RNA–Protein interactions for RNA: YNL339C

YRF1-6, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-6, Length 5,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-6YNL339C REB1P21538 810 aa8.89□□□□□ -0.99
YRF1-6YNL339C BRN1P38170 754 aa8.89□□□□□ -0.99
YRF1-6YNL339C VPS45P38932 577 aa8.89□□□□□ -0.99
YRF1-6YNL339C APP1P53933 587 aa8.89□□□□□ -0.99
YRF1-6YNL339C TUF1P02992 437 aaKnown RBP8.89□□□□□ -0.99
YRF1-6YNL339C KTR1P27810 393 aaKnown RBP8.89□□□□□ -0.99
YRF1-6YNL339C MET1P36150 593 aa8.89□□□□□ -0.99
YRF1-6YNL339C YGR122WP53272 402 aa8.89□□□□□ -0.99
YRF1-6YNL339C NTE1Q04958 1679 aa8.89□□□□□ -0.99
YRF1-6YNL339C NUP145P49687 1317 aa8.89□□□□□ -0.99
YRF1-6YNL339C UBP12P39538 1254 aa8.88□□□□□ -0.99
YRF1-6YNL339C BDF2Q07442 638 aa8.88□□□□□ -0.99
YRF1-6YNL339C RVS167P39743 482 aaKnown RBP8.88□□□□□ -0.99
YRF1-6YNL339C CTF18P49956 741 aa8.88□□□□□ -0.99
YRF1-6YNL339C CLB1P24868 471 aa8.88□□□□□ -0.99
YRF1-6YNL339C RPC37P36121 282 aa8.88□□□□□ -0.99
YRF1-6YNL339C BOI2P39969 1040 aa8.88□□□□□ -0.99
YRF1-6YNL339C YPL260WQ08977 551 aa8.88□□□□□ -0.99
YRF1-6YNL339C HAT1Q12341 374 aa8.88□□□□□ -0.99
YRF1-6YNL339C BOI1P38041 980 aaKnown RBP8.87□□□□□ -0.99
YRF1-6YNL339C GFD1Q04839 188 aaKnown RBP8.87□□□□□ -0.99
YRF1-6YNL339C APT1P49435 187 aaKnown RBP8.87□□□□□ -0.99
YRF1-6YNL339C CDC48P25694 835 aaKnown RBP8.87□□□□□ -0.99
YRF1-6YNL339C SWD1P39706 426 aa8.87□□□□□ -0.99
YRF1-6YNL339C ATG19P35193 415 aa8.87□□□□□ -0.99
YRF1-6YNL339C SPN1Q06505 410 aaPredicted RBP8.87□□□□□ -0.99
YRF1-6YNL339C PDR11P40550 1411 aa8.87□□□□□ -0.99
YRF1-6YNL339C GCN2P15442 1659 aa8.87□□□□□ -0.99
YRF1-6YNL339C REI1P38344 393 aaPredicted RBP8.86□□□□□ -0.99
YRF1-6YNL339C YHL017WP38745 532 aa8.86□□□□□ -0.99
YRF1-6YNL339C SNU71P53207 620 aaKnown RBP8.86□□□□□ -0.99
YRF1-6YNL339C GDE1Q02979 1223 aa8.86□□□□□ -0.99
YRF1-6YNL339C TIP41Q12199 356 aa8.86□□□□□ -0.99
YRF1-6YNL339C YGL242CP53066 181 aa8.86□□□□□ -0.99
YRF1-6YNL339C UBP10P53874 792 aaPredicted RBP8.86□□□□□ -0.99
YRF1-6YNL339C YMR147WP40218 223 aaKnown RBP8.86□□□□□ -0.99
YRF1-6YNL339C MSH4P40965 878 aaPredicted RBP8.86□□□□□ -0.99
YRF1-6YNL339C COS5P47187 383 aa8.86□□□□□ -0.99
YRF1-6YNL339C VHS3Q08438 674 aa8.86□□□□□ -0.99
YRF1-6YNL339C RIM20Q12033 661 aa8.86□□□□□ -0.99
YRF1-6YNL339C RPN12P32496 274 aa8.86□□□□□ -0.99
YRF1-6YNL339C UBC6P33296 250 aaPredicted RBP8.86□□□□□ -0.99
YRF1-6YNL339C MTC5Q03897 1148 aa8.86□□□□□ -0.99
YRF1-6YNL339C DIT2P21595 489 aa8.85□□□□□ -0.99
YRF1-6YNL339C PDR12Q02785 1511 aa8.85□□□□□ -0.99
YRF1-6YNL339C NOT3P06102 836 aaKnown RBP8.85□□□□□ -0.99
YRF1-6YNL339C RRP43P25359 394 aaPredicted RBP8.85□□□□□ -0.99
YRF1-6YNL339C MRPL10P36520 322 aa8.85□□□□□ -0.99
YRF1-6YNL339C RRP6Q12149 733 aaKnown RBP8.85□□□□□ -0.99
YRF1-6YNL339C VMR1P38735 1592 aa8.84□□□□□ -0.99
YRF1-6YNL339C DEP1P31385 405 aa8.84□□□□□ -0.99
YRF1-6YNL339C YKL091CP33324 310 aaKnown RBP8.84□□□□□ -0.99
YRF1-6YNL339C STU2P46675 888 aa8.84□□□□□ -0.99
YRF1-6YNL339C JSN1P47135 1091 aaKnown RBP RIP-Chip data8.84□□□□□ -0.99not detected
YRF1-6YNL339C UTP5Q04177 643 aaKnown RBP8.84□□□□□ -0.99
YRF1-6YNL339C CDC11P32458 415 aa8.84□□□□□ -0.99
YRF1-6YNL339C JNM1P36224 373 aa8.84□□□□□ -0.99
YRF1-6YNL339C DPH6Q12429 685 aa8.84□□□□□ -0.99
YRF1-6YNL339C STO1P34160 861 aaKnown RBP8.84□□□□□ -0.99
YRF1-6YNL339C NUG1P40010 520 aaKnown RBP8.84□□□□□ -0.99
YRF1-6YNL339C RPA190P10964 1664 aaKnown RBP8.83□□□□□ -1
YRF1-6YNL339C SSK22P25390 1331 aaPredicted RBP8.83□□□□□ -1
YRF1-6YNL339C RPL8AP17076 256 aaKnown RBP8.83□□□□□ -1
YRF1-6YNL339C PEP3P27801 918 aa8.83□□□□□ -1
YRF1-6YNL339C YKL023WP36103 277 aaKnown RBP8.83□□□□□ -1
YRF1-6YNL339C OPY1P38271 328 aa8.83□□□□□ -1
YRF1-6YNL339C RPN11P43588 306 aaKnown RBP8.83□□□□□ -1
YRF1-6YNL339C ZRT2Q12436 422 aa8.83□□□□□ -1
YRF1-6YNL339C MAL31P38156 614 aa8.83□□□□□ -1
YRF1-6YNL339C CEX1Q12453 761 aa8.83□□□□□ -1
YRF1-6YNL339C HXT13P39924 564 aa8.83□□□□□ -1
YRF1-6YNL339C TIM50Q02776 476 aa8.83□□□□□ -1
YRF1-6YNL339C MSN5P52918 1224 aa8.82□□□□□ -1
YRF1-6YNL339C CLF1Q12309 687 aaPredicted RBP8.82□□□□□ -1
YRF1-6YNL339C RPL8BP29453 256 aaKnown RBP8.82□□□□□ -1
YRF1-6YNL339C EPL1P43572 832 aa8.82□□□□□ -1
YRF1-6YNL339C GRX6Q12438 231 aa8.82□□□□□ -1
YRF1-6YNL339C VPS35P34110 944 aa8.82□□□□□ -1
YRF1-6YNL339C OSH2Q12451 1283 aa8.82□□□□□ -1
YRF1-6YNL339C TRS33Q99394 268 aa8.82□□□□□ -1
YRF1-6YNL339C YNL193WP53870 558 aa8.82□□□□□ -1
YRF1-6YNL339C HOS3Q02959 697 aaKnown RBP8.82□□□□□ -1
YRF1-6YNL339C CBF2P32504 956 aa8.81□□□□□ -1
YRF1-6YNL339C OMS1Q06668 471 aa8.81□□□□□ -1
YRF1-6YNL339C TAH18Q12181 623 aa8.81□□□□□ -1
YRF1-6YNL339C PRP31P49704 494 aaPredicted RBP8.81□□□□□ -1
YRF1-6YNL339C ELG1Q12050 791 aa8.81□□□□□ -1
YRF1-6YNL339C MRF1P30775 413 aaPredicted RBP8.81□□□□□ -1
YRF1-6YNL339C FRD1P32614 470 aaKnown RBP8.81□□□□□ -1
YRF1-6YNL339C YDR341CQ05506 607 aaKnown RBP8.81□□□□□ -1
YRF1-6YNL339C PGA3Q12746 312 aaKnown RBP8.81□□□□□ -1
YRF1-6YNL339C SWI1P09547 1314 aa8.8□□□□□ -1
YRF1-6YNL339C SPT21P35209 758 aa8.8□□□□□ -1
YRF1-6YNL339C RPS19AP07280 144 aaKnown RBP8.8□□□□□ -1
YRF1-6YNL339C RPS19BP07281 144 aaPredicted RBP8.8□□□□□ -1
YRF1-6YNL339C INM2Q05533 292 aa8.8□□□□□ -1
YRF1-6YNL339C BYE1P36106 594 aa8.8□□□□□ -1
YRF1-6YNL339C HOS4P40480 1083 aa8.8□□□□□ -1
YRF1-6YNL339C TCB2P48231 1178 aa8.8□□□□□ -1
YRF1-6YNL339C PRP43P53131 767 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms