RNA–Protein interactions for RNA: YNR017W

TIM23, Transcript of Essential component of the TIM23 complex, yeast

Gene TIM23, Length 669 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIM23	YNR017W	TOS4	Q06266	489 aa		13.37	□□□□□ -0.27
TIM23	YNR017W	YLR278C	Q05854	1341 aa		13.37	□□□□□ -0.27
TIM23	YNR017W	THS1	P04801	734 aa	Known RBP	13.36	□□□□□ -0.27
TIM23	YNR017W	PIF1	P07271	859 aa		13.36	□□□□□ -0.27
TIM23	YNR017W	YGL242C	P53066	181 aa		13.36	□□□□□ -0.27
TIM23	YNR017W	RPN7	Q06103	429 aa	Known RBP	13.36	□□□□□ -0.27
TIM23	YNR017W	RTG2	P32608	588 aa	Known RBP	13.35	□□□□□ -0.27
TIM23	YNR017W	JJJ2	P46997	583 aa		13.35	□□□□□ -0.27
TIM23	YNR017W	CRF1	Q04930	467 aa		13.35	□□□□□ -0.27
TIM23	YNR017W	GLC3	P32775	704 aa		13.34	□□□□□ -0.27
TIM23	YNR017W	KTR3	P38130	404 aa	Predicted RBP	13.34	□□□□□ -0.27
TIM23	YNR017W	HAL5	P38970	855 aa	Known RBP	13.34	□□□□□ -0.27
TIM23	YNR017W	MLC1	P53141	149 aa		13.34	□□□□□ -0.27
TIM23	YNR017W	TIM50	Q02776	476 aa		13.34	□□□□□ -0.27
TIM23	YNR017W	WRS1	Q12109	432 aa	Known RBP	13.34	□□□□□ -0.27
TIM23	YNR017W	PDR18	P53756	1333 aa		13.34	□□□□□ -0.27
TIM23	YNR017W	NOT3	P06102	836 aa	Known RBP	13.33	□□□□□ -0.28
TIM23	YNR017W	ARG82	P07250	355 aa		13.33	□□□□□ -0.28
TIM23	YNR017W	GAP1	P19145	602 aa	Predicted RBP	13.33	□□□□□ -0.28
TIM23	YNR017W	FET4	P40988	552 aa		13.33	□□□□□ -0.28
TIM23	YNR017W	TRM44	Q02648	567 aa	Known RBP	13.33	□□□□□ -0.28
TIM23	YNR017W	FLO11	P08640	1367 aa		13.32	□□□□□ -0.28
TIM23	YNR017W	ECM21	P38167	1117 aa	Known RBP	13.32	□□□□□ -0.28
TIM23	YNR017W	RFC1	P38630	861 aa	Known RBP	13.32	□□□□□ -0.28
TIM23	YNR017W	YFH7	P43591	353 aa		13.32	□□□□□ -0.28
TIM23	YNR017W	ECM16	Q04217	1267 aa	Known RBP	13.32	□□□□□ -0.28
TIM23	YNR017W	YIR042C	P40586	236 aa		13.31	□□□□□ -0.28
TIM23	YNR017W	INM2	Q05533	292 aa		13.31	□□□□□ -0.28
TIM23	YNR017W	GSC2	P40989	1895 aa		13.3	□□□□□ -0.28
TIM23	YNR017W	CDC16	P09798	840 aa		13.3	□□□□□ -0.28
TIM23	YNR017W	RPT3	P33298	428 aa	Known RBP	13.3	□□□□□ -0.28
TIM23	YNR017W	VPS4	P52917	437 aa		13.3	□□□□□ -0.28
TIM23	YNR017W	ALO1	P54783	526 aa	Known RBP	13.3	□□□□□ -0.28
TIM23	YNR017W	RPS7A	P26786	190 aa	Known RBP	13.29	□□□□□ -0.28
TIM23	YNR017W	STV1	P37296	890 aa		13.29	□□□□□ -0.28
TIM23	YNR017W	YGR117C	P53270	476 aa		13.29	□□□□□ -0.28
TIM23	YNR017W	SEN54	Q02825	467 aa	Predicted RBP	13.29	□□□□□ -0.28
TIM23	YNR017W	NKP2	Q06162	153 aa		13.29	□□□□□ -0.28
TIM23	YNR017W	ACK1	Q07622	623 aa	Predicted RBP	13.29	□□□□□ -0.28
TIM23	YNR017W	AIM7	Q12156	149 aa		13.29	□□□□□ -0.28
TIM23	YNR017W	PTK1	P36002	662 aa	Predicted RBP	13.27	□□□□□ -0.29
TIM23	YNR017W	HPR1	P17629	752 aa	Known RBP	13.26	□□□□□ -0.29
TIM23	YNR017W	EPS1	P40557	701 aa		13.26	□□□□□ -0.29
TIM23	YNR017W	EMP47	P43555	445 aa		13.26	□□□□□ -0.29
TIM23	YNR017W	CYB2	P00175	591 aa		13.24	□□□□□ -0.29
TIM23	YNR017W	SNF3	P10870	884 aa		13.24	□□□□□ -0.29
TIM23	YNR017W	PUS6	P53294	404 aa		13.24	□□□□□ -0.29
TIM23	YNR017W	RMD1	Q03441	430 aa		13.24	□□□□□ -0.29
TIM23	YNR017W	BRE1	Q07457	700 aa	Known RBP	13.24	□□□□□ -0.29
TIM23	YNR017W	MDL2	P33311	773 aa		13.23	□□□□□ -0.29
TIM23	YNR017W	APL6	P46682	809 aa		13.22	□□□□□ -0.29
TIM23	YNR017W	MRPS35	P53292	345 aa		13.22	□□□□□ -0.29
TIM23	YNR017W	RAD50	P12753	1312 aa		13.21	□□□□□ -0.29
TIM23	YNR017W	BOI1	P38041	980 aa	Known RBP	13.21	□□□□□ -0.29
TIM23	YNR017W	GRX7	P38068	203 aa		13.21	□□□□□ -0.29
TIM23	YNR017W	PBY1	P38254	753 aa		13.21	□□□□□ -0.29
TIM23	YNR017W	VHR2	P40041	505 aa		13.21	□□□□□ -0.29
TIM23	YNR017W	UTP7	P40055	554 aa	Known RBP	13.21	□□□□□ -0.29
TIM23	YNR017W	YJL171C	P46992	396 aa		13.21	□□□□□ -0.29
TIM23	YNR017W	MTC3	P53077	123 aa		13.21	□□□□□ -0.29
TIM23	YNR017W	PIB2	P53191	635 aa		13.21	□□□□□ -0.29
TIM23	YNR017W	FLO1	P32768	1537 aa		13.21	□□□□□ -0.29
TIM23	YNR017W	OSH3	P38713	996 aa	Known RBP	13.2	□□□□□ -0.3
TIM23	YNR017W	KTR1	P27810	393 aa	Known RBP	13.19	□□□□□ -0.3
TIM23	YNR017W	NPL4	P33755	580 aa		13.19	□□□□□ -0.3
TIM23	YNR017W	GEF1	P37020	779 aa		13.19	□□□□□ -0.3
TIM23	YNR017W	PEA2	P40091	420 aa		13.19	□□□□□ -0.3
TIM23	YNR017W	YMR147W	P40218	223 aa	Known RBP	13.19	□□□□□ -0.3
TIM23	YNR017W	DUS1	P53759	423 aa	Known RBP	13.19	□□□□□ -0.3
TIM23	YNR017W	CBP1	P07252	654 aa		13.18	□□□□□ -0.3
TIM23	YNR017W	PIP2	P52960	996 aa		13.17	□□□□□ -0.3
TIM23	YNR017W	TOM1	Q03280	3268 aa		13.17	□□□□□ -0.3
TIM23	YNR017W	IRC8	P47046	822 aa		13.16	□□□□□ -0.3
TIM23	YNR017W	ENP2	P48234	707 aa	Known RBP	13.16	□□□□□ -0.3
TIM23	YNR017W	STM1	P39015	273 aa	Known RBP	13.15	□□□□□ -0.3
TIM23	YNR017W	IOC3	P43596	787 aa		13.15	□□□□□ -0.3
TIM23	YNR017W	AAD16	Q02895	342 aa		13.15	□□□□□ -0.3
TIM23	YNR017W	CWC15	Q03772	175 aa	Known RBP	13.15	□□□□□ -0.3
TIM23	YNR017W	KAR5	Q04746	504 aa		13.15	□□□□□ -0.3
TIM23	YNR017W	VAS1	P07806	1104 aa	Known RBP	13.14	□□□□□ -0.31
TIM23	YNR017W	BBC1	P47068	1157 aa		13.14	□□□□□ -0.31
TIM23	YNR017W	NSG2	P53898	299 aa		13.14	□□□□□ -0.31
TIM23	YNR017W	RIM20	Q12033	661 aa		13.14	□□□□□ -0.31
TIM23	YNR017W	ETP1	P38748	585 aa	Known RBP	13.13	□□□□□ -0.31
TIM23	YNR017W	NIT1	P40447	199 aa		13.13	□□□□□ -0.31
TIM23	YNR017W	YIL089W	P40500	205 aa		13.13	□□□□□ -0.31
TIM23	YNR017W	OPI1	P21957	404 aa		13.12	□□□□□ -0.31
TIM23	YNR017W	NOP2	P40991	618 aa	Known RBP	13.12	□□□□□ -0.31
TIM23	YNR017W	PKH3	Q03306	898 aa	Predicted RBP	13.12	□□□□□ -0.31
TIM23	YNR017W	TAH18	Q12181	623 aa		13.12	□□□□□ -0.31
TIM23	YNR017W	LAM4	P38800	1345 aa		13.12	□□□□□ -0.31
TIM23	YNR017W	PCL8	Q08966	492 aa		13.1	□□□□□ -0.31
TIM23	YNR017W	GAL2	P13181	574 aa		13.09	□□□□□ -0.31
TIM23	YNR017W	AAP1	P37898	856 aa	Known RBP	13.09	□□□□□ -0.31
TIM23	YNR017W	FPR4	Q06205	392 aa	Predicted RBP	13.09	□□□□□ -0.31
TIM23	YNR017W	TYW1	Q08960	810 aa	Known RBP	13.09	□□□□□ -0.31
TIM23	YNR017W	CSR2	Q12734	1121 aa		13.09	□□□□□ -0.31
TIM23	YNR017W	ADP1	P25371	1049 aa		13.08	□□□□□ -0.32
TIM23	YNR017W	BRN1	P38170	754 aa		13.08	□□□□□ -0.32
TIM23	YNR017W	MSH4	P40965	878 aa	Predicted RBP	13.08	□□□□□ -0.32

Retrieved 100 of 5,963 RNA–protein pairs in 77.4 ms