RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C PTK2P47116 818 aaKnown RBP6.28□□□□□ -1.4
EAR1YMR171C MSC6Q08818 692 aaKnown RBP6.28□□□□□ -1.4
EAR1YMR171C TY2B-BQ12491 1770 aa6.28□□□□□ -1.4
EAR1YMR171C HEM3P28789 327 aa6.27□□□□□ -1.41
EAR1YMR171C SSN3P39073 555 aa6.27□□□□□ -1.41
EAR1YMR171C ACF4P47129 309 aa6.27□□□□□ -1.41
EAR1YMR171C YJR115WP47152 169 aa6.27□□□□□ -1.41
EAR1YMR171C SEC20P28791 383 aa6.26□□□□□ -1.41
EAR1YMR171C ALA1P40825 983 aaKnown RBP6.26□□□□□ -1.41
EAR1YMR171C SRF1Q12516 437 aa6.26□□□□□ -1.41
EAR1YMR171C PDR15Q04182 1529 aaKnown RBP6.26□□□□□ -1.41
EAR1YMR171C DLD1P32891 587 aa6.26□□□□□ -1.41
EAR1YMR171C SCD5P34758 872 aa6.26□□□□□ -1.41
EAR1YMR171C YNL165WP53891 406 aa6.26□□□□□ -1.41
EAR1YMR171C FRT1Q99332 602 aa6.26□□□□□ -1.41
EAR1YMR171C NUT2Q06213 157 aa6.25□□□□□ -1.41
EAR1YMR171C APC11Q12157 165 aa6.25□□□□□ -1.41
EAR1YMR171C MRPL33P20084 86 aa6.24□□□□□ -1.41
EAR1YMR171C MSN5P52918 1224 aa6.24□□□□□ -1.41
EAR1YMR171C Q0182Q9ZZW1 134 aa6.24□□□□□ -1.41
EAR1YMR171C RPB10P22139 70 aa6.23□□□□□ -1.41
EAR1YMR171C PPX1P38698 397 aa6.23□□□□□ -1.41
EAR1YMR171C JJJ2P46997 583 aa6.23□□□□□ -1.41
EAR1YMR171C MLF3P32047 452 aa6.23□□□□□ -1.41
EAR1YMR171C SHM1P37292 490 aaPredicted RBP6.23□□□□□ -1.41
EAR1YMR171C WHI5Q12416 295 aa6.23□□□□□ -1.41
EAR1YMR171C ULS1Q08562 1619 aa6.22□□□□□ -1.41
EAR1YMR171C TY1B-HO13535 1793 aa6.22□□□□□ -1.41
EAR1YMR171C TY1B-DR5P0C2I2 1755 aa6.22□□□□□ -1.41
EAR1YMR171C TY1B-DR6P0C2I3 1755 aa6.22□□□□□ -1.41
EAR1YMR171C TY1B-LR2P0C2I5 1755 aa6.22□□□□□ -1.41
EAR1YMR171C TY1B-LR3P0C2I6 1755 aaKnown RBP6.22□□□□□ -1.41
EAR1YMR171C TY1B-PR1P0C2I9 1755 aaKnown RBP6.22□□□□□ -1.41
EAR1YMR171C TY1B-PR2P0C2J0 1756 aa6.22□□□□□ -1.41
EAR1YMR171C TY1B-PR3P0C2J1 1755 aaKnown RBP6.22□□□□□ -1.41
EAR1YMR171C TY1B-JR1P47098 1755 aa6.22□□□□□ -1.41
EAR1YMR171C TY1B-ML2Q03434 1755 aaKnown RBP6.22□□□□□ -1.41
EAR1YMR171C TY1B-ER1Q03612 1755 aa6.22□□□□□ -1.41
EAR1YMR171C TY1B-ML1Q04711 1755 aaKnown RBP6.22□□□□□ -1.41
EAR1YMR171C TY1B-GR2Q12269 1755 aa6.22□□□□□ -1.41
EAR1YMR171C TY1B-OLQ12273 1755 aa6.22□□□□□ -1.41
EAR1YMR171C TY1B-PLQ12414 1755 aaKnown RBP6.22□□□□□ -1.41
EAR1YMR171C TRK1P12685 1235 aa6.22□□□□□ -1.41
EAR1YMR171C KTR2P33550 425 aa6.22□□□□□ -1.41
EAR1YMR171C SPR3P41901 512 aa6.22□□□□□ -1.41
EAR1YMR171C NUP85P46673 744 aa6.22□□□□□ -1.41
EAR1YMR171C YJR098CP47139 656 aa6.22□□□□□ -1.41
EAR1YMR171C PAN1P32521 1480 aa6.22□□□□□ -1.41
EAR1YMR171C RPS31P05759 152 aaKnown RBP6.21□□□□□ -1.42
EAR1YMR171C GEA1P47102 1408 aaPredicted RBP6.21□□□□□ -1.42
EAR1YMR171C UTP4Q06679 776 aaKnown RBP6.21□□□□□ -1.42
EAR1YMR171C VMA3P25515 160 aa6.2□□□□□ -1.42
EAR1YMR171C DAL1P32375 460 aa6.2□□□□□ -1.42
EAR1YMR171C SLA1P32790 1244 aa6.2□□□□□ -1.42
EAR1YMR171C AHP1P38013 176 aaKnown RBP6.2□□□□□ -1.42
EAR1YMR171C SUT1P53032 299 aaKnown RBP6.2□□□□□ -1.42
EAR1YMR171C LSC2P53312 427 aa6.2□□□□□ -1.42
EAR1YMR171C TRS120Q04183 1289 aa6.2□□□□□ -1.42
EAR1YMR171C TY1A-DR3Q12441 440 aa6.2□□□□□ -1.42
EAR1YMR171C THI12P42883 340 aa6.2□□□□□ -1.42
EAR1YMR171C THI5P43534 340 aa6.2□□□□□ -1.42
EAR1YMR171C VTC4P47075 721 aa6.2□□□□□ -1.42
EAR1YMR171C THI11P47183 340 aa6.2□□□□□ -1.42
EAR1YMR171C SRC1Q03707 834 aa6.2□□□□□ -1.42
EAR1YMR171C THI13Q07748 340 aa6.2□□□□□ -1.42
EAR1YMR171C TY1B-BRQ12193 1756 aa6.19□□□□□ -1.42
EAR1YMR171C TY1B-GR3Q12316 1755 aa6.19□□□□□ -1.42
EAR1YMR171C TY1B-ORQ92393 1755 aa6.19□□□□□ -1.42
EAR1YMR171C SSM4P40318 1319 aa6.19□□□□□ -1.42
EAR1YMR171C IRE1P32361 1115 aa6.19□□□□□ -1.42
EAR1YMR171C QDR2P40474 542 aa6.18□□□□□ -1.42
EAR1YMR171C UFD2P54860 961 aa6.17□□□□□ -1.42
EAR1YMR171C VTH1P40438 1549 aa6.17□□□□□ -1.42
EAR1YMR171C VTH2P40890 1549 aa6.17□□□□□ -1.42
EAR1YMR171C MET4P32389 672 aa6.17□□□□□ -1.42
EAR1YMR171C YTA6P40328 754 aa6.17□□□□□ -1.42
EAR1YMR171C HXT8P40886 569 aa6.17□□□□□ -1.42
EAR1YMR171C RRP15Q06511 250 aaPredicted RBP6.17□□□□□ -1.42
EAR1YMR171C GPI13Q07830 1017 aa6.17□□□□□ -1.42
EAR1YMR171C PSH1Q12161 406 aa6.17□□□□□ -1.42
EAR1YMR171C MNL2Q12205 849 aa6.17□□□□□ -1.42
EAR1YMR171C TCB1Q12466 1186 aa6.17□□□□□ -1.42
EAR1YMR171C ATE1P16639 503 aa6.16□□□□□ -1.42
EAR1YMR171C PDC6P26263 563 aaKnown RBP6.16□□□□□ -1.42
EAR1YMR171C ASF1P32447 279 aa6.16□□□□□ -1.42
EAR1YMR171C LDH1P38139 375 aa6.16□□□□□ -1.42
EAR1YMR171C BRE2P43132 505 aa6.16□□□□□ -1.42
EAR1YMR171C POL32P47110 350 aa6.16□□□□□ -1.42
EAR1YMR171C TSC11P40061 1430 aa6.16□□□□□ -1.42
EAR1YMR171C ESC1Q03661 1658 aaKnown RBP6.15□□□□□ -1.42
EAR1YMR171C DYS1P38791 387 aa6.15□□□□□ -1.42
EAR1YMR171C RGA1P39083 1007 aa6.15□□□□□ -1.42
EAR1YMR171C NOP2P40991 618 aaKnown RBP6.15□□□□□ -1.42
EAR1YMR171C KAP122P32767 1081 aa6.14□□□□□ -1.43
EAR1YMR171C MTO1P53070 669 aa6.14□□□□□ -1.43
EAR1YMR171C SNU71P53207 620 aaKnown RBP6.14□□□□□ -1.43
EAR1YMR171C LTE1P07866 1435 aa6.14□□□□□ -1.43
EAR1YMR171C YBT1P32386 1661 aa6.14□□□□□ -1.43
EAR1YMR171C ALD2P47771 506 aa6.14□□□□□ -1.43
EAR1YMR171C MET5P47169 1442 aa6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms