RNA–Protein interactions for RNA: YLR234W

TOP3, Transcript of DNA Topoisomerase III, yeastyeast

Gene TOP3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOP3YLR234W HST1P53685 503 aa8.65□□□□□ -1.02
TOP3YLR234W VPS30Q02948 557 aa8.65□□□□□ -1.02
TOP3YLR234W TLG2Q08144 397 aa8.65□□□□□ -1.02
TOP3YLR234W SWI1P09547 1314 aa8.65□□□□□ -1.03
TOP3YLR234W SWC3P31376 625 aa8.64□□□□□ -1.03
TOP3YLR234W BOI2P39969 1040 aa8.64□□□□□ -1.03
TOP3YLR234W PRP31P49704 494 aaPredicted RBP8.64□□□□□ -1.03
TOP3YLR234W KRE33P53914 1056 aaKnown RBP8.64□□□□□ -1.03
TOP3YLR234W SSP2Q08646 371 aa8.64□□□□□ -1.03
TOP3YLR234W RAD3P06839 778 aa8.64□□□□□ -1.03
TOP3YLR234W MSH1P25846 959 aa8.64□□□□□ -1.03
TOP3YLR234W ZUO1P32527 433 aaKnown RBP8.64□□□□□ -1.03
TOP3YLR234W MRPL10P36520 322 aa8.64□□□□□ -1.03
TOP3YLR234W BDP1P46678 594 aa8.64□□□□□ -1.03
TOP3YLR234W VPS64Q03944 604 aa8.64□□□□□ -1.03
TOP3YLR234W PRP40P33203 583 aaKnown RBP8.63□□□□□ -1.03
TOP3YLR234W YJR008WP47085 338 aa8.63□□□□□ -1.03
TOP3YLR234W MRC1P25588 1096 aa8.62□□□□□ -1.03
TOP3YLR234W YMR1P47147 688 aaKnown RBP RIP-Chip data8.62□□□□□ -1.03not detected
TOP3YLR234W YMR074CQ04773 145 aa8.62□□□□□ -1.03
TOP3YLR234W APC11Q12157 165 aa8.62□□□□□ -1.03
TOP3YLR234W YKL068W-AQ3E826 78 aa8.62□□□□□ -1.03
TOP3YLR234W KEX1P09620 729 aa8.62□□□□□ -1.03
TOP3YLR234W DLD1P32891 587 aa8.62□□□□□ -1.03
TOP3YLR234W APL2P36000 726 aaPredicted RBP8.62□□□□□ -1.03
TOP3YLR234W RRP14P36080 434 aaKnown RBP8.62□□□□□ -1.03
TOP3YLR234W DID4P36108 232 aa8.62□□□□□ -1.03
TOP3YLR234W YJL181WP46987 611 aa8.62□□□□□ -1.03
TOP3YLR234W VPS20Q04272 221 aa8.62□□□□□ -1.03
TOP3YLR234W YPR204WQ08995 1032 aa8.62□□□□□ -1.03
TOP3YLR234W PHM7Q12252 991 aa8.62□□□□□ -1.03
TOP3YLR234W UTP10P42945 1769 aaKnown RBP8.62□□□□□ -1.03
TOP3YLR234W PUP2P32379 260 aa8.61□□□□□ -1.03
TOP3YLR234W GCD7P32502 381 aaPredicted RBP8.61□□□□□ -1.03
TOP3YLR234W RRP15Q06511 250 aaPredicted RBP8.61□□□□□ -1.03
TOP3YLR234W ARG8P18544 423 aa8.61□□□□□ -1.03
TOP3YLR234W MPE1P35728 441 aaKnown RBP8.61□□□□□ -1.03
TOP3YLR234W NPR2P39923 615 aa8.61□□□□□ -1.03
TOP3YLR234W CWH41P53008 833 aa8.61□□□□□ -1.03
TOP3YLR234W ERV41Q04651 352 aa8.61□□□□□ -1.03
TOP3YLR234W YNL035CP53962 389 aaKnown RBP8.6□□□□□ -1.03
TOP3YLR234W HRQ1Q05549 1077 aa8.6□□□□□ -1.03
TOP3YLR234W GIN4Q12263 1142 aa8.6□□□□□ -1.03
TOP3YLR234W MSB4Q12317 492 aa8.6□□□□□ -1.03
TOP3YLR234W TOP1P04786 769 aa8.59□□□□□ -1.03
TOP3YLR234W SES1P07284 462 aaKnown RBP8.59□□□□□ -1.03
TOP3YLR234W BIK1P11709 440 aa8.59□□□□□ -1.03
TOP3YLR234W GLN1P32288 370 aaKnown RBP8.59□□□□□ -1.03
TOP3YLR234W MGA2P40578 1113 aa8.59□□□□□ -1.03
TOP3YLR234W YLR271WQ06152 274 aa8.59□□□□□ -1.03
TOP3YLR234W LPD1P09624 499 aaKnown RBP8.59□□□□□ -1.03
TOP3YLR234W SLD2P34252 453 aa8.59□□□□□ -1.03
TOP3YLR234W RIO2P40160 425 aaKnown RBP8.59□□□□□ -1.03
TOP3YLR234W DCD1P06773 312 aa8.58□□□□□ -1.04
TOP3YLR234W SET1P38827 1080 aaKnown RBP8.58□□□□□ -1.04
TOP3YLR234W UBP12P39538 1254 aa8.58□□□□□ -1.04
TOP3YLR234W HGH1P48362 394 aaKnown RBP8.58□□□□□ -1.04
TOP3YLR234W YGL082WP53155 381 aa8.58□□□□□ -1.04
TOP3YLR234W GRE2Q12068 342 aaKnown RBP8.58□□□□□ -1.04
TOP3YLR234W RFC1P38630 861 aaKnown RBP8.57□□□□□ -1.04
TOP3YLR234W PXR1P53335 271 aaPredicted RBP8.57□□□□□ -1.04
TOP3YLR234W SSL2Q00578 843 aa8.57□□□□□ -1.04
TOP3YLR234W NKP2Q06162 153 aa8.57□□□□□ -1.04
TOP3YLR234W YVC1Q12324 675 aa8.57□□□□□ -1.04
TOP3YLR234W GYL1Q04322 720 aa8.57□□□□□ -1.04
TOP3YLR234W YPL225WQ08971 146 aaKnown RBP8.57□□□□□ -1.04
TOP3YLR234W RAD50P12753 1312 aa8.57□□□□□ -1.04
TOP3YLR234W SER1P33330 395 aaKnown RBP8.56□□□□□ -1.04
TOP3YLR234W NDC80P40460 691 aa8.56□□□□□ -1.04
TOP3YLR234W PKH1Q03407 766 aa8.56□□□□□ -1.04
TOP3YLR234W UBP1P25037 809 aa8.55□□□□□ -1.04
TOP3YLR234W BUD31P25337 157 aaPredicted RBP8.55□□□□□ -1.04
TOP3YLR234W NYV1Q12255 253 aa8.55□□□□□ -1.04
TOP3YLR234W RPS0AP32905 252 aaKnown RBP8.55□□□□□ -1.04
TOP3YLR234W HYR1P40581 163 aaKnown RBP8.55□□□□□ -1.04
TOP3YLR234W RSC8P43609 557 aaKnown RBP8.55□□□□□ -1.04
TOP3YLR234W GCR2Q01722 534 aa8.55□□□□□ -1.04
TOP3YLR234W FCP1Q03254 732 aa8.55□□□□□ -1.04
TOP3YLR234W TAF13P11747 167 aa8.54□□□□□ -1.04
TOP3YLR234W KAR3P17119 729 aa8.54□□□□□ -1.04
TOP3YLR234W JSN1P47135 1091 aaKnown RBP RIP-Chip data8.54□□□□□ -1.04not detected
TOP3YLR234W CDC16P09798 840 aa8.53□□□□□ -1.04
TOP3YLR234W SEC14P24280 304 aaKnown RBP8.53□□□□□ -1.04
TOP3YLR234W BRN1P38170 754 aa8.53□□□□□ -1.04
TOP3YLR234W PEX19Q07418 342 aa8.53□□□□□ -1.04
TOP3YLR234W DPH5P32469 300 aaPredicted RBP8.53□□□□□ -1.04
TOP3YLR234W SAP1P39955 897 aaKnown RBP8.53□□□□□ -1.04
TOP3YLR234W HOS4P40480 1083 aa8.53□□□□□ -1.04
TOP3YLR234W MVP1P40959 511 aaKnown RBP8.53□□□□□ -1.04
TOP3YLR234W AAD16Q02895 342 aa8.53□□□□□ -1.04
TOP3YLR234W RNR2P09938 399 aaKnown RBP8.52□□□□□ -1.05
TOP3YLR234W RPC82P32349 654 aa8.52□□□□□ -1.05
TOP3YLR234W HXT10P43581 546 aa8.52□□□□□ -1.05
TOP3YLR234W LYS4P49367 693 aaPredicted RBP8.52□□□□□ -1.05
TOP3YLR234W SLP1Q12232 587 aa8.52□□□□□ -1.05
TOP3YLR234W PET111P08468 800 aa8.52□□□□□ -1.05
TOP3YLR234W DSF2P38213 736 aa8.52□□□□□ -1.05
TOP3YLR234W OLA1P38219 394 aaKnown RBP8.52□□□□□ -1.05
TOP3YLR234W SSF1P38789 453 aaPredicted RBP8.52□□□□□ -1.05
TOP3YLR234W BUG1Q12191 341 aa8.52□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms