RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W MET6P05694 767 aaKnown RBP3.23□□□□□ -1.89
SDC25YLL016W MNN1P39106 762 aa3.23□□□□□ -1.89
SDC25YLL016W SET4P42948 560 aa3.23□□□□□ -1.89
SDC25YLL016W RTF1P53064 558 aa3.23□□□□□ -1.89
SDC25YLL016W SSF2Q12153 453 aaPredicted RBP3.23□□□□□ -1.89
SDC25YLL016W MSB4Q12317 492 aa3.23□□□□□ -1.89
SDC25YLL016W YDL206WQ12424 762 aa3.23□□□□□ -1.89
SDC25YLL016W TRS33Q99394 268 aa3.23□□□□□ -1.89
SDC25YLL016W PDR1P12383 1068 aa3.22□□□□□ -1.89
SDC25YLL016W TEC1P18412 486 aa3.22□□□□□ -1.89
SDC25YLL016W FKH1P40466 484 aa3.22□□□□□ -1.89
SDC25YLL016W YOL057WQ08225 711 aa3.22□□□□□ -1.89
SDC25YLL016W TSC13Q99190 310 aa3.22□□□□□ -1.89
SDC25YLL016W KEX2P13134 814 aa3.22□□□□□ -1.89
SDC25YLL016W GUT2P32191 649 aa3.22□□□□□ -1.89
SDC25YLL016W PBP2P38151 413 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
SDC25YLL016W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
SDC25YLL016W PIN2Q12057 282 aa3.22□□□□□ -1.89
SDC25YLL016W NAB3P38996 802 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
SDC25YLL016W GRX7P38068 203 aa3.21□□□□□ -1.9
SDC25YLL016W RPS26AP39938 119 aaKnown RBP3.21□□□□□ -1.9
SDC25YLL016W RPS26BP39939 119 aaKnown RBP3.21□□□□□ -1.9
SDC25YLL016W TPM2P40414 161 aa3.21□□□□□ -1.9
SDC25YLL016W SPR3P41901 512 aa3.21□□□□□ -1.9
SDC25YLL016W RPN4Q03465 531 aa3.21□□□□□ -1.9
SDC25YLL016W PET112P33893 541 aa3.21□□□□□ -1.9
SDC25YLL016W TIF11P38912 153 aaKnown RBP3.21□□□□□ -1.9
SDC25YLL016W CWH41P53008 833 aa3.21□□□□□ -1.9
SDC25YLL016W RAM1P22007 431 aa3.2□□□□□ -1.9
SDC25YLL016W GCD6P32501 712 aaKnown RBP3.2□□□□□ -1.9
SDC25YLL016W TRS120Q04183 1289 aa3.2□□□□□ -1.9
SDC25YLL016W FRA1Q07825 749 aa3.2□□□□□ -1.9
SDC25YLL016W NPL4P33755 580 aa3.2□□□□□ -1.9
SDC25YLL016W YEL023CP39992 682 aa3.2□□□□□ -1.9
SDC25YLL016W MSH4P40965 878 aaPredicted RBP3.2□□□□□ -1.9
SDC25YLL016W ESF1Q06344 628 aaKnown RBP3.2□□□□□ -1.9
SDC25YLL016W GIN4Q12263 1142 aa3.2□□□□□ -1.9
SDC25YLL016W NUP188P52593 1655 aaKnown RBP3.2□□□□□ -1.9
SDC25YLL016W RMD1Q03441 430 aa3.19□□□□□ -1.9
SDC25YLL016W PTC4P38089 393 aa3.19□□□□□ -1.9
SDC25YLL016W DAK2P43550 591 aa3.19□□□□□ -1.9
SDC25YLL016W YJR142WP47173 342 aa3.19□□□□□ -1.9
SDC25YLL016W FOX2Q02207 900 aaKnown RBP3.19□□□□□ -1.9
SDC25YLL016W CBC2Q08920 208 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
SDC25YLL016W YBT1P32386 1661 aa3.19□□□□□ -1.9
SDC25YLL016W GRX4P32642 244 aa3.19□□□□□ -1.9
SDC25YLL016W YFL034WP43564 1073 aa3.19□□□□□ -1.9
SDC25YLL016W HUL5P53119 910 aa3.19□□□□□ -1.9
SDC25YLL016W TPO2P53283 614 aa3.19□□□□□ -1.9
SDC25YLL016W ERF2Q06551 359 aa3.19□□□□□ -1.9
SDC25YLL016W BDF2Q07442 638 aa3.19□□□□□ -1.9
SDC25YLL016W OXR1Q08952 273 aa3.19□□□□□ -1.9
SDC25YLL016W LDB19Q12502 818 aa3.19□□□□□ -1.9
SDC25YLL016W PHO4P07270 312 aaKnown RBP3.18□□□□□ -1.9
SDC25YLL016W YEN1P40028 759 aa3.18□□□□□ -1.9
SDC25YLL016W AIM9P40053 627 aaKnown RBP3.18□□□□□ -1.9
SDC25YLL016W NUP82P40368 713 aa3.18□□□□□ -1.9
SDC25YLL016W MTO1P53070 669 aa3.18□□□□□ -1.9
SDC25YLL016W NUD1P32336 851 aa3.18□□□□□ -1.9
SDC25YLL016W PMC1P38929 1173 aaPredicted RBP3.18□□□□□ -1.9
SDC25YLL016W FIG4P42837 879 aa3.18□□□□□ -1.9
SDC25YLL016W TIM54P47045 478 aa3.18□□□□□ -1.9
SDC25YLL016W YGL081WP53156 320 aa3.18□□□□□ -1.9
SDC25YLL016W TUB4P53378 473 aa3.18□□□□□ -1.9
SDC25YLL016W UTP14Q04500 899 aaKnown RBP3.18□□□□□ -1.9
SDC25YLL016W UTP13Q05946 817 aaKnown RBP3.18□□□□□ -1.9
SDC25YLL016W LSO1Q3E827 93 aa3.18□□□□□ -1.9
SDC25YLL016W PRI2P20457 528 aa3.17□□□□□ -1.9
SDC25YLL016W GRX1P25373 110 aaKnown RBP3.17□□□□□ -1.9
SDC25YLL016W ZDS1P50111 915 aaKnown RBP3.17□□□□□ -1.9
SDC25YLL016W ALR1Q08269 859 aa3.17□□□□□ -1.9
SDC25YLL016W NOP2P40991 618 aaKnown RBP3.17□□□□□ -1.9
SDC25YLL016W BUD6P41697 788 aa3.17□□□□□ -1.9
SDC25YLL016W MID1P41821 548 aa3.17□□□□□ -1.9
SDC25YLL016W GDE1Q02979 1223 aa3.17□□□□□ -1.9
SDC25YLL016W ECM16Q04217 1267 aaKnown RBP3.17□□□□□ -1.9
SDC25YLL016W DPL1Q05567 589 aa3.17□□□□□ -1.9
SDC25YLL016W BDS1Q08347 646 aa3.17□□□□□ -1.9
SDC25YLL016W YSP2Q06681 1438 aa3.17□□□□□ -1.9
SDC25YLL016W PHO8P11491 566 aa3.17□□□□□ -1.9
SDC25YLL016W KAR1P11927 433 aa3.17□□□□□ -1.9
SDC25YLL016W ISC10P32645 267 aa3.17□□□□□ -1.9
SDC25YLL016W YHL008CP38750 627 aa3.17□□□□□ -1.9
SDC25YLL016W UFD2P54860 961 aa3.17□□□□□ -1.9
SDC25YLL016W ISR1Q06098 443 aaKnown RBP3.17□□□□□ -1.9
SDC25YLL016W GPI13Q07830 1017 aa3.17□□□□□ -1.9
SDC25YLL016W CAT8P39113 1433 aa3.17□□□□□ -1.9
SDC25YLL016W IML1P47170 1584 aa3.16□□□□□ -1.9
SDC25YLL016W RAD4P14736 754 aa3.16□□□□□ -1.9
SDC25YLL016W SRM1P21827 482 aa3.16□□□□□ -1.9
SDC25YLL016W RPB10P22139 70 aa3.16□□□□□ -1.9
SDC25YLL016W TIM23P32897 222 aa3.16□□□□□ -1.9
SDC25YLL016W MNR2P35724 969 aa3.16□□□□□ -1.9
SDC25YLL016W TDA5Q06417 326 aaKnown RBP3.16□□□□□ -1.9
SDC25YLL016W VMR1P38735 1592 aa3.16□□□□□ -1.9
SDC25YLL016W THI4P32318 326 aa3.16□□□□□ -1.9
SDC25YLL016W NTH2P35172 780 aa3.16□□□□□ -1.9
SDC25YLL016W BOI1P38041 980 aaKnown RBP3.16□□□□□ -1.9
SDC25YLL016W CRP1P38845 465 aaKnown RBP3.16□□□□□ -1.9
SDC25YLL016W SUT1P53032 299 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms