RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C THI13Q07748 340 aa4.24□□□□□ -1.73
RPB11YOL005C TRL1P09880 827 aaKnown RBP4.23□□□□□ -1.73
RPB11YOL005C STM1P39015 273 aaKnown RBP4.23□□□□□ -1.73
RPB11YOL005C HXT8P40886 569 aa4.23□□□□□ -1.73
RPB11YOL005C SPR3P41901 512 aa4.23□□□□□ -1.73
RPB11YOL005C MDJ2P42834 146 aa4.23□□□□□ -1.73
RPB11YOL005C TY1A-MR1Q04215 440 aa4.23□□□□□ -1.73
RPB11YOL005C LEU1P07264 779 aaKnown RBP4.22□□□□□ -1.73
RPB11YOL005C RGP1P16664 663 aa4.22□□□□□ -1.73
RPB11YOL005C BSD2P38356 321 aa4.22□□□□□ -1.73
RPB11YOL005C ACF4P47129 309 aa4.22□□□□□ -1.73
RPB11YOL005C ALD2P47771 506 aa4.22□□□□□ -1.73
RPB11YOL005C CUZ1P53899 274 aa4.22□□□□□ -1.73
RPB11YOL005C CUS1Q02554 436 aaPredicted RBP4.22□□□□□ -1.73
RPB11YOL005C IPL1P38991 367 aa4.21□□□□□ -1.74
RPB11YOL005C KRE33P53914 1056 aaKnown RBP4.21□□□□□ -1.74
RPB11YOL005C DIT1P21623 536 aa4.2□□□□□ -1.74
RPB11YOL005C MSN1P22148 382 aa4.2□□□□□ -1.74
RPB11YOL005C FPS1P23900 669 aa4.2□□□□□ -1.74
RPB11YOL005C SMC1P32908 1225 aa4.2□□□□□ -1.74
RPB11YOL005C GIP1P38229 639 aa4.2□□□□□ -1.74
RPB11YOL005C RAD55P38953 406 aa4.2□□□□□ -1.74
RPB11YOL005C CEM1P39525 442 aa4.2□□□□□ -1.74
RPB11YOL005C ACO2P39533 789 aa4.2□□□□□ -1.74
RPB11YOL005C ADE12P80210 433 aaKnown RBP4.2□□□□□ -1.74
RPB11YOL005C NUT2Q06213 157 aa4.2□□□□□ -1.74
RPB11YOL005C NOP8Q08287 484 aaPredicted RBP4.2□□□□□ -1.74
RPB11YOL005C APC11Q12157 165 aa4.2□□□□□ -1.74
RPB11YOL005C SEC20P28791 383 aa4.19□□□□□ -1.74
RPB11YOL005C ISW1P38144 1129 aa4.19□□□□□ -1.74
RPB11YOL005C NCL1P38205 684 aaKnown RBP4.19□□□□□ -1.74
RPB11YOL005C UFD2P54860 961 aa4.19□□□□□ -1.74
RPB11YOL005C TRS120Q04183 1289 aa4.19□□□□□ -1.74
RPB11YOL005C YOR296WQ08748 1289 aa4.19□□□□□ -1.74
RPB11YOL005C FRT1Q99332 602 aa4.19□□□□□ -1.74
RPB11YOL005C RPP1AP05318 106 aaPredicted RBP4.18□□□□□ -1.74
RPB11YOL005C RPC31P17890 251 aa4.18□□□□□ -1.74
RPB11YOL005C NAB2P32505 525 aaKnown RBP RIP-Chip data4.18□□□□□ -1.74not detected
RPB11YOL005C KTR2P33550 425 aa4.18□□□□□ -1.74
RPB11YOL005C YBR287WP38355 427 aa4.18□□□□□ -1.74
RPB11YOL005C APM2P38700 605 aa4.18□□□□□ -1.74
RPB11YOL005C SEN54Q02825 467 aaPredicted RBP4.18□□□□□ -1.74
RPB11YOL005C MSC6Q08818 692 aaKnown RBP4.18□□□□□ -1.74
RPB11YOL005C CCP1P00431 361 aa4.17□□□□□ -1.74
RPB11YOL005C RGD2P43556 714 aa4.17□□□□□ -1.74
RPB11YOL005C YNR040WP53736 256 aa4.17□□□□□ -1.74
RPB11YOL005C YDL176WQ12027 708 aa4.17□□□□□ -1.74
RPB11YOL005C AIM46P38885 310 aa4.16□□□□□ -1.74
RPB11YOL005C PSY2P40164 858 aa4.16□□□□□ -1.74
RPB11YOL005C WHI5Q12416 295 aa4.16□□□□□ -1.74
RPB11YOL005C TIF6Q12522 245 aaKnown RBP4.16□□□□□ -1.74
RPB11YOL005C IRS4P36115 615 aaKnown RBP4.15□□□□□ -1.75
RPB11YOL005C PPX1P38698 397 aa4.15□□□□□ -1.75
RPB11YOL005C NTA1P40354 457 aa4.15□□□□□ -1.75
RPB11YOL005C YJL181WP46987 611 aa4.15□□□□□ -1.75
RPB11YOL005C SKP1P52286 194 aa4.15□□□□□ -1.75
RPB11YOL005C ITC1P53125 1264 aa4.15□□□□□ -1.75
RPB11YOL005C YGR035CP53222 116 aa4.15□□□□□ -1.75
RPB11YOL005C ECM2P38241 364 aaKnown RBP4.14□□□□□ -1.75
RPB11YOL005C YNL011CP53980 444 aa4.14□□□□□ -1.75
RPB11YOL005C HPF1Q05164 967 aa4.14□□□□□ -1.75
RPB11YOL005C SYT1Q06836 1226 aa4.14□□□□□ -1.75
RPB11YOL005C HEM3P28789 327 aa4.13□□□□□ -1.75
RPB11YOL005C YHL008CP38750 627 aa4.13□□□□□ -1.75
RPB11YOL005C YIL165CP40446 119 aa4.13□□□□□ -1.75
RPB11YOL005C POL32P47110 350 aa4.13□□□□□ -1.75
RPB11YOL005C LYS5P50113 272 aa4.13□□□□□ -1.75
RPB11YOL005C HEH2Q03281 663 aa4.13□□□□□ -1.75
RPB11YOL005C BSC2Q05611 235 aa4.13□□□□□ -1.75
RPB11YOL005C EMG1Q06287 252 aaKnown RBP4.13□□□□□ -1.75
RPB11YOL005C GPI13Q07830 1017 aa4.13□□□□□ -1.75
RPB11YOL005C YDR461C-AQ2V2P7 80 aa4.13□□□□□ -1.75
RPB11YOL005C SAM37P50110 327 aa4.12□□□□□ -1.75
RPB11YOL005C PPT1P53043 513 aa4.12□□□□□ -1.75
RPB11YOL005C CDC55Q00362 526 aa4.12□□□□□ -1.75
RPB11YOL005C MET4P32389 672 aa4.11□□□□□ -1.75
RPB11YOL005C MSC7P38694 644 aa4.11□□□□□ -1.75
RPB11YOL005C TY1A-DR2Q03964 440 aaKnown RBP4.11□□□□□ -1.75
RPB11YOL005C RSC2Q06488 889 aa4.11□□□□□ -1.75
RPB11YOL005C NOC3Q07896 663 aaPredicted RBP4.11□□□□□ -1.75
RPB11YOL005C INP54Q08227 384 aaKnown RBP4.11□□□□□ -1.75
RPB11YOL005C MNL2Q12205 849 aa4.11□□□□□ -1.75
RPB11YOL005C IDI1P15496 288 aa4.1□□□□□ -1.75
RPB11YOL005C GCD6P32501 712 aaKnown RBP4.1□□□□□ -1.75
RPB11YOL005C RPT1P33299 467 aaKnown RBP4.1□□□□□ -1.75
RPB11YOL005C MGE1P38523 228 aa4.1□□□□□ -1.75
RPB11YOL005C CIC1P38779 376 aaKnown RBP4.1□□□□□ -1.75
RPB11YOL005C PRK1P40494 810 aa4.1□□□□□ -1.75
RPB11YOL005C RSC4Q02206 625 aa4.1□□□□□ -1.75
RPB11YOL005C PYC2P32327 1180 aaKnown RBP4.09□□□□□ -1.75
RPB11YOL005C OXR1Q08952 273 aa4.09□□□□□ -1.75
RPB11YOL005C DPH6Q12429 685 aa4.09□□□□□ -1.75
RPB11YOL005C MRP10O75012 95 aa4.08□□□□□ -1.76
RPB11YOL005C ASF1P32447 279 aa4.08□□□□□ -1.76
RPB11YOL005C YER156CP40093 338 aaKnown RBP4.08□□□□□ -1.76
RPB11YOL005C DAK2P43550 591 aa4.08□□□□□ -1.76
RPB11YOL005C JJJ3P47138 172 aa4.08□□□□□ -1.76
RPB11YOL005C YPL062WQ02781 134 aa4.08□□□□□ -1.76
RPB11YOL005C GPM1P00950 247 aaKnown RBP4.07□□□□□ -1.76
RPB11YOL005C PHO4P07270 312 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 103.4 ms