RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeast

Gene VTI1, Length 654 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTI1	YMR197C	VAN1	P23642	535 aa		4.76	□□□□□ -1.65
VTI1	YMR197C	TTI1	P36097	1038 aa		4.76	□□□□□ -1.65
VTI1	YMR197C	TGL4	P36165	910 aa		4.76	□□□□□ -1.65
VTI1	YMR197C	TAT1	P38085	619 aa		4.76	□□□□□ -1.65
VTI1	YMR197C	PRY1	P47032	299 aa		4.76	□□□□□ -1.65
VTI1	YMR197C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	RIP-Chip
VTI1	YMR197C	DMA2	P53924	522 aa		4.76	□□□□□ -1.65
VTI1	YMR197C	PGM2	P37012	569 aa	Known RBP	4.75	□□□□□ -1.65
VTI1	YMR197C	ALG14	P38242	237 aa		4.75	□□□□□ -1.65
VTI1	YMR197C	ECM23	Q02710	187 aa		4.75	□□□□□ -1.65
VTI1	YMR197C	NHA1	Q99271	985 aa		4.75	□□□□□ -1.65
VTI1	YMR197C	RPC31	P17890	251 aa		4.74	□□□□□ -1.65
VTI1	YMR197C	AMN1	P38285	549 aa	Predicted RBP	4.74	□□□□□ -1.65
VTI1	YMR197C	APM2	P38700	605 aa		4.74	□□□□□ -1.65
VTI1	YMR197C	QDR2	P40474	542 aa		4.74	□□□□□ -1.65
VTI1	YMR197C	LSB6	P42951	607 aa		4.73	□□□□□ -1.65
VTI1	YMR197C	CWH41	P53008	833 aa		4.73	□□□□□ -1.65
VTI1	YMR197C	YNR040W	P53736	256 aa		4.73	□□□□□ -1.65
VTI1	YMR197C	TRS33	Q99394	268 aa		4.73	□□□□□ -1.65
VTI1	YMR197C	NAR1	P23503	491 aa	Known RBP	4.72	□□□□□ -1.65
VTI1	YMR197C	SUV3	P32580	737 aa		4.72	□□□□□ -1.65
VTI1	YMR197C	UBX7	P38349	436 aa		4.72	□□□□□ -1.65
VTI1	YMR197C	TPS3	P38426	1054 aa	Known RBP	4.72	□□□□□ -1.65
VTI1	YMR197C	FOX2	Q02207	900 aa	Known RBP	4.72	□□□□□ -1.65
VTI1	YMR197C	GIS4	Q04233	774 aa		4.72	□□□□□ -1.65
VTI1	YMR197C	CAB1	Q04430	367 aa		4.72	□□□□□ -1.65
VTI1	YMR197C	CPS1	P27614	576 aa		4.71	□□□□□ -1.66
VTI1	YMR197C	MRPL33	P20084	86 aa		4.69	□□□□□ -1.66
VTI1	YMR197C	BUD9	P53226	547 aa		4.69	□□□□□ -1.66
VTI1	YMR197C	YPL034W	Q03083	165 aa		4.69	□□□□□ -1.66
VTI1	YMR197C	MRP10	O75012	95 aa		4.68	□□□□□ -1.66
VTI1	YMR197C	IDI1	P15496	288 aa		4.68	□□□□□ -1.66
VTI1	YMR197C	PUP1	P25043	261 aa		4.68	□□□□□ -1.66
VTI1	YMR197C	VMA3	P25515	160 aa		4.68	□□□□□ -1.66
VTI1	YMR197C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
VTI1	YMR197C	ITC1	P53125	1264 aa		4.68	□□□□□ -1.66
VTI1	YMR197C	YOR296W	Q08748	1289 aa		4.68	□□□□□ -1.66
VTI1	YMR197C	YBR197C	P38306	217 aa		4.67	□□□□□ -1.66
VTI1	YMR197C	BSD2	P38356	321 aa		4.67	□□□□□ -1.66
VTI1	YMR197C	DYS1	P38791	387 aa		4.67	□□□□□ -1.66
VTI1	YMR197C	ALD4	P46367	519 aa	Known RBP	4.67	□□□□□ -1.66
VTI1	YMR197C	RRM3	P38766	723 aa		4.66	□□□□□ -1.66
VTI1	YMR197C	YER156C	P40093	338 aa	Known RBP	4.66	□□□□□ -1.66
VTI1	YMR197C	GAS5	Q08193	484 aa		4.66	□□□□□ -1.66
VTI1	YMR197C	AI3	P03877	415 aa		4.65	□□□□□ -1.67
VTI1	YMR197C	ISC10	P32645	267 aa		4.65	□□□□□ -1.67
VTI1	YMR197C	LDH1	P38139	375 aa		4.65	□□□□□ -1.67
VTI1	YMR197C	GIP1	P38229	639 aa		4.65	□□□□□ -1.67
VTI1	YMR197C	PUF6	Q04373	656 aa	Known RBP	4.64	□□□□□ -1.67
VTI1	YMR197C	PUN1	Q06991	263 aa		4.64	□□□□□ -1.67
VTI1	YMR197C	MAC1	P35192	417 aa		4.63	□□□□□ -1.67
VTI1	YMR197C	SAC7	P17121	654 aa		4.62	□□□□□ -1.67
VTI1	YMR197C	ISW1	P38144	1129 aa		4.62	□□□□□ -1.67
VTI1	YMR197C	ALO1	P54783	526 aa	Known RBP	4.62	□□□□□ -1.67
VTI1	YMR197C	YML083C	Q04526	418 aa		4.62	□□□□□ -1.67
VTI1	YMR197C	SLP1	Q12232	587 aa		4.62	□□□□□ -1.67
VTI1	YMR197C	SFA1	P32771	386 aa		4.61	□□□□□ -1.67
VTI1	YMR197C	TED1	P40533	473 aa		4.61	□□□□□ -1.67
VTI1	YMR197C	YJL181W	P46987	611 aa		4.61	□□□□□ -1.67
VTI1	YMR197C	PPT1	P53043	513 aa		4.61	□□□□□ -1.67
VTI1	YMR197C	ARI1	P53111	347 aa	Known RBP	4.61	□□□□□ -1.67
VTI1	YMR197C	SRS2	P12954	1174 aa		4.6	□□□□□ -1.67
VTI1	YMR197C	MSN1	P22148	382 aa		4.6	□□□□□ -1.67
VTI1	YMR197C	SSA4	P22202	642 aa	Known RBP	4.6	□□□□□ -1.67
VTI1	YMR197C	PGM1	P33401	570 aa	Known RBP	4.6	□□□□□ -1.67
VTI1	YMR197C	YIL165C	P40446	119 aa		4.6	□□□□□ -1.67
VTI1	YMR197C	SOK2	P53438	785 aa	Predicted RBP	4.6	□□□□□ -1.67
VTI1	YMR197C	RSC2	Q06488	889 aa		4.6	□□□□□ -1.67
VTI1	YMR197C	GIP2	P40036	548 aa		4.59	□□□□□ -1.67
VTI1	YMR197C	TY4B-P	A0A0B7P3V8	1104 aa		4.58	□□□□□ -1.68
VTI1	YMR197C	OMA1	P36163	345 aa		4.58	□□□□□ -1.68
VTI1	YMR197C	CWC15	Q03772	175 aa	Known RBP	4.58	□□□□□ -1.68
VTI1	YMR197C	NOB1	Q08444	459 aa	Known RBP	4.58	□□□□□ -1.68
VTI1	YMR197C	TY4A-H	Q6Q5P6	413 aa		4.58	□□□□□ -1.68
VTI1	YMR197C	COQ2	P32378	372 aa		4.57	□□□□□ -1.68
VTI1	YMR197C	FIR1	P40020	876 aa		4.57	□□□□□ -1.68
VTI1	YMR197C	INP52	P50942	1183 aa		4.57	□□□□□ -1.68
VTI1	YMR197C	RSC6	P25632	483 aa		4.56	□□□□□ -1.68
VTI1	YMR197C	INP51	P40559	946 aa	Known RBP	4.56	□□□□□ -1.68
VTI1	YMR197C	HXT8	P40886	569 aa		4.56	□□□□□ -1.68
VTI1	YMR197C	PNP1	Q05788	311 aa		4.56	□□□□□ -1.68
VTI1	YMR197C	EMG1	Q06287	252 aa	Known RBP	4.56	□□□□□ -1.68
VTI1	YMR197C	TY1A-NL1	Q12391	440 aa	Known RBP	4.56	□□□□□ -1.68
VTI1	YMR197C	YBR287W	P38355	427 aa		4.55	□□□□□ -1.68
VTI1	YMR197C	SUT1	P53032	299 aa	Known RBP	4.55	□□□□□ -1.68
VTI1	YMR197C	KTR2	P33550	425 aa		4.54	□□□□□ -1.68
VTI1	YMR197C	KAE1	P36132	386 aa		4.54	□□□□□ -1.68
VTI1	YMR197C	PAN5	P38787	379 aa		4.54	□□□□□ -1.68
VTI1	YMR197C	AIM46	P38885	310 aa		4.54	□□□□□ -1.68
VTI1	YMR197C	DSE4	P53753	1117 aa		4.54	□□□□□ -1.68
VTI1	YMR197C	YLR122C	Q12312	125 aa		4.54	□□□□□ -1.68
VTI1	YMR197C	RRN6	P32786	894 aa		4.53	□□□□□ -1.68
VTI1	YMR197C	TFA2	P36145	328 aa		4.53	□□□□□ -1.68
VTI1	YMR197C	YKR073C	P36153	106 aa		4.53	□□□□□ -1.68
VTI1	YMR197C	BOI1	P38041	980 aa	Known RBP	4.53	□□□□□ -1.68
VTI1	YMR197C	AKR1	P39010	764 aa		4.53	□□□□□ -1.68
VTI1	YMR197C	RGD2	P43556	714 aa		4.53	□□□□□ -1.68
VTI1	YMR197C	ALD3	P54114	506 aa		4.53	□□□□□ -1.68
VTI1	YMR197C	APC11	Q12157	165 aa		4.53	□□□□□ -1.68
VTI1	YMR197C	TRP3	P00937	484 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms