RNA–Protein interactions for RNA: YNL172W

APC1, Transcript of Largest subunit of the Anaphase-Promoting Complex/Cyclosome, yeast

Gene APC1, Length 5,247 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APC1	YNL172W	SNA3	P14359	133 aa		5.2	□□□□□ -1.58
APC1	YNL172W	TYW1	Q08960	810 aa	Known RBP	5.2	□□□□□ -1.58
APC1	YNL172W	FBP1	P09201	348 aa		5.2	□□□□□ -1.58
APC1	YNL172W	EMP47	P43555	445 aa		5.2	□□□□□ -1.58
APC1	YNL172W	YJR107W	P47145	328 aa		5.2	□□□□□ -1.58
APC1	YNL172W	YNL035C	P53962	389 aa	Known RBP	5.2	□□□□□ -1.58
APC1	YNL172W	FRD1	P32614	470 aa	Known RBP	5.2	□□□□□ -1.58
APC1	YNL172W	NUP133	P36161	1157 aa		5.2	□□□□□ -1.58
APC1	YNL172W	NMD2	P38798	1089 aa	Known RBP	5.2	□□□□□ -1.58
APC1	YNL172W	TUM1	Q08686	304 aa	Known RBP	5.2	□□□□□ -1.58
APC1	YNL172W	RMD1	Q03441	430 aa		5.2	□□□□□ -1.58
APC1	YNL172W	SKY1	Q03656	742 aa		5.2	□□□□□ -1.58
APC1	YNL172W	YBR287W	P38355	427 aa		5.19	□□□□□ -1.58
APC1	YNL172W	VPS45	P38932	577 aa		5.19	□□□□□ -1.58
APC1	YNL172W	UBP12	P39538	1254 aa		5.19	□□□□□ -1.58
APC1	YNL172W	RLF2	Q12495	606 aa		5.19	□□□□□ -1.58
APC1	YNL172W	ICL1	P28240	557 aa	Predicted RBP	5.19	□□□□□ -1.58
APC1	YNL172W	DID4	P36108	232 aa		5.19	□□□□□ -1.58
APC1	YNL172W	NPL4	P33755	580 aa		5.19	□□□□□ -1.58
APC1	YNL172W	GUA1	P38625	525 aa	Known RBP	5.19	□□□□□ -1.58
APC1	YNL172W	NOP2	P40991	618 aa	Known RBP	5.19	□□□□□ -1.58
APC1	YNL172W	ADE16	P54113	591 aa	Known RBP	5.19	□□□□□ -1.58
APC1	YNL172W	IOC4	Q04213	475 aa		5.19	□□□□□ -1.58
APC1	YNL172W	CSM3	Q04659	317 aa		5.19	□□□□□ -1.58
APC1	YNL172W	CBP1	P07252	654 aa		5.19	□□□□□ -1.58
APC1	YNL172W	YBL036C	P38197	257 aa		5.19	□□□□□ -1.58
APC1	YNL172W	PUS5	Q06244	254 aa		5.19	□□□□□ -1.58
APC1	YNL172W	VPS27	P40343	622 aa	Known RBP	5.18	□□□□□ -1.58
APC1	YNL172W	NIT1	P40447	199 aa		5.18	□□□□□ -1.58
APC1	YNL172W	ERT1	P38140	529 aa		5.18	□□□□□ -1.58
APC1	YNL172W	YPP1	P46951	817 aa		5.18	□□□□□ -1.58
APC1	YNL172W	MLC1	P53141	149 aa		5.18	□□□□□ -1.58
APC1	YNL172W	CNM67	P53865	581 aa	Known RBP	5.18	□□□□□ -1.58
APC1	YNL172W	HEM1	P09950	548 aa	Predicted RBP	5.18	□□□□□ -1.58
APC1	YNL172W	PBY1	P38254	753 aa		5.18	□□□□□ -1.58
APC1	YNL172W	EAF6	P47128	113 aa		5.18	□□□□□ -1.58
APC1	YNL172W	PRP42	Q03776	544 aa	Known RBP	5.18	□□□□□ -1.58
APC1	YNL172W	PMA1	P05030	918 aa	Known RBP	5.17	□□□□□ -1.58
APC1	YNL172W	YLL058W	Q12198	575 aa		5.17	□□□□□ -1.58
APC1	YNL172W	TFC8	Q12308	588 aa		5.17	□□□□□ -1.58
APC1	YNL172W	IDI1	P15496	288 aa		5.17	□□□□□ -1.58
APC1	YNL172W	TPD3	P31383	635 aa		5.17	□□□□□ -1.58
APC1	YNL172W	YKR075C	P36155	307 aa		5.17	□□□□□ -1.58
APC1	YNL172W	YBL028C	P38202	106 aa		5.17	□□□□□ -1.58
APC1	YNL172W	NPR2	P39923	615 aa		5.17	□□□□□ -1.58
APC1	YNL172W	YLR271W	Q06152	274 aa		5.17	□□□□□ -1.58
APC1	YNL172W	BMS1	Q08965	1183 aa	Known RBP	5.17	□□□□□ -1.58
APC1	YNL172W	RXT2	P38255	430 aa		5.17	□□□□□ -1.58
APC1	YNL172W	SOL4	P53315	255 aa		5.17	□□□□□ -1.58
APC1	YNL172W	MTC5	Q03897	1148 aa		5.17	□□□□□ -1.58
APC1	YNL172W	NGR1	P32831	672 aa	Known RBP	5.17	□□□□□ -1.58
APC1	YNL172W	SMC1	P32908	1225 aa		5.17	□□□□□ -1.58
APC1	YNL172W	PSF2	P40359	213 aa		5.17	□□□□□ -1.58
APC1	YNL172W	CST26	P38226	397 aa		5.16	□□□□□ -1.58
APC1	YNL172W	SMC3	P47037	1230 aa		5.16	□□□□□ -1.58
APC1	YNL172W	YLL066C	Q99208	1374 aa		5.16	□□□□□ -1.58
APC1	YNL172W	YDL144C	Q07589	356 aa		5.16	□□□□□ -1.58
APC1	YNL172W	YOL057W	Q08225	711 aa		5.16	□□□□□ -1.58
APC1	YNL172W	SSF2	Q12153	453 aa	Predicted RBP	5.16	□□□□□ -1.58
APC1	YNL172W	YLL067C	Q07888	1374 aa		5.16	□□□□□ -1.58
APC1	YNL172W	NUP145	P49687	1317 aa		5.16	□□□□□ -1.58
APC1	YNL172W	CDC60	P26637	1090 aa	Known RBP	5.16	□□□□□ -1.58
APC1	YNL172W	YLR225C	Q05948	407 aa	Known RBP	5.16	□□□□□ -1.58
APC1	YNL172W	YPL260W	Q08977	551 aa		5.16	□□□□□ -1.58
APC1	YNL172W	IRE1	P32361	1115 aa		5.15	□□□□□ -1.58
APC1	YNL172W	FPR4	Q06205	392 aa	Predicted RBP	5.15	□□□□□ -1.58
APC1	YNL172W	YML133C	Q03099	1374 aa		5.15	□□□□□ -1.58
APC1	YNL172W	SWI6	P09959	803 aa		5.15	□□□□□ -1.58
APC1	YNL172W	APE3	P37302	537 aa	Known RBP	5.15	□□□□□ -1.58
APC1	YNL172W	INP54	Q08227	384 aa	Known RBP	5.15	□□□□□ -1.58
APC1	YNL172W	HPR1	P17629	752 aa	Known RBP	5.15	□□□□□ -1.59
APC1	YNL172W	BOI1	P38041	980 aa	Known RBP	5.15	□□□□□ -1.59
APC1	YNL172W	TRP5	P00931	707 aa	Known RBP	5.14	□□□□□ -1.59
APC1	YNL172W	DPL1	Q05567	589 aa		5.14	□□□□□ -1.59
APC1	YNL172W	HFI1	Q12060	488 aa		5.14	□□□□□ -1.59
APC1	YNL172W	MAC1	P35192	417 aa		5.14	□□□□□ -1.59
APC1	YNL172W	CSR2	Q12734	1121 aa		5.14	□□□□□ -1.59
APC1	YNL172W	CYB2	P00175	591 aa		5.14	□□□□□ -1.59
APC1	YNL172W	SPO1	P53541	631 aa		5.14	□□□□□ -1.59
APC1	YNL172W	VPS8	P39702	1274 aa		5.13	□□□□□ -1.59
APC1	YNL172W	NET1	P47035	1189 aa		5.13	□□□□□ -1.59
APC1	YNL172W	COG8	Q04632	607 aa		5.13	□□□□□ -1.59
APC1	YNL172W	ICL2	Q12031	575 aa		5.13	□□□□□ -1.59
APC1	YNL172W	CFT2	Q12102	859 aa	Predicted RBP	5.13	□□□□□ -1.59
APC1	YNL172W	MNL2	Q12205	849 aa		5.13	□□□□□ -1.59
APC1	YNL172W	ERG7	P38604	731 aa		5.13	□□□□□ -1.59
APC1	YNL172W	HEF3	P53978	1044 aa	Known RBP	5.13	□□□□□ -1.59
APC1	YNL172W	MDR1	P53258	950 aa		5.13	□□□□□ -1.59
APC1	YNL172W	PCL8	Q08966	492 aa		5.13	□□□□□ -1.59
APC1	YNL172W	TAF10	Q12030	206 aa		5.13	□□□□□ -1.59
APC1	YNL172W	RVB2	Q12464	471 aa	Known RBP	5.13	□□□□□ -1.59
APC1	YNL172W	VMA2	P16140	517 aa	Known RBP	5.12	□□□□□ -1.59
APC1	YNL172W	SSA4	P22202	642 aa	Known RBP	5.12	□□□□□ -1.59
APC1	YNL172W	TOS1	P38288	455 aa		5.12	□□□□□ -1.59
APC1	YNL172W	YNG2	P38806	282 aa	Known RBP	5.12	□□□□□ -1.59
APC1	YNL172W	FAA3	P39002	694 aa		5.12	□□□□□ -1.59
APC1	YNL172W	YOR131C	Q12486	218 aa		5.12	□□□□□ -1.59
APC1	YNL172W	RTP1	Q12751	981 aa		5.12	□□□□□ -1.59
APC1	YNL172W	CIT3	P43635	486 aa		5.12	□□□□□ -1.59
APC1	YNL172W	NTH2	P35172	780 aa		5.12	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms