 aa		12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	HAPLN3	Q96S86	360 aa		12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	CHST7	Q9NS84	486 aa		12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	ANGPTL2	Q9UKU9	493 aa		12.49	□□□□□ -0.41
SPG7-222	ENST00000569820	PCNT	O95613	3336 aa		12.48	□□□□□ -0.41
SPG7-222	ENST00000569820	GPR25	O00155	361 aa		12.48	□□□□□ -0.41
SPG7-222	ENST00000569820	DYNC1LI2	O43237	492 aa	Predicted RBP	12.48	□□□□□ -0.41
SPG7-222	ENST00000569820	CST3	P01034	146 aa	Predicted RBP	12.48	□□□□□ -0.41
SPG7-222	ENST00000569820	IGHA2	P01877	340 aa		12.48	□□□□□ -0.41
SPG7-222	ENST00000569820	ABHD2	P08910	425 aa		12.48	□□□□□ -0.41
SPG7-222	ENST00000569820	TBXAS1	P24557	533 aa	Predicted RBP	12.48	□□□□□ -0.41
SPG7-222	ENST00000569820	CDK7	P50613	346 aa		12.48	□□□□□ -0.41
SPG7-222	ENST00000569820	NEK3	P51956	506 aa		12.48	□□□□□ -0.41
SPG7-222	ENST00000569820	OSTN	P61366	133 aa		12.48	□□□□□ -0.41
SPG7-222	ENST00000569820	USP46	P62068	366 aa		12.48	□□□□□ -0.41
SPG7-222	ENST00000569820	LSAMP	Q13449	338 aa		12.48	□□□□□ -0.41
SPG7-222	ENST00000569820	KIAA0319L	Q8IZA0	1049 aa		12.48	□□□□□ -0.41
SPG7-222	ENST00000569820	C4orf33	Q8N1A6	199 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms