RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C MET1P36150 593 aa5.58□□□□□ -1.52
UBX4YMR067C DYS1P38791 387 aa5.58□□□□□ -1.52
UBX4YMR067C QDR2P40474 542 aa5.58□□□□□ -1.52
UBX4YMR067C FOX2Q02207 900 aaKnown RBP5.58□□□□□ -1.52
UBX4YMR067C CWC15Q03772 175 aaKnown RBP5.58□□□□□ -1.52
UBX4YMR067C THI72Q08579 599 aa5.58□□□□□ -1.52
UBX4YMR067C YBR197CP38306 217 aa5.57□□□□□ -1.52
UBX4YMR067C APM2P38700 605 aa5.57□□□□□ -1.52
UBX4YMR067C YML083CQ04526 418 aa5.57□□□□□ -1.52
UBX4YMR067C PUN1Q06991 263 aa5.57□□□□□ -1.52
UBX4YMR067C SUB2Q07478 446 aaKnown RBP5.57□□□□□ -1.52
UBX4YMR067C MDJ1P35191 511 aa5.56□□□□□ -1.52
UBX4YMR067C YPR053CQ6Q5F3 151 aa5.56□□□□□ -1.52
UBX4YMR067C VMA3P25515 160 aa5.55□□□□□ -1.52
UBX4YMR067C YNR014WP53719 212 aa5.55□□□□□ -1.52
UBX4YMR067C ISC10P32645 267 aa5.54□□□□□ -1.52
UBX4YMR067C LDH1P38139 375 aa5.54□□□□□ -1.52
UBX4YMR067C MCX1P38323 520 aaPredicted RBP5.54□□□□□ -1.52
UBX4YMR067C SBE2P42223 864 aaKnown RBP5.54□□□□□ -1.52
UBX4YMR067C TDA6Q06466 467 aa5.54□□□□□ -1.52
UBX4YMR067C YOR296WQ08748 1289 aa5.54□□□□□ -1.52
UBX4YMR067C BOI2P39969 1040 aa5.53□□□□□ -1.52
UBX4YMR067C YER156CP40093 338 aaKnown RBP5.53□□□□□ -1.52
UBX4YMR067C PRK1P40494 810 aa5.53□□□□□ -1.52
UBX4YMR067C PNP1Q05788 311 aa5.53□□□□□ -1.52
UBX4YMR067C GIP1P38229 639 aa5.52□□□□□ -1.53
UBX4YMR067C RRN6P32786 894 aa5.51□□□□□ -1.53
UBX4YMR067C ISW1P38144 1129 aa5.51□□□□□ -1.53
UBX4YMR067C YBR287WP38355 427 aa5.51□□□□□ -1.53
UBX4YMR067C ITC1P53125 1264 aa5.51□□□□□ -1.53
UBX4YMR067C IDI1P15496 288 aa5.5□□□□□ -1.53
UBX4YMR067C SKN7P38889 622 aa5.5□□□□□ -1.53
UBX4YMR067C YNR040WP53736 256 aa5.5□□□□□ -1.53
UBX4YMR067C YMR187CQ03236 431 aa5.5□□□□□ -1.53
UBX4YMR067C APC11Q12157 165 aa5.5□□□□□ -1.53
UBX4YMR067C LSB3P43603 459 aaKnown RBP5.49□□□□□ -1.53
UBX4YMR067C RPL34AP87262 121 aaPredicted RBP5.49□□□□□ -1.53
UBX4YMR067C RSC2Q06488 889 aa5.49□□□□□ -1.53
UBX4YMR067C NHA1Q99271 985 aa5.49□□□□□ -1.53
UBX4YMR067C BSD2P38356 321 aa5.48□□□□□ -1.53
UBX4YMR067C TPS3P38426 1054 aaKnown RBP5.48□□□□□ -1.53
UBX4YMR067C LSO1Q3E827 93 aa5.48□□□□□ -1.53
UBX4YMR067C FUR4P05316 633 aaKnown RBP5.47□□□□□ -1.53
UBX4YMR067C SSA1P10591 642 aaKnown RBP5.47□□□□□ -1.53
UBX4YMR067C MSN1P22148 382 aa5.47□□□□□ -1.53
UBX4YMR067C ALG14P38242 237 aa5.47□□□□□ -1.53
UBX4YMR067C FIR1P40020 876 aa5.47□□□□□ -1.53
UBX4YMR067C HXT8P40886 569 aa5.47□□□□□ -1.53
UBX4YMR067C CCT8P47079 568 aaKnown RBP5.47□□□□□ -1.53
UBX4YMR067C GIS4Q04233 774 aa5.47□□□□□ -1.53
UBX4YMR067C SLP1Q12232 587 aa5.47□□□□□ -1.53
UBX4YMR067C NAR1P23503 491 aaKnown RBP5.46□□□□□ -1.54
UBX4YMR067C PGM2P37012 569 aaKnown RBP5.46□□□□□ -1.54
UBX4YMR067C YDR215CQ12240 137 aa5.46□□□□□ -1.54
UBX4YMR067C NAB2P32505 525 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54 RIP-Chip
UBX4YMR067C YIL165CP40446 119 aa5.45□□□□□ -1.54
UBX4YMR067C KTR2P33550 425 aa5.44□□□□□ -1.54
UBX4YMR067C BOL3P39724 118 aa5.44□□□□□ -1.54
UBX4YMR067C NTA1P40354 457 aa5.44□□□□□ -1.54
UBX4YMR067C YCK2P23292 546 aaKnown RBP5.43□□□□□ -1.54
UBX4YMR067C SMC1P32908 1225 aa5.43□□□□□ -1.54
UBX4YMR067C BOI1P38041 980 aaKnown RBP5.43□□□□□ -1.54
UBX4YMR067C PPT1P53043 513 aa5.43□□□□□ -1.54
UBX4YMR067C RPB10P22139 70 aa5.42□□□□□ -1.54
UBX4YMR067C AIM46P38885 310 aa5.41□□□□□ -1.54
UBX4YMR067C SUT1P53032 299 aaKnown RBP5.41□□□□□ -1.54
UBX4YMR067C EMG1Q06287 252 aaKnown RBP5.41□□□□□ -1.54
UBX4YMR067C MRP10O75012 95 aa5.4□□□□□ -1.54
UBX4YMR067C TAT1P38085 619 aa5.4□□□□□ -1.54
UBX4YMR067C RAD55P38953 406 aa5.4□□□□□ -1.54
UBX4YMR067C RGD2P43556 714 aa5.4□□□□□ -1.54
UBX4YMR067C ATG1P53104 897 aa5.4□□□□□ -1.54
UBX4YMR067C KAR5Q04746 504 aa5.4□□□□□ -1.54
UBX4YMR067C FUS1P11710 512 aa5.39□□□□□ -1.55
UBX4YMR067C IRS4P36115 615 aaKnown RBP5.39□□□□□ -1.55
UBX4YMR067C SLN1P39928 1220 aaPredicted RBP5.39□□□□□ -1.55
UBX4YMR067C LEM3P42838 414 aa5.39□□□□□ -1.55
UBX4YMR067C BUD9P53226 547 aa5.39□□□□□ -1.55
UBX4YMR067C UFD2P54860 961 aa5.39□□□□□ -1.55
UBX4YMR067C AI3P03877 415 aa5.38□□□□□ -1.55
UBX4YMR067C CDC3P32457 520 aaKnown RBP5.38□□□□□ -1.55
UBX4YMR067C GEF1P37020 779 aa5.38□□□□□ -1.55
UBX4YMR067C INP51P40559 946 aaKnown RBP5.38□□□□□ -1.55
UBX4YMR067C SFA1P32771 386 aa5.37□□□□□ -1.55
UBX4YMR067C AMN1P38285 549 aaPredicted RBP5.37□□□□□ -1.55
UBX4YMR067C GLO3P38682 493 aaKnown RBP5.37□□□□□ -1.55
UBX4YMR067C PSY2P40164 858 aa5.37□□□□□ -1.55
UBX4YMR067C PRY1P47032 299 aa5.37□□□□□ -1.55
UBX4YMR067C GUP1P53154 560 aa5.37□□□□□ -1.55
UBX4YMR067C SOG2Q08817 791 aa5.37□□□□□ -1.55
UBX4YMR067C TIF6Q12522 245 aaKnown RBP5.37□□□□□ -1.55
UBX4YMR067C RRM3P38766 723 aa5.36□□□□□ -1.55
UBX4YMR067C GIP2P40036 548 aa5.36□□□□□ -1.55
UBX4YMR067C YJL181WP46987 611 aa5.36□□□□□ -1.55
UBX4YMR067C ACF4P47129 309 aa5.36□□□□□ -1.55
UBX4YMR067C BIO5P53744 561 aaKnown RBP5.36□□□□□ -1.55
UBX4YMR067C ALD3P54114 506 aa5.36□□□□□ -1.55
UBX4YMR067C SAC7P17121 654 aa5.35□□□□□ -1.55
UBX4YMR067C QDR1P40475 563 aa5.35□□□□□ -1.55
UBX4YMR067C SOK2P53438 785 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms