RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeastyeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDE1YPL110C KEX1P09620 729 aa5.07□□□□□ -1.6
GDE1YPL110C PMC1P38929 1173 aaPredicted RBP5.07□□□□□ -1.6
GDE1YPL110C TY4A-HQ6Q5P6 413 aa5.07□□□□□ -1.6
GDE1YPL110C NOC2P39744 710 aaKnown RBP5.06□□□□□ -1.6
GDE1YPL110C RIO2P40160 425 aaKnown RBP5.06□□□□□ -1.6
GDE1YPL110C IES1P43579 692 aa5.06□□□□□ -1.6
GDE1YPL110C LTE1P07866 1435 aa5.06□□□□□ -1.6
GDE1YPL110C CLB1P24868 471 aa5.06□□□□□ -1.6
GDE1YPL110C HIR2P32480 875 aa5.06□□□□□ -1.6
GDE1YPL110C YML119WQ03208 357 aa5.06□□□□□ -1.6
GDE1YPL110C MRD1Q06106 887 aaKnown RBP5.06□□□□□ -1.6
GDE1YPL110C UTP4Q06679 776 aaKnown RBP5.06□□□□□ -1.6
GDE1YPL110C PEX19Q07418 342 aa5.06□□□□□ -1.6
GDE1YPL110C SWI1P09547 1314 aa5.06□□□□□ -1.6
GDE1YPL110C DIT2P21595 489 aa5.05□□□□□ -1.6
GDE1YPL110C PKC1P24583 1151 aa5.05□□□□□ -1.6
GDE1YPL110C MSP1P28737 362 aa5.05□□□□□ -1.6
GDE1YPL110C TIF3P34167 436 aaKnown RBP5.05□□□□□ -1.6
GDE1YPL110C BEM4P39011 633 aa5.05□□□□□ -1.6
GDE1YPL110C HEH2Q03281 663 aa5.05□□□□□ -1.6
GDE1YPL110C NKP1Q12493 238 aa5.05□□□□□ -1.6
GDE1YPL110C NUP192P47054 1683 aa5.05□□□□□ -1.6
GDE1YPL110C RME1P32338 300 aaKnown RBP5.05□□□□□ -1.6
GDE1YPL110C COY1P34237 679 aa5.05□□□□□ -1.6
GDE1YPL110C SHE4P51534 789 aa5.05□□□□□ -1.6
GDE1YPL110C CTF4Q01454 927 aa5.05□□□□□ -1.6
GDE1YPL110C INP2Q03824 705 aa5.05□□□□□ -1.6
GDE1YPL110C NOB1Q08444 459 aaKnown RBP5.05□□□□□ -1.6
GDE1YPL110C UBP1P25037 809 aa5.05□□□□□ -1.6
GDE1YPL110C RPC37P36121 282 aa5.05□□□□□ -1.6
GDE1YPL110C SIT1P39980 628 aa5.05□□□□□ -1.6
GDE1YPL110C CST6P40535 587 aa5.05□□□□□ -1.6
GDE1YPL110C PNG1Q02890 363 aa5.05□□□□□ -1.6
GDE1YPL110C ARR2Q06597 130 aa5.05□□□□□ -1.6
GDE1YPL110C SLD2P34252 453 aa5.04□□□□□ -1.6
GDE1YPL110C OLA1P38219 394 aaKnown RBP5.04□□□□□ -1.6
GDE1YPL110C PSD2P53037 1138 aaKnown RBP5.04□□□□□ -1.6
GDE1YPL110C MRS2Q01926 470 aa5.04□□□□□ -1.6
GDE1YPL110C RSM28Q03430 361 aa5.04□□□□□ -1.6
GDE1YPL110C VHR2P40041 505 aa5.04□□□□□ -1.6
GDE1YPL110C ITT1Q04638 464 aa5.04□□□□□ -1.6
GDE1YPL110C RTC1Q08281 1341 aa5.04□□□□□ -1.6
GDE1YPL110C LAM1P38851 1228 aa5.04□□□□□ -1.6
GDE1YPL110C DNM1P54861 757 aa5.04□□□□□ -1.6
GDE1YPL110C ISW2Q08773 1120 aa5.04□□□□□ -1.6
GDE1YPL110C RKM4Q12504 494 aa5.04□□□□□ -1.6
GDE1YPL110C BRR1Q99177 341 aaPredicted RBP5.04□□□□□ -1.6
GDE1YPL110C APL6P46682 809 aa5.03□□□□□ -1.6
GDE1YPL110C DNL4Q08387 944 aaPredicted RBP5.03□□□□□ -1.6
GDE1YPL110C TRS33Q99394 268 aa5.03□□□□□ -1.6
GDE1YPL110C PDI1P17967 522 aaKnown RBP5.03□□□□□ -1.6
GDE1YPL110C TOM20P35180 183 aa5.03□□□□□ -1.6
GDE1YPL110C TPM2P40414 161 aa5.03□□□□□ -1.6
GDE1YPL110C YIR042CP40586 236 aa5.03□□□□□ -1.6
GDE1YPL110C MSN5P52918 1224 aa5.03□□□□□ -1.6
GDE1YPL110C MUM2P38236 366 aa5.03□□□□□ -1.6
GDE1YPL110C VPS27P40343 622 aaKnown RBP5.03□□□□□ -1.6
GDE1YPL110C ELA1P53861 379 aaPredicted RBP5.03□□□□□ -1.6
GDE1YPL110C PCT1P13259 424 aa5.02□□□□□ -1.61
GDE1YPL110C CMP2P14747 604 aa5.02□□□□□ -1.61
GDE1YPL110C SEC23P15303 768 aaKnown RBP5.02□□□□□ -1.61
GDE1YPL110C PUF4P25339 888 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
GDE1YPL110C BFA1P47113 574 aa5.02□□□□□ -1.61
GDE1YPL110C LSC1P53598 329 aaKnown RBP5.02□□□□□ -1.61
GDE1YPL110C REX2P54964 269 aaKnown RBP5.02□□□□□ -1.61
GDE1YPL110C STE20Q03497 939 aaKnown RBP5.02□□□□□ -1.61
GDE1YPL110C ENT1Q12518 454 aa5.02□□□□□ -1.61
GDE1YPL110C NUP159P40477 1460 aa5.02□□□□□ -1.61
GDE1YPL110C MPH3P0CE00 602 aa5.02□□□□□ -1.61
GDE1YPL110C DPH5P32469 300 aaPredicted RBP5.02□□□□□ -1.61
GDE1YPL110C IST1P53843 298 aaPredicted RBP5.02□□□□□ -1.61
GDE1YPL110C ENT2Q05785 613 aa5.02□□□□□ -1.61
GDE1YPL110C RPG1P38249 964 aaKnown RBP5.02□□□□□ -1.61
GDE1YPL110C ATG14P38270 344 aa5.02□□□□□ -1.61
GDE1YPL110C SHC1P39000 512 aa5.02□□□□□ -1.61
GDE1YPL110C INP52P50942 1183 aa5.02□□□□□ -1.61
GDE1YPL110C FMP30Q02883 468 aa5.02□□□□□ -1.61
GDE1YPL110C ERP4Q12450 207 aa5.02□□□□□ -1.61
GDE1YPL110C FAR1P21268 830 aa5.01□□□□□ -1.61
GDE1YPL110C YLF2P38746 405 aa5.01□□□□□ -1.61
GDE1YPL110C MEP1P40260 492 aa5.01□□□□□ -1.61
GDE1YPL110C ATG32P40458 529 aa5.01□□□□□ -1.61
GDE1YPL110C SRP1Q02821 542 aaKnown RBP5.01□□□□□ -1.61
GDE1YPL110C TAP42Q04372 366 aa5.01□□□□□ -1.61
GDE1YPL110C SML1Q04964 104 aa5.01□□□□□ -1.61
GDE1YPL110C JIP5Q06214 492 aaPredicted RBP5.01□□□□□ -1.61
GDE1YPL110C RRP9Q06506 573 aaKnown RBP5.01□□□□□ -1.61
GDE1YPL110C RAV1P47104 1357 aa5.01□□□□□ -1.61
GDE1YPL110C CYB2P00175 591 aa5.01□□□□□ -1.61
GDE1YPL110C CDC10P25342 322 aaKnown RBP5.01□□□□□ -1.61
GDE1YPL110C MSH1P25846 959 aa5.01□□□□□ -1.61
GDE1YPL110C ARC19P33204 171 aaKnown RBP5.01□□□□□ -1.61
GDE1YPL110C MET1P36150 593 aa5.01□□□□□ -1.61
GDE1YPL110C ERC1P38767 581 aa5.01□□□□□ -1.61
GDE1YPL110C BIM1P40013 344 aa5.01□□□□□ -1.61
GDE1YPL110C PHM6Q05637 104 aa5.01□□□□□ -1.61
GDE1YPL110C PRI1P10363 409 aa5.01□□□□□ -1.61
GDE1YPL110C MER1P16523 270 aa5.01□□□□□ -1.61
GDE1YPL110C UGA3P26370 528 aa5.01□□□□□ -1.61
GDE1YPL110C MFT1P33441 392 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms