RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeastyeast

Gene RET3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RET3YPL010W DPH6Q12429 685 aa6.26□□□□□ -1.41
RET3YPL010W PDR15Q04182 1529 aaKnown RBP6.25□□□□□ -1.41
RET3YPL010W ISF1P32488 338 aa6.25□□□□□ -1.41
RET3YPL010W LYS5P50113 272 aa6.25□□□□□ -1.41
RET3YPL010W MSN5P52918 1224 aa6.25□□□□□ -1.41
RET3YPL010W WTM2Q12206 467 aa6.25□□□□□ -1.41
RET3YPL010W BNR1P40450 1375 aa6.23□□□□□ -1.41
RET3YPL010W UTR2P32623 467 aa6.23□□□□□ -1.41
RET3YPL010W NAM8Q00539 523 aaKnown RBP6.23□□□□□ -1.41
RET3YPL010W HAL5P38970 855 aaKnown RBP6.22□□□□□ -1.41
RET3YPL010W SSN3P39073 555 aa6.22□□□□□ -1.41
RET3YPL010W ENO2P00925 437 aaKnown RBP6.21□□□□□ -1.42
RET3YPL010W SLA1P32790 1244 aa6.21□□□□□ -1.42
RET3YPL010W TBS1P38114 1094 aa6.21□□□□□ -1.42
RET3YPL010W HGH1P48362 394 aaKnown RBP6.21□□□□□ -1.42
RET3YPL010W RIM21P48565 533 aa6.21□□□□□ -1.42
RET3YPL010W YPR204WQ08995 1032 aa6.21□□□□□ -1.42
RET3YPL010W JJJ3P47138 172 aa6.2□□□□□ -1.42
RET3YPL010W UBP15P50101 1230 aa6.2□□□□□ -1.42
RET3YPL010W YNL108CP53929 270 aa6.2□□□□□ -1.42
RET3YPL010W DAT1P13483 248 aaKnown RBP6.19□□□□□ -1.42
RET3YPL010W SOH1P38633 127 aa6.19□□□□□ -1.42
RET3YPL010W SLX8P40072 274 aa6.19□□□□□ -1.42
RET3YPL010W LEO1P38439 464 aa6.18□□□□□ -1.42
RET3YPL010W SUM1P46676 1062 aa6.18□□□□□ -1.42
RET3YPL010W HDA3Q06623 655 aa6.18□□□□□ -1.42
RET3YPL010W ARO1P08566 1588 aaKnown RBP6.18□□□□□ -1.42
RET3YPL010W CAT8P39113 1433 aa6.17□□□□□ -1.42
RET3YPL010W MLP2P40457 1679 aa6.17□□□□□ -1.42
RET3YPL010W TY3B-GQ99315 1547 aa6.16□□□□□ -1.42
RET3YPL010W RDS2P19541 446 aaKnown RBP6.16□□□□□ -1.42
RET3YPL010W YJL007CP47080 104 aa6.16□□□□□ -1.42
RET3YPL010W CUZ1P53899 274 aa6.16□□□□□ -1.42
RET3YPL010W MRX10Q05648 414 aa6.16□□□□□ -1.42
RET3YPL010W TY1A-DR3Q12441 440 aa6.15□□□□□ -1.42
RET3YPL010W DNF3Q12674 1656 aa6.14□□□□□ -1.43
RET3YPL010W AHP1P38013 176 aaKnown RBP6.14□□□□□ -1.43
RET3YPL010W BIM1P40013 344 aa6.14□□□□□ -1.43
RET3YPL010W DIT1P21623 536 aa6.13□□□□□ -1.43
RET3YPL010W ICP55P40051 511 aa6.13□□□□□ -1.43
RET3YPL010W YDR461C-AQ2V2P7 80 aa6.13□□□□□ -1.43
RET3YPL010W YSP2Q06681 1438 aa6.13□□□□□ -1.43
RET3YPL010W CEM1P39525 442 aa6.12□□□□□ -1.43
RET3YPL010W UTP7P40055 554 aaKnown RBP6.12□□□□□ -1.43
RET3YPL010W YFL034WP43564 1073 aa6.12□□□□□ -1.43
RET3YPL010W YPQ2Q06328 317 aa6.12□□□□□ -1.43
RET3YPL010W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
RET3YPL010W TIF1P10081 395 aaKnown RBP6.11□□□□□ -1.43
RET3YPL010W IPL1P38991 367 aa6.11□□□□□ -1.43
RET3YPL010W ATG32P40458 529 aa6.11□□□□□ -1.43
RET3YPL010W THI12P42883 340 aa6.11□□□□□ -1.43
RET3YPL010W THI5P43534 340 aa6.11□□□□□ -1.43
RET3YPL010W JJJ2P46997 583 aa6.11□□□□□ -1.43
RET3YPL010W THI11P47183 340 aa6.11□□□□□ -1.43
RET3YPL010W SYT1Q06836 1226 aa6.11□□□□□ -1.43
RET3YPL010W THI13Q07748 340 aa6.11□□□□□ -1.43
RET3YPL010W IRE1P32361 1115 aa6.1□□□□□ -1.43
RET3YPL010W PEP12P32854 288 aa6.1□□□□□ -1.43
RET3YPL010W YMR265CQ03508 461 aaKnown RBP6.1□□□□□ -1.43
RET3YPL010W PHM7Q12252 991 aa6.1□□□□□ -1.43
RET3YPL010W ENO1P00924 437 aaKnown RBP6.09□□□□□ -1.43
RET3YPL010W SWI5P08153 709 aa6.09□□□□□ -1.43
RET3YPL010W MCM1P11746 286 aa6.09□□□□□ -1.43
RET3YPL010W AIM9P40053 627 aaKnown RBP6.09□□□□□ -1.43
RET3YPL010W ALA1P40825 983 aaKnown RBP6.09□□□□□ -1.43
RET3YPL010W CHC1P22137 1653 aaKnown RBP6.09□□□□□ -1.43
RET3YPL010W GEA1P47102 1408 aaPredicted RBP6.08□□□□□ -1.44
RET3YPL010W SEC7P11075 2009 aaKnown RBP6.08□□□□□ -1.44
RET3YPL010W RTG2P32608 588 aaKnown RBP6.07□□□□□ -1.44
RET3YPL010W SHM1P37292 490 aaPredicted RBP6.07□□□□□ -1.44
RET3YPL010W RPL34BP40525 121 aaKnown RBP6.07□□□□□ -1.44
RET3YPL010W KRE33P53914 1056 aaKnown RBP6.07□□□□□ -1.44
RET3YPL010W TSC13Q99190 310 aa6.07□□□□□ -1.44
RET3YPL010W AI1P03875 834 aa6.06□□□□□ -1.44
RET3YPL010W PUS1Q12211 544 aaKnown RBP6.06□□□□□ -1.44
RET3YPL010W RPS31P05759 152 aaKnown RBP6.05□□□□□ -1.44
RET3YPL010W RPS6AP0CX37 236 aaKnown RBP6.05□□□□□ -1.44
RET3YPL010W RPS6BP0CX38 236 aaPredicted RBP6.05□□□□□ -1.44
RET3YPL010W PDC6P26263 563 aaKnown RBP6.05□□□□□ -1.44
RET3YPL010W SIS2P36024 562 aa6.05□□□□□ -1.44
RET3YPL010W YFL066CP43538 392 aa6.05□□□□□ -1.44
RET3YPL010W BUD21Q08492 214 aaPredicted RBP6.05□□□□□ -1.44
RET3YPL010W PSH1Q12161 406 aa6.05□□□□□ -1.44
RET3YPL010W ADE12P80210 433 aaKnown RBP6.04□□□□□ -1.44
RET3YPL010W LEU1P07264 779 aaKnown RBP6.03□□□□□ -1.44
RET3YPL010W NTH2P35172 780 aa6.03□□□□□ -1.44
RET3YPL010W TYS1P36421 394 aaKnown RBP6.02□□□□□ -1.45
RET3YPL010W MDJ1P35191 511 aa6.01□□□□□ -1.45
RET3YPL010W SRB8P25648 1427 aa6□□□□□ -1.45
RET3YPL010W HAP1P0CE41 1502 aa6□□□□□ -1.45
RET3YPL010W RPP1AP05318 106 aaPredicted RBP6□□□□□ -1.45
RET3YPL010W PDI1P17967 522 aaKnown RBP6□□□□□ -1.45
RET3YPL010W FPS1P23900 669 aa6□□□□□ -1.45
RET3YPL010W PHO87P25360 923 aa6□□□□□ -1.45
RET3YPL010W MRPL16P38064 232 aa6□□□□□ -1.45
RET3YPL010W SPR3P41901 512 aa6□□□□□ -1.45
RET3YPL010W LSB3P43603 459 aaKnown RBP6□□□□□ -1.45
RET3YPL010W NSG2P53898 299 aa6□□□□□ -1.45
RET3YPL010W GPM1P00950 247 aaKnown RBP5.99□□□□□ -1.45
RET3YPL010W UBP1P25037 809 aa5.99□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms