RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W VAN1P23642 535 aa8.06□□□□□ -1.12
CSI1YMR025W NCL1P38205 684 aaKnown RBP8.06□□□□□ -1.12
CSI1YMR025W ECM23Q02710 187 aa8.05□□□□□ -1.12
CSI1YMR025W MCA1Q08601 432 aa8.05□□□□□ -1.12
CSI1YMR025W PRY1P47032 299 aa8.03□□□□□ -1.12
CSI1YMR025W YNR040WP53736 256 aa8.03□□□□□ -1.12
CSI1YMR025W RPC31P17890 251 aa8.02□□□□□ -1.13
CSI1YMR025W PGM2P37012 569 aaKnown RBP8.02□□□□□ -1.13
CSI1YMR025W TAT1P38085 619 aa8.02□□□□□ -1.13
CSI1YMR025W ALG14P38242 237 aa8.02□□□□□ -1.13
CSI1YMR025W AMN1P38285 549 aaPredicted RBP8.02□□□□□ -1.13
CSI1YMR025W QDR2P40474 542 aa8.02□□□□□ -1.13
CSI1YMR025W NRD1P53617 575 aaKnown RBP RIP-Chip data8.02□□□□□ -1.13not detected
CSI1YMR025W NHA1Q99271 985 aa8.02□□□□□ -1.13
CSI1YMR025W SUV3P32580 737 aa8.01□□□□□ -1.13
CSI1YMR025W APM2P38700 605 aa8.01□□□□□ -1.13
CSI1YMR025W TRS33Q99394 268 aa8.01□□□□□ -1.13
CSI1YMR025W CWH41P53008 833 aa8□□□□□ -1.13
CSI1YMR025W UBX7P38349 436 aa7.99□□□□□ -1.13
CSI1YMR025W TPS3P38426 1054 aaKnown RBP7.99□□□□□ -1.13
CSI1YMR025W LSB6P42951 607 aa7.99□□□□□ -1.13
CSI1YMR025W CAB1Q04430 367 aa7.99□□□□□ -1.13
CSI1YMR025W NAR1P23503 491 aaKnown RBP7.98□□□□□ -1.13
CSI1YMR025W CPS1P27614 576 aa7.98□□□□□ -1.13
CSI1YMR025W FOX2Q02207 900 aaKnown RBP7.96□□□□□ -1.14
CSI1YMR025W GIS4Q04233 774 aa7.96□□□□□ -1.14
CSI1YMR025W MRPL33P20084 86 aa7.94□□□□□ -1.14
CSI1YMR025W VMA3P25515 160 aa7.94□□□□□ -1.14
CSI1YMR025W NAB2P32505 525 aaKnown RBP RIP-Chip data7.94□□□□□ -1.14 RIP-Chip
CSI1YMR025W BUD9P53226 547 aa7.94□□□□□ -1.14
CSI1YMR025W MRP10O75012 95 aa7.93□□□□□ -1.14
CSI1YMR025W PUP1P25043 261 aa7.93□□□□□ -1.14
CSI1YMR025W ITC1P53125 1264 aa7.93□□□□□ -1.14
CSI1YMR025W YPL034WQ03083 165 aa7.93□□□□□ -1.14
CSI1YMR025W IDI1P15496 288 aa7.92□□□□□ -1.14
CSI1YMR025W YBR197CP38306 217 aa7.92□□□□□ -1.14
CSI1YMR025W YOR296WQ08748 1289 aa7.91□□□□□ -1.14
CSI1YMR025W BSD2P38356 321 aa7.89□□□□□ -1.15
CSI1YMR025W DYS1P38791 387 aa7.89□□□□□ -1.15
CSI1YMR025W ALD4P46367 519 aaKnown RBP7.89□□□□□ -1.15
CSI1YMR025W GAS5Q08193 484 aa7.89□□□□□ -1.15
CSI1YMR025W YER156CP40093 338 aaKnown RBP7.88□□□□□ -1.15
CSI1YMR025W ISC10P32645 267 aa7.87□□□□□ -1.15
CSI1YMR025W LDH1P38139 375 aa7.87□□□□□ -1.15
CSI1YMR025W RRM3P38766 723 aa7.87□□□□□ -1.15
CSI1YMR025W GIP1P38229 639 aa7.86□□□□□ -1.15
CSI1YMR025W AI3P03877 415 aa7.85□□□□□ -1.15
CSI1YMR025W PUF6Q04373 656 aaKnown RBP7.85□□□□□ -1.15
CSI1YMR025W PUN1Q06991 263 aa7.85□□□□□ -1.15
CSI1YMR025W SAC7P17121 654 aa7.82□□□□□ -1.16
CSI1YMR025W YML083CQ04526 418 aa7.82□□□□□ -1.16
CSI1YMR025W SLP1Q12232 587 aa7.82□□□□□ -1.16
CSI1YMR025W GLT1Q12680 2145 aaKnown RBP7.81□□□□□ -1.16
CSI1YMR025W ISW1P38144 1129 aa7.81□□□□□ -1.16
CSI1YMR025W SRS2P12954 1174 aa7.8□□□□□ -1.16
CSI1YMR025W ALO1P54783 526 aaKnown RBP7.8□□□□□ -1.16
CSI1YMR025W MSN1P22148 382 aa7.79□□□□□ -1.16
CSI1YMR025W SFA1P32771 386 aa7.79□□□□□ -1.16
CSI1YMR025W YIL165CP40446 119 aa7.79□□□□□ -1.16
CSI1YMR025W TED1P40533 473 aa7.79□□□□□ -1.16
CSI1YMR025W ARI1P53111 347 aaKnown RBP7.79□□□□□ -1.16
CSI1YMR025W RSC2Q06488 889 aa7.79□□□□□ -1.16
CSI1YMR025W SSA4P22202 642 aaKnown RBP7.78□□□□□ -1.16
CSI1YMR025W PGM1P33401 570 aaKnown RBP7.78□□□□□ -1.16
CSI1YMR025W MAC1P35192 417 aa7.78□□□□□ -1.16
CSI1YMR025W YJL181WP46987 611 aa7.78□□□□□ -1.16
CSI1YMR025W PPT1P53043 513 aa7.78□□□□□ -1.16
CSI1YMR025W CWC15Q03772 175 aaKnown RBP7.78□□□□□ -1.16
CSI1YMR025W NOB1Q08444 459 aaKnown RBP7.78□□□□□ -1.16
CSI1YMR025W GIP2P40036 548 aa7.77□□□□□ -1.17
CSI1YMR025W SOK2P53438 785 aaPredicted RBP7.77□□□□□ -1.17
CSI1YMR025W TY4B-PA0A0B7P3V8 1104 aa7.76□□□□□ -1.17
CSI1YMR025W TY4A-HQ6Q5P6 413 aa7.76□□□□□ -1.17
CSI1YMR025W OMA1P36163 345 aa7.74□□□□□ -1.17
CSI1YMR025W EMG1Q06287 252 aaKnown RBP7.74□□□□□ -1.17
CSI1YMR025W HXT8P40886 569 aa7.73□□□□□ -1.17
CSI1YMR025W RSC6P25632 483 aa7.72□□□□□ -1.17
CSI1YMR025W FIR1P40020 876 aa7.72□□□□□ -1.17
CSI1YMR025W INP52P50942 1183 aa7.72□□□□□ -1.17
CSI1YMR025W PNP1Q05788 311 aa7.72□□□□□ -1.17
CSI1YMR025W COQ2P32378 372 aa7.71□□□□□ -1.18
CSI1YMR025W INP51P40559 946 aaKnown RBP7.71□□□□□ -1.18
CSI1YMR025W TY1A-NL1Q12391 440 aaKnown RBP7.71□□□□□ -1.18
CSI1YMR025W KTR2P33550 425 aa7.7□□□□□ -1.18
CSI1YMR025W BOI1P38041 980 aaKnown RBP7.7□□□□□ -1.18
CSI1YMR025W YBR287WP38355 427 aa7.7□□□□□ -1.18
CSI1YMR025W AIM46P38885 310 aa7.69□□□□□ -1.18
CSI1YMR025W RGD2P43556 714 aa7.69□□□□□ -1.18
CSI1YMR025W SUT1P53032 299 aaKnown RBP7.69□□□□□ -1.18
CSI1YMR025W DSE4P53753 1117 aa7.69□□□□□ -1.18
CSI1YMR025W RRN6P32786 894 aa7.68□□□□□ -1.18
CSI1YMR025W APC11Q12157 165 aa7.68□□□□□ -1.18
CSI1YMR025W KAE1P36132 386 aa7.67□□□□□ -1.18
CSI1YMR025W TFA2P36145 328 aa7.67□□□□□ -1.18
CSI1YMR025W BIO5P53744 561 aaKnown RBP7.67□□□□□ -1.18
CSI1YMR025W YLR122CQ12312 125 aa7.67□□□□□ -1.18
CSI1YMR025W PAN5P38787 379 aa7.66□□□□□ -1.18
CSI1YMR025W ALD3P54114 506 aa7.66□□□□□ -1.18
CSI1YMR025W TRP3P00937 484 aa7.65□□□□□ -1.18
CSI1YMR025W RPB10P22139 70 aa7.65□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms