RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C KNS1P32350 737 aaPredicted RBP6.66□□□□□ -1.34
SUB1YMR039C ISC10P32645 267 aa6.66□□□□□ -1.34
SUB1YMR039C NCL1P38205 684 aaKnown RBP6.66□□□□□ -1.34
SUB1YMR039C ICP55P40051 511 aa6.66□□□□□ -1.34
SUB1YMR039C PNP1Q05788 311 aa6.66□□□□□ -1.34
SUB1YMR039C PHM7Q12252 991 aa6.66□□□□□ -1.34
SUB1YMR039C PDC5P16467 563 aaKnown RBP6.65□□□□□ -1.34
SUB1YMR039C APM2P38700 605 aa6.65□□□□□ -1.34
SUB1YMR039C DYS1P38791 387 aa6.65□□□□□ -1.34
SUB1YMR039C YFL066CP43538 392 aa6.65□□□□□ -1.34
SUB1YMR039C NSG2P53898 299 aa6.64□□□□□ -1.35
SUB1YMR039C THI72Q08579 599 aa6.64□□□□□ -1.35
SUB1YMR039C LDH1P38139 375 aa6.63□□□□□ -1.35
SUB1YMR039C TPS3P38426 1054 aaKnown RBP6.63□□□□□ -1.35
SUB1YMR039C MDJ1P35191 511 aa6.62□□□□□ -1.35
SUB1YMR039C YOR296WQ08748 1289 aa6.62□□□□□ -1.35
SUB1YMR039C SSA1P10591 642 aaKnown RBP6.61□□□□□ -1.35
SUB1YMR039C RRN6P32786 894 aa6.61□□□□□ -1.35
SUB1YMR039C PRK1P40494 810 aa6.61□□□□□ -1.35
SUB1YMR039C YNR040WP53736 256 aa6.61□□□□□ -1.35
SUB1YMR039C PUS1Q12211 544 aaKnown RBP6.61□□□□□ -1.35
SUB1YMR039C GIP1P38229 639 aa6.6□□□□□ -1.35
SUB1YMR039C SBE2P42223 864 aaKnown RBP6.6□□□□□ -1.35
SUB1YMR039C RPL34AP87262 121 aaPredicted RBP6.6□□□□□ -1.35
SUB1YMR039C NAB2P32505 525 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35not detected
SUB1YMR039C MET1P36150 593 aa6.59□□□□□ -1.35
SUB1YMR039C YER156CP40093 338 aaKnown RBP6.59□□□□□ -1.35
SUB1YMR039C ITC1P53125 1264 aa6.59□□□□□ -1.35
SUB1YMR039C APC11Q12157 165 aa6.59□□□□□ -1.35
SUB1YMR039C LSO1Q3E827 93 aa6.59□□□□□ -1.35
SUB1YMR039C ISW1P38144 1129 aa6.58□□□□□ -1.36
SUB1YMR039C BSD2P38356 321 aa6.58□□□□□ -1.36
SUB1YMR039C YNR014WP53719 212 aa6.58□□□□□ -1.36
SUB1YMR039C BOI1P38041 980 aaKnown RBP6.57□□□□□ -1.36
SUB1YMR039C BOL3P39724 118 aa6.57□□□□□ -1.36
SUB1YMR039C TDA6Q06466 467 aa6.57□□□□□ -1.36
SUB1YMR039C FUR4P05316 633 aaKnown RBP6.56□□□□□ -1.36
SUB1YMR039C IDI1P15496 288 aa6.56□□□□□ -1.36
SUB1YMR039C MSN1P22148 382 aa6.56□□□□□ -1.36
SUB1YMR039C MCX1P38323 520 aaPredicted RBP6.56□□□□□ -1.36
SUB1YMR039C BOI2P39969 1040 aa6.56□□□□□ -1.36
SUB1YMR039C HXT8P40886 569 aa6.56□□□□□ -1.36
SUB1YMR039C KTR2P33550 425 aa6.55□□□□□ -1.36
SUB1YMR039C YBR287WP38355 427 aa6.55□□□□□ -1.36
SUB1YMR039C YPR053CQ6Q5F3 151 aa6.55□□□□□ -1.36
SUB1YMR039C FIR1P40020 876 aa6.53□□□□□ -1.36
SUB1YMR039C YIL165CP40446 119 aa6.53□□□□□ -1.36
SUB1YMR039C RPB10P22139 70 aa6.52□□□□□ -1.37
SUB1YMR039C YMR187CQ03236 431 aa6.52□□□□□ -1.37
SUB1YMR039C GIS4Q04233 774 aa6.52□□□□□ -1.37
SUB1YMR039C KAR5Q04746 504 aa6.52□□□□□ -1.37
SUB1YMR039C TAF7Q05021 590 aa6.52□□□□□ -1.37
SUB1YMR039C RSC2Q06488 889 aa6.52□□□□□ -1.37
SUB1YMR039C NHA1Q99271 985 aa6.52□□□□□ -1.37
SUB1YMR039C NAR1P23503 491 aaKnown RBP6.51□□□□□ -1.37
SUB1YMR039C PGM2P37012 569 aaKnown RBP6.51□□□□□ -1.37
SUB1YMR039C GEF1P37020 779 aa6.51□□□□□ -1.37
SUB1YMR039C ALG14P38242 237 aa6.51□□□□□ -1.37
SUB1YMR039C SKN7P38889 622 aa6.51□□□□□ -1.37
SUB1YMR039C SUT1P53032 299 aaKnown RBP6.51□□□□□ -1.37
SUB1YMR039C MRP10O75012 95 aa6.5□□□□□ -1.37
SUB1YMR039C SMC1P32908 1225 aa6.5□□□□□ -1.37
SUB1YMR039C NTA1P40354 457 aa6.5□□□□□ -1.37
SUB1YMR039C RGD2P43556 714 aa6.5□□□□□ -1.37
SUB1YMR039C EMG1Q06287 252 aaKnown RBP6.5□□□□□ -1.37
SUB1YMR039C CDC3P32457 520 aaKnown RBP6.49□□□□□ -1.37
SUB1YMR039C PPT1P53043 513 aa6.49□□□□□ -1.37
SUB1YMR039C ATG1P53104 897 aa6.49□□□□□ -1.37
SUB1YMR039C AIM46P38885 310 aa6.48□□□□□ -1.37
SUB1YMR039C LSB3P43603 459 aaKnown RBP6.48□□□□□ -1.37
SUB1YMR039C SLP1Q12232 587 aa6.48□□□□□ -1.37
SUB1YMR039C YDR215CQ12240 137 aa6.48□□□□□ -1.37
SUB1YMR039C YCK2P23292 546 aaKnown RBP6.47□□□□□ -1.37
SUB1YMR039C RAD55P38953 406 aa6.47□□□□□ -1.37
SUB1YMR039C CCT8P47079 568 aaKnown RBP6.47□□□□□ -1.37
SUB1YMR039C IRS4P36115 615 aaKnown RBP6.46□□□□□ -1.38
SUB1YMR039C GLO3P38682 493 aaKnown RBP6.46□□□□□ -1.38
SUB1YMR039C QDR1P40475 563 aa6.46□□□□□ -1.38
SUB1YMR039C TIF6Q12522 245 aaKnown RBP6.45□□□□□ -1.38
SUB1YMR039C PSY2P40164 858 aa6.44□□□□□ -1.38
SUB1YMR039C ACF4P47129 309 aa6.44□□□□□ -1.38
SUB1YMR039C UFD2P54860 961 aa6.44□□□□□ -1.38
SUB1YMR039C TRL1P09880 827 aaKnown RBP6.43□□□□□ -1.38
SUB1YMR039C SLN1P39928 1220 aaPredicted RBP6.43□□□□□ -1.38
SUB1YMR039C INP51P40559 946 aaKnown RBP6.43□□□□□ -1.38
SUB1YMR039C YJL181WP46987 611 aa6.43□□□□□ -1.38
SUB1YMR039C FUS1P11710 512 aa6.42□□□□□ -1.38
SUB1YMR039C BUD9P53226 547 aa6.42□□□□□ -1.38
SUB1YMR039C GIP2P40036 548 aa6.41□□□□□ -1.38
SUB1YMR039C BIO5P53744 561 aaKnown RBP6.41□□□□□ -1.38
SUB1YMR039C ALD3P54114 506 aa6.41□□□□□ -1.38
SUB1YMR039C SOG2Q08817 791 aa6.41□□□□□ -1.38
SUB1YMR039C TAT1P38085 619 aa6.4□□□□□ -1.38
SUB1YMR039C LEM3P42838 414 aa6.4□□□□□ -1.38
SUB1YMR039C PRY1P47032 299 aa6.4□□□□□ -1.38
SUB1YMR039C GUP1P53154 560 aa6.4□□□□□ -1.38
SUB1YMR039C SOK2P53438 785 aaPredicted RBP6.4□□□□□ -1.38
SUB1YMR039C TFA2P36145 328 aa6.39□□□□□ -1.39
SUB1YMR039C RRM3P38766 723 aa6.39□□□□□ -1.39
SUB1YMR039C ERP5P38819 212 aa6.39□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 87.4 ms