RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C HEH2Q03281 663 aa3.08□□□□□ -1.92
NIP100YPL174C SUB2Q07478 446 aaKnown RBP3.08□□□□□ -1.92
NIP100YPL174C ALG14P38242 237 aa3.07□□□□□ -1.92
NIP100YPL174C KAR5Q04746 504 aa3.07□□□□□ -1.92
NIP100YPL174C NOB1Q08444 459 aaKnown RBP3.07□□□□□ -1.92
NIP100YPL174C YPR053CQ6Q5F3 151 aa3.07□□□□□ -1.92
NIP100YPL174C GPM1P00950 247 aaKnown RBP3.07□□□□□ -1.92
NIP100YPL174C MRPL33P20084 86 aa3.07□□□□□ -1.92
NIP100YPL174C MDJ1P35191 511 aa3.07□□□□□ -1.92
NIP100YPL174C ICP55P40051 511 aa3.07□□□□□ -1.92
NIP100YPL174C YJL181WP46987 611 aa3.07□□□□□ -1.92
NIP100YPL174C ALD2P47771 506 aa3.07□□□□□ -1.92
NIP100YPL174C TY1A-DR2Q03964 440 aaKnown RBP3.07□□□□□ -1.92
NIP100YPL174C SSA1P10591 642 aaKnown RBP3.06□□□□□ -1.92
NIP100YPL174C VMA3P25515 160 aa3.06□□□□□ -1.92
NIP100YPL174C YBR197CP38306 217 aa3.06□□□□□ -1.92
NIP100YPL174C SBE2P42223 864 aaKnown RBP3.06□□□□□ -1.92
NIP100YPL174C ECM2P38241 364 aaKnown RBP3.06□□□□□ -1.92
NIP100YPL174C HXT5P38695 592 aa3.06□□□□□ -1.92
NIP100YPL174C SPR3P41901 512 aa3.06□□□□□ -1.92
NIP100YPL174C YMR187CQ03236 431 aa3.06□□□□□ -1.92
NIP100YPL174C MTC5Q03897 1148 aa3.06□□□□□ -1.92
NIP100YPL174C RSC2Q06488 889 aa3.06□□□□□ -1.92
NIP100YPL174C SBP1P10080 294 aaKnown RBP3.06□□□□□ -1.92
NIP100YPL174C PDC5P16467 563 aaKnown RBP3.06□□□□□ -1.92
NIP100YPL174C CAB1Q04430 367 aa3.06□□□□□ -1.92
NIP100YPL174C GLO3P38682 493 aaKnown RBP3.05□□□□□ -1.92
NIP100YPL174C APM2P38700 605 aa3.05□□□□□ -1.92
NIP100YPL174C TDA6Q06466 467 aa3.05□□□□□ -1.92
NIP100YPL174C TAT1P38085 619 aa3.05□□□□□ -1.92
NIP100YPL174C ISW1P38144 1129 aa3.05□□□□□ -1.92
NIP100YPL174C GIP1P38229 639 aa3.05□□□□□ -1.92
NIP100YPL174C LSB3P43603 459 aaKnown RBP3.05□□□□□ -1.92
NIP100YPL174C KNS1P32350 737 aaPredicted RBP3.04□□□□□ -1.92
NIP100YPL174C BSD2P38356 321 aa3.04□□□□□ -1.92
NIP100YPL174C NHA1Q99271 985 aa3.04□□□□□ -1.92
NIP100YPL174C SUV3P32580 737 aa3.04□□□□□ -1.92
NIP100YPL174C PRK1P40494 810 aa3.04□□□□□ -1.92
NIP100YPL174C HXT8P40886 569 aa3.03□□□□□ -1.92
NIP100YPL174C PPT1P53043 513 aa3.03□□□□□ -1.92
NIP100YPL174C YOR296WQ08748 1289 aa3.03□□□□□ -1.92
NIP100YPL174C CDC3P32457 520 aaKnown RBP3.03□□□□□ -1.93
NIP100YPL174C PGM2P37012 569 aaKnown RBP3.03□□□□□ -1.93
NIP100YPL174C AIM46P38885 310 aa3.03□□□□□ -1.93
NIP100YPL174C SMC1P32908 1225 aa3.02□□□□□ -1.93
NIP100YPL174C RAD55P38953 406 aa3.02□□□□□ -1.93
NIP100YPL174C YNR040WP53736 256 aa3.02□□□□□ -1.93
NIP100YPL174C GRS1P38088 690 aaKnown RBP3.02□□□□□ -1.93
NIP100YPL174C CWC15Q03772 175 aaKnown RBP3.02□□□□□ -1.93
NIP100YPL174C TAF7Q05021 590 aa3.02□□□□□ -1.93
NIP100YPL174C RGA2Q06407 1009 aa3.02□□□□□ -1.93
NIP100YPL174C RPB10P22139 70 aa3.01□□□□□ -1.93
NIP100YPL174C GEF1P37020 779 aa3.01□□□□□ -1.93
NIP100YPL174C SKP1P52286 194 aa3.01□□□□□ -1.93
NIP100YPL174C SOK2P53438 785 aaPredicted RBP3.01□□□□□ -1.93
NIP100YPL174C MSN1P22148 382 aa3□□□□□ -1.93
NIP100YPL174C COQ2P32378 372 aa3□□□□□ -1.93
NIP100YPL174C NEO1P40527 1151 aa3□□□□□ -1.93
NIP100YPL174C HAT1Q12341 374 aa3□□□□□ -1.93
NIP100YPL174C IDI1P15496 288 aa2.99□□□□□ -1.93
NIP100YPL174C RPC31P17890 251 aa2.99□□□□□ -1.93
NIP100YPL174C TPS3P38426 1054 aaKnown RBP2.99□□□□□ -1.93
NIP100YPL174C MSC7P38694 644 aa2.99□□□□□ -1.93
NIP100YPL174C RRM3P38766 723 aa2.99□□□□□ -1.93
NIP100YPL174C QDR1P40475 563 aa2.99□□□□□ -1.93
NIP100YPL174C PRY1P47032 299 aa2.99□□□□□ -1.93
NIP100YPL174C ITC1P53125 1264 aa2.99□□□□□ -1.93
NIP100YPL174C YMR074CQ04773 145 aa2.99□□□□□ -1.93
NIP100YPL174C MCX1P38323 520 aaPredicted RBP2.99□□□□□ -1.93
NIP100YPL174C BOL3P39724 118 aa2.99□□□□□ -1.93
NIP100YPL174C TED1P40533 473 aa2.99□□□□□ -1.93
NIP100YPL174C SAC7P17121 654 aa2.98□□□□□ -1.93
NIP100YPL174C THI12P42883 340 aa2.98□□□□□ -1.93
NIP100YPL174C THI5P43534 340 aa2.98□□□□□ -1.93
NIP100YPL174C THI11P47183 340 aa2.98□□□□□ -1.93
NIP100YPL174C GIS4Q04233 774 aa2.98□□□□□ -1.93
NIP100YPL174C THI13Q07748 340 aa2.98□□□□□ -1.93
NIP100YPL174C NAR1P23503 491 aaKnown RBP2.97□□□□□ -1.93
NIP100YPL174C IRS4P36115 615 aaKnown RBP2.97□□□□□ -1.93
NIP100YPL174C BOI1P38041 980 aaKnown RBP2.97□□□□□ -1.93
NIP100YPL174C YIL165CP40446 119 aa2.97□□□□□ -1.93
NIP100YPL174C YFL066CP43538 392 aa2.97□□□□□ -1.93
NIP100YPL174C UFD2P54860 961 aa2.97□□□□□ -1.93
NIP100YPL174C LSO1Q3E827 93 aa2.97□□□□□ -1.93
NIP100YPL174C SLN1P39928 1220 aaPredicted RBP2.97□□□□□ -1.93
NIP100YPL174C GIP2P40036 548 aa2.97□□□□□ -1.93
NIP100YPL174C YER156CP40093 338 aaKnown RBP2.97□□□□□ -1.93
NIP100YPL174C YBL113CQ7M4S9 792 aa2.97□□□□□ -1.93
NIP100YPL174C RSC6P25632 483 aa2.96□□□□□ -1.94
NIP100YPL174C PSY2P40164 858 aa2.96□□□□□ -1.94
NIP100YPL174C YHL008CP38750 627 aa2.96□□□□□ -1.94
NIP100YPL174C NTA1P40354 457 aa2.96□□□□□ -1.94
NIP100YPL174C ATG1P53104 897 aa2.96□□□□□ -1.94
NIP100YPL174C GAS5Q08193 484 aa2.96□□□□□ -1.94
NIP100YPL174C MCA1Q08601 432 aa2.96□□□□□ -1.94
NIP100YPL174C YDR215CQ12240 137 aa2.96□□□□□ -1.94
NIP100YPL174C MAC1P35192 417 aa2.95□□□□□ -1.94
NIP100YPL174C ATG14P38270 344 aa2.95□□□□□ -1.94
NIP100YPL174C TIF6Q12522 245 aaKnown RBP2.95□□□□□ -1.94
NIP100YPL174C MRP10O75012 95 aa2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms