RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W GRX1P25373 110 aaKnown RBP3.09□□□□□ -1.91
VPS16YPL045W UTR2P32623 467 aa3.09□□□□□ -1.91
VPS16YPL045W TOM20P35180 183 aa3.09□□□□□ -1.91
VPS16YPL045W PBP2P38151 413 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
VPS16YPL045W NUG1P40010 520 aaKnown RBP3.09□□□□□ -1.91
VPS16YPL045W FKH1P40466 484 aa3.09□□□□□ -1.91
VPS16YPL045W EMW1P42842 904 aaKnown RBP3.09□□□□□ -1.91
VPS16YPL045W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91 RIP-Chip
VPS16YPL045W UBX5Q06682 500 aa3.09□□□□□ -1.91
VPS16YPL045W HXK1P04806 485 aaKnown RBP3.09□□□□□ -1.92
VPS16YPL045W FAA3P39002 694 aa3.09□□□□□ -1.92
VPS16YPL045W CWC24P53769 259 aa3.09□□□□□ -1.92
VPS16YPL045W RSC4Q02206 625 aa3.09□□□□□ -1.92
VPS16YPL045W NOC3Q07896 663 aaPredicted RBP3.09□□□□□ -1.92
VPS16YPL045W YOR131CQ12486 218 aa3.09□□□□□ -1.92
VPS16YPL045W KIP2P28743 706 aa3.08□□□□□ -1.92
VPS16YPL045W FBP26P32604 452 aa3.08□□□□□ -1.92
VPS16YPL045W CIC1P38779 376 aaKnown RBP3.08□□□□□ -1.92
VPS16YPL045W BSC2Q05611 235 aa3.08□□□□□ -1.92
VPS16YPL045W DAT1P13483 248 aaKnown RBP3.08□□□□□ -1.92
VPS16YPL045W PTC2P39966 464 aaKnown RBP3.08□□□□□ -1.92
VPS16YPL045W POB3Q04636 552 aaKnown RBP3.08□□□□□ -1.92
VPS16YPL045W SAP30P38429 201 aa3.07□□□□□ -1.92
VPS16YPL045W HXT8P40886 569 aa3.07□□□□□ -1.92
VPS16YPL045W HUL5P53119 910 aa3.07□□□□□ -1.92
VPS16YPL045W GDE1Q02979 1223 aa3.07□□□□□ -1.92
VPS16YPL045W YPQ2Q06328 317 aa3.07□□□□□ -1.92
VPS16YPL045W MET6P05694 767 aaKnown RBP3.07□□□□□ -1.92
VPS16YPL045W VMA3P25515 160 aa3.07□□□□□ -1.92
VPS16YPL045W GRX4P32642 244 aa3.07□□□□□ -1.92
VPS16YPL045W SMC1P32908 1225 aa3.07□□□□□ -1.92
VPS16YPL045W TBS1P38114 1094 aa3.07□□□□□ -1.92
VPS16YPL045W FAA4P47912 694 aaKnown RBP3.07□□□□□ -1.92
VPS16YPL045W PRE9P23638 258 aaKnown RBP3.06□□□□□ -1.92
VPS16YPL045W SCD5P34758 872 aa3.06□□□□□ -1.92
VPS16YPL045W SPT23P35210 1082 aa3.06□□□□□ -1.92
VPS16YPL045W MNN1P39106 762 aa3.06□□□□□ -1.92
VPS16YPL045W MRPS18P42847 217 aa3.06□□□□□ -1.92
VPS16YPL045W YGR053CP53234 283 aa3.06□□□□□ -1.92
VPS16YPL045W DAL4Q04895 635 aa3.06□□□□□ -1.92
VPS16YPL045W INP54Q08227 384 aaKnown RBP3.06□□□□□ -1.92
VPS16YPL045W PPM2Q08282 695 aa3.06□□□□□ -1.92
VPS16YPL045W SSB1P11484 613 aaKnown RBP3.05□□□□□ -1.92
VPS16YPL045W MCM1P11746 286 aa3.05□□□□□ -1.92
VPS16YPL045W STE6P12866 1290 aa3.05□□□□□ -1.92
VPS16YPL045W CDC34P14682 295 aa3.05□□□□□ -1.92
VPS16YPL045W YHL008CP38750 627 aa3.05□□□□□ -1.92
VPS16YPL045W SSB2P40150 613 aaKnown RBP3.05□□□□□ -1.92
VPS16YPL045W NUP82P40368 713 aa3.05□□□□□ -1.92
VPS16YPL045W YML082WQ04533 649 aaKnown RBP3.05□□□□□ -1.92
VPS16YPL045W MCD1Q12158 566 aa3.05□□□□□ -1.92
VPS16YPL045W WTM2Q12206 467 aa3.05□□□□□ -1.92
VPS16YPL045W RAD4P14736 754 aa3.05□□□□□ -1.92
VPS16YPL045W PRI2P20457 528 aa3.05□□□□□ -1.92
VPS16YPL045W MKS1P34072 584 aa3.05□□□□□ -1.92
VPS16YPL045W RAD55P38953 406 aa3.05□□□□□ -1.92
VPS16YPL045W RGD2P43556 714 aa3.05□□□□□ -1.92
VPS16YPL045W YJR142WP47173 342 aa3.05□□□□□ -1.92
VPS16YPL045W SYH1Q02875 849 aaKnown RBP3.05□□□□□ -1.92
VPS16YPL045W PUS5Q06244 254 aa3.05□□□□□ -1.92
VPS16YPL045W BMT6Q12291 365 aa3.05□□□□□ -1.92
VPS16YPL045W YGR161W-CQ3E744 92 aa3.05□□□□□ -1.92
VPS16YPL045W DUT1P33317 147 aa3.04□□□□□ -1.92
VPS16YPL045W YHR020WP38708 688 aaKnown RBP3.04□□□□□ -1.92
VPS16YPL045W UTP7P40055 554 aaKnown RBP3.04□□□□□ -1.92
VPS16YPL045W NTA1P40354 457 aa3.04□□□□□ -1.92
VPS16YPL045W SUM1P46676 1062 aa3.04□□□□□ -1.92
VPS16YPL045W YCS4Q06156 1176 aa3.04□□□□□ -1.92
VPS16YPL045W OPI10Q08202 246 aa3.04□□□□□ -1.92
VPS16YPL045W MSN1P22148 382 aa3.04□□□□□ -1.92
VPS16YPL045W UGA4P32837 571 aa3.04□□□□□ -1.92
VPS16YPL045W TIM23P32897 222 aa3.04□□□□□ -1.92
VPS16YPL045W PRP40P33203 583 aaKnown RBP3.04□□□□□ -1.92
VPS16YPL045W YKL069WP36088 180 aa3.04□□□□□ -1.92
VPS16YPL045W LDH1P38139 375 aa3.04□□□□□ -1.92
VPS16YPL045W SPF1P39986 1215 aaKnown RBP3.04□□□□□ -1.92
VPS16YPL045W TDA5Q06417 326 aaKnown RBP3.04□□□□□ -1.92
VPS16YPL045W TIF6Q12522 245 aaKnown RBP3.04□□□□□ -1.92
VPS16YPL045W Q0182Q9ZZW1 134 aa3.04□□□□□ -1.92
VPS16YPL045W SWE1P32944 819 aa3.03□□□□□ -1.92
VPS16YPL045W IRS4P36115 615 aaKnown RBP3.03□□□□□ -1.92
VPS16YPL045W PSY2P40164 858 aa3.03□□□□□ -1.92
VPS16YPL045W TIM54P47045 478 aa3.03□□□□□ -1.92
VPS16YPL045W YNL165WP53891 406 aa3.03□□□□□ -1.92
VPS16YPL045W UTP14Q04500 899 aaKnown RBP3.03□□□□□ -1.92
VPS16YPL045W UTP4Q06679 776 aaKnown RBP3.03□□□□□ -1.92
VPS16YPL045W FLP1P03870 423 aa3.03□□□□□ -1.92
VPS16YPL045W PHO8P11491 566 aa3.03□□□□□ -1.92
VPS16YPL045W YBL086CP38177 466 aa3.03□□□□□ -1.92
VPS16YPL045W DYS1P38791 387 aa3.03□□□□□ -1.92
VPS16YPL045W CHZ1P40019 153 aaPredicted RBP3.03□□□□□ -1.92
VPS16YPL045W FIR1P40020 876 aa3.03□□□□□ -1.92
VPS16YPL045W YGL081WP53156 320 aa3.03□□□□□ -1.92
VPS16YPL045W TYW3P53177 273 aa3.03□□□□□ -1.92
VPS16YPL045W NAN1Q02931 896 aaKnown RBP3.03□□□□□ -1.92
VPS16YPL045W YPL109CQ02981 657 aa3.03□□□□□ -1.92
VPS16YPL045W SAS4Q04003 481 aa3.03□□□□□ -1.92
VPS16YPL045W DFG5Q05031 458 aa3.03□□□□□ -1.92
VPS16YPL045W CCP1P00431 361 aa3.02□□□□□ -1.93
VPS16YPL045W RPP2BP02400 110 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 91.3 ms