RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W PHO87P25360 923 aa1.85□□□□□ -2.11
PRP16YKR086W TGL4P36165 910 aa1.85□□□□□ -2.11
PRP16YKR086W ECM2P38241 364 aaKnown RBP1.85□□□□□ -2.11
PRP16YKR086W TY1A-DR2Q03964 440 aaKnown RBP1.85□□□□□ -2.11
PRP16YKR086W UTP4Q06679 776 aaKnown RBP1.85□□□□□ -2.11
PRP16YKR086W YOR093CQ12275 1648 aa1.85□□□□□ -2.11
PRP16YKR086W GAL2P13181 574 aa1.84□□□□□ -2.11
PRP16YKR086W SBE2P42223 864 aaKnown RBP1.84□□□□□ -2.11
PRP16YKR086W ICP55P40051 511 aa1.84□□□□□ -2.12
PRP16YKR086W YNR040WP53736 256 aa1.84□□□□□ -2.12
PRP16YKR086W CWC15Q03772 175 aaKnown RBP1.84□□□□□ -2.12
PRP16YKR086W RGP1P16664 663 aa1.83□□□□□ -2.12
PRP16YKR086W MRPL16P38064 232 aa1.83□□□□□ -2.12
PRP16YKR086W CCT8P47079 568 aaKnown RBP1.83□□□□□ -2.12
PRP16YKR086W YML083CQ04526 418 aa1.83□□□□□ -2.12
PRP16YKR086W ESP1Q03018 1630 aa1.83□□□□□ -2.12
PRP16YKR086W PDC5P16467 563 aaKnown RBP1.83□□□□□ -2.12
PRP16YKR086W KRE33P53914 1056 aaKnown RBP1.83□□□□□ -2.12
PRP16YKR086W KNS1P32350 737 aaPredicted RBP1.83□□□□□ -2.12
PRP16YKR086W BOI1P38041 980 aaKnown RBP1.83□□□□□ -2.12
PRP16YKR086W ITC1P53125 1264 aa1.83□□□□□ -2.12
PRP16YKR086W ADE12P80210 433 aaKnown RBP1.83□□□□□ -2.12
PRP16YKR086W GAS4Q08271 471 aa1.83□□□□□ -2.12
PRP16YKR086W APC11Q12157 165 aa1.83□□□□□ -2.12
PRP16YKR086W TRS33Q99394 268 aa1.83□□□□□ -2.12
PRP16YKR086W RPA190P10964 1664 aaKnown RBP1.82□□□□□ -2.12
PRP16YKR086W SSA1P10591 642 aaKnown RBP1.82□□□□□ -2.12
PRP16YKR086W KAR5Q04746 504 aa1.82□□□□□ -2.12
PRP16YKR086W YDR215CQ12240 137 aa1.82□□□□□ -2.12
PRP16YKR086W Q0182Q9ZZW1 134 aa1.82□□□□□ -2.12
PRP16YKR086W CYT1P07143 309 aa1.82□□□□□ -2.12
PRP16YKR086W HVG1P0CE11 249 aa1.82□□□□□ -2.12
PRP16YKR086W GRS1P38088 690 aaKnown RBP1.82□□□□□ -2.12
PRP16YKR086W YBR197CP38306 217 aa1.82□□□□□ -2.12
PRP16YKR086W SUT1P53032 299 aaKnown RBP1.82□□□□□ -2.12
PRP16YKR086W SLD2P34252 453 aa1.81□□□□□ -2.12
PRP16YKR086W MCX1P38323 520 aaPredicted RBP1.81□□□□□ -2.12
PRP16YKR086W PRK1P40494 810 aa1.81□□□□□ -2.12
PRP16YKR086W CUS1Q02554 436 aaPredicted RBP1.81□□□□□ -2.12
PRP16YKR086W MTC5Q03897 1148 aa1.81□□□□□ -2.12
PRP16YKR086W TDA6Q06466 467 aa1.81□□□□□ -2.12
PRP16YKR086W HAT1Q12341 374 aa1.81□□□□□ -2.12
PRP16YKR086W HAP4P14064 554 aa1.81□□□□□ -2.12
PRP16YKR086W IDI1P15496 288 aa1.81□□□□□ -2.12
PRP16YKR086W PGM1P33401 570 aaKnown RBP1.81□□□□□ -2.12
PRP16YKR086W CEM1P39525 442 aa1.81□□□□□ -2.12
PRP16YKR086W YMR265CQ03508 461 aaKnown RBP1.81□□□□□ -2.12
PRP16YKR086W FUR4P05316 633 aaKnown RBP1.81□□□□□ -2.12
PRP16YKR086W NAR1P23503 491 aaKnown RBP1.81□□□□□ -2.12
PRP16YKR086W CDC3P32457 520 aaKnown RBP1.81□□□□□ -2.12
PRP16YKR086W SIS2P36024 562 aa1.81□□□□□ -2.12
PRP16YKR086W SLN1P39928 1220 aaPredicted RBP1.81□□□□□ -2.12
PRP16YKR086W YER156CP40093 338 aaKnown RBP1.81□□□□□ -2.12
PRP16YKR086W MTO1P53070 669 aa1.81□□□□□ -2.12
PRP16YKR086W STB3Q12427 513 aa1.81□□□□□ -2.12
PRP16YKR086W MRPL33P20084 86 aa1.8□□□□□ -2.12
PRP16YKR086W RRN6P32786 894 aa1.8□□□□□ -2.12
PRP16YKR086W ATG14P38270 344 aa1.8□□□□□ -2.12
PRP16YKR086W AMN1P38285 549 aaPredicted RBP1.8□□□□□ -2.12
PRP16YKR086W HSL1P34244 1518 aa1.8□□□□□ -2.12
PRP16YKR086W HIR3P47171 1648 aa1.8□□□□□ -2.12
PRP16YKR086W VMA3P25515 160 aa1.8□□□□□ -2.12
PRP16YKR086W SCD5P34758 872 aa1.8□□□□□ -2.12
PRP16YKR086W GLO3P38682 493 aaKnown RBP1.8□□□□□ -2.12
PRP16YKR086W FIR1P40020 876 aa1.8□□□□□ -2.12
PRP16YKR086W CTR9P89105 1077 aa1.8□□□□□ -2.12
PRP16YKR086W ATG2P53855 1592 aa1.8□□□□□ -2.12
PRP16YKR086W RKR1Q04781 1562 aa1.8□□□□□ -2.12
PRP16YKR086W YCF1P39109 1515 aaKnown RBP1.8□□□□□ -2.12
PRP16YKR086W BUD4P47136 1447 aa1.8□□□□□ -2.12
PRP16YKR086W COBP00163 385 aa1.79□□□□□ -2.12
PRP16YKR086W PEP7P32609 515 aa1.79□□□□□ -2.12
PRP16YKR086W BSD2P38356 321 aa1.79□□□□□ -2.12
PRP16YKR086W RGD2P43556 714 aa1.79□□□□□ -2.12
PRP16YKR086W ALD4P46367 519 aaKnown RBP1.79□□□□□ -2.12
PRP16YKR086W PHM7Q12252 991 aa1.79□□□□□ -2.12
PRP16YKR086W EDE1P34216 1381 aa1.79□□□□□ -2.12
PRP16YKR086W AI1P03875 834 aa1.79□□□□□ -2.12
PRP16YKR086W TFA2P36145 328 aa1.79□□□□□ -2.12
PRP16YKR086W APM2P38700 605 aa1.79□□□□□ -2.12
PRP16YKR086W BOL3P39724 118 aa1.79□□□□□ -2.12
PRP16YKR086W QDR2P40474 542 aa1.79□□□□□ -2.12
PRP16YKR086W GIS4Q04233 774 aa1.79□□□□□ -2.12
PRP16YKR086W THI72Q08579 599 aa1.79□□□□□ -2.12
PRP16YKR086W FPS1P23900 669 aa1.79□□□□□ -2.12
PRP16YKR086W ISC10P32645 267 aa1.79□□□□□ -2.12
PRP16YKR086W KAP122P32767 1081 aa1.79□□□□□ -2.12
PRP16YKR086W YJL181WP46987 611 aa1.79□□□□□ -2.12
PRP16YKR086W NSG2P53898 299 aa1.79□□□□□ -2.12
PRP16YKR086W EMG1Q06287 252 aaKnown RBP1.79□□□□□ -2.12
PRP16YKR086W SUB2Q07478 446 aaKnown RBP1.79□□□□□ -2.12
PRP16YKR086W MCA1Q08601 432 aa1.79□□□□□ -2.12
PRP16YKR086W MNL2Q12205 849 aa1.79□□□□□ -2.12
PRP16YKR086W CDC25P04821 1589 aa1.79□□□□□ -2.12
PRP16YKR086W NTE1Q04958 1679 aa1.78□□□□□ -2.12
PRP16YKR086W BNI1P41832 1953 aa1.78□□□□□ -2.12
PRP16YKR086W MSN1P22148 382 aa1.78□□□□□ -2.12
PRP16YKR086W BUD9P53226 547 aa1.78□□□□□ -2.12
PRP16YKR086W PUF6Q04373 656 aaKnown RBP1.78□□□□□ -2.12
PRP16YKR086W YOR296WQ08748 1289 aa1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 59.2 ms