RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W DYS1P38791 387 aa7.31□□□□□ -1.24
PTM1YKL039W KRE33P53914 1056 aaKnown RBP7.31□□□□□ -1.24
PTM1YKL039W CUS1Q02554 436 aaPredicted RBP7.31□□□□□ -1.24
PTM1YKL039W YBL113CQ7M4S9 792 aa7.31□□□□□ -1.24
PTM1YKL039W TRL1P09880 827 aaKnown RBP7.3□□□□□ -1.24
PTM1YKL039W LDH1P38139 375 aa7.3□□□□□ -1.24
PTM1YKL039W ERP5P38819 212 aa7.3□□□□□ -1.24
PTM1YKL039W YDR461C-AQ2V2P7 80 aa7.3□□□□□ -1.24
PTM1YKL039W CEM1P39525 442 aa7.29□□□□□ -1.24
PTM1YKL039W QDR1P40475 563 aa7.29□□□□□ -1.24
PTM1YKL039W HPF1Q05164 967 aa7.29□□□□□ -1.24
PTM1YKL039W SYT1Q06836 1226 aa7.29□□□□□ -1.24
PTM1YKL039W NAB2P32505 525 aaKnown RBP RIP-Chip data7.28□□□□□ -1.24not detected
PTM1YKL039W BSD2P38356 321 aa7.28□□□□□ -1.24
PTM1YKL039W SUT1P53032 299 aaKnown RBP7.28□□□□□ -1.24
PTM1YKL039W YOR296WQ08748 1289 aa7.28□□□□□ -1.24
PTM1YKL039W GRS1P38088 690 aaKnown RBP7.27□□□□□ -1.25
PTM1YKL039W HXT8P40886 569 aa7.27□□□□□ -1.25
PTM1YKL039W ADE12P80210 433 aaKnown RBP7.27□□□□□ -1.25
PTM1YKL039W MSN1P22148 382 aa7.26□□□□□ -1.25
PTM1YKL039W MSC7P38694 644 aa7.26□□□□□ -1.25
PTM1YKL039W MDJ2P42834 146 aa7.26□□□□□ -1.25
PTM1YKL039W JJJ3P47138 172 aa7.26□□□□□ -1.25
PTM1YKL039W LYS5P50113 272 aa7.26□□□□□ -1.25
PTM1YKL039W YGR035CP53222 116 aa7.26□□□□□ -1.25
PTM1YKL039W RPP1AP05318 106 aaPredicted RBP7.25□□□□□ -1.25
PTM1YKL039W ACF4P47129 309 aa7.25□□□□□ -1.25
PTM1YKL039W FPS1P23900 669 aa7.25□□□□□ -1.25
PTM1YKL039W GIP1P38229 639 aa7.25□□□□□ -1.25
PTM1YKL039W YNR040WP53736 256 aa7.25□□□□□ -1.25
PTM1YKL039W APM2P38700 605 aa7.24□□□□□ -1.25
PTM1YKL039W ITC1P53125 1264 aa7.24□□□□□ -1.25
PTM1YKL039W YML020WQ03722 664 aa7.24□□□□□ -1.25
PTM1YKL039W ISW1P38144 1129 aa7.23□□□□□ -1.25
PTM1YKL039W NCL1P38205 684 aaKnown RBP7.23□□□□□ -1.25
PTM1YKL039W DPH6Q12429 685 aa7.23□□□□□ -1.25
PTM1YKL039W TY1A-DR2Q03964 440 aaKnown RBP7.22□□□□□ -1.25
PTM1YKL039W RGD2P43556 714 aa7.21□□□□□ -1.25
PTM1YKL039W SMC1P32908 1225 aa7.2□□□□□ -1.26
PTM1YKL039W HEH2Q03281 663 aa7.2□□□□□ -1.26
PTM1YKL039W TRS120Q04183 1289 aa7.2□□□□□ -1.26
PTM1YKL039W NOP8Q08287 484 aaPredicted RBP7.2□□□□□ -1.26
PTM1YKL039W FRT1Q99332 602 aa7.2□□□□□ -1.26
PTM1YKL039W NTA1P40354 457 aa7.2□□□□□ -1.26
PTM1YKL039W UFD2P54860 961 aa7.2□□□□□ -1.26
PTM1YKL039W NUT2Q06213 157 aa7.2□□□□□ -1.26
PTM1YKL039W RAD55P38953 406 aa7.19□□□□□ -1.26
PTM1YKL039W FIR1P40020 876 aa7.19□□□□□ -1.26
PTM1YKL039W IDI1P15496 288 aa7.18□□□□□ -1.26
PTM1YKL039W YHL050CP38721 697 aa7.18□□□□□ -1.26
PTM1YKL039W YHR219WP38900 624 aa7.18□□□□□ -1.26
PTM1YKL039W YER156CP40093 338 aaKnown RBP7.18□□□□□ -1.26
PTM1YKL039W PRK1P40494 810 aa7.18□□□□□ -1.26
PTM1YKL039W TIF6Q12522 245 aaKnown RBP7.18□□□□□ -1.26
PTM1YKL039W SEN54Q02825 467 aaPredicted RBP7.17□□□□□ -1.26
PTM1YKL039W EMG1Q06287 252 aaKnown RBP7.17□□□□□ -1.26
PTM1YKL039W MON2P48563 1636 aaPredicted RBP7.16□□□□□ -1.26
PTM1YKL039W GPM1P00950 247 aaKnown RBP7.16□□□□□ -1.26
PTM1YKL039W STM1P39015 273 aaKnown RBP7.16□□□□□ -1.26
PTM1YKL039W YIL165CP40446 119 aa7.16□□□□□ -1.26
PTM1YKL039W MNL2Q12205 849 aa7.16□□□□□ -1.26
PTM1YKL039W IRS4P36115 615 aaKnown RBP7.16□□□□□ -1.26
PTM1YKL039W PDC5P16467 563 aaKnown RBP7.15□□□□□ -1.27
PTM1YKL039W TRK2P28584 889 aa7.15□□□□□ -1.27
PTM1YKL039W PSY2P40164 858 aa7.15□□□□□ -1.27
PTM1YKL039W YBR287WP38355 427 aa7.14□□□□□ -1.27
PTM1YKL039W AIM46P38885 310 aa7.14□□□□□ -1.27
PTM1YKL039W KNS1P32350 737 aaPredicted RBP7.13□□□□□ -1.27
PTM1YKL039W GPI13Q07830 1017 aa7.13□□□□□ -1.27
PTM1YKL039W PPX1P38698 397 aa7.12□□□□□ -1.27
PTM1YKL039W PPT1P53043 513 aa7.12□□□□□ -1.27
PTM1YKL039W MSC6Q08818 692 aaKnown RBP7.12□□□□□ -1.27
PTM1YKL039W MRP10O75012 95 aa7.12□□□□□ -1.27
PTM1YKL039W RSC4Q02206 625 aa7.12□□□□□ -1.27
PTM1YKL039W WHI5Q12416 295 aa7.11□□□□□ -1.27
PTM1YKL039W SLD2P34252 453 aa7.1□□□□□ -1.27
PTM1YKL039W IPL1P38991 367 aa7.1□□□□□ -1.27
PTM1YKL039W YNL011CP53980 444 aa7.1□□□□□ -1.27
PTM1YKL039W CDC55Q00362 526 aa7.1□□□□□ -1.27
PTM1YKL039W RSC2Q06488 889 aa7.1□□□□□ -1.27
PTM1YKL039W SEC20P28791 383 aa7.09□□□□□ -1.27
PTM1YKL039W INO80P53115 1489 aa7.08□□□□□ -1.28
PTM1YKL039W AI1P03875 834 aa7.07□□□□□ -1.28
PTM1YKL039W YJL181WP46987 611 aa7.07□□□□□ -1.28
PTM1YKL039W CTR9P89105 1077 aa7.07□□□□□ -1.28
PTM1YKL039W PYC2P32327 1180 aaKnown RBP7.06□□□□□ -1.28
PTM1YKL039W MET4P32389 672 aa7.06□□□□□ -1.28
PTM1YKL039W ALD3P54114 506 aa7.06□□□□□ -1.28
PTM1YKL039W BSC2Q05611 235 aa7.06□□□□□ -1.28
PTM1YKL039W COBP00163 385 aa7.05□□□□□ -1.28
PTM1YKL039W FUS1P11710 512 aa7.05□□□□□ -1.28
PTM1YKL039W GIS4Q04233 774 aa7.05□□□□□ -1.28
PTM1YKL039W NAR1P23503 491 aaKnown RBP7.04□□□□□ -1.28
PTM1YKL039W TFA2P36145 328 aa7.04□□□□□ -1.28
PTM1YKL039W INP51P40559 946 aaKnown RBP7.04□□□□□ -1.28
PTM1YKL039W SBE2P42223 864 aaKnown RBP7.04□□□□□ -1.28
PTM1YKL039W YFL066CP43538 392 aa7.04□□□□□ -1.28
PTM1YKL039W PGM2P37012 569 aaKnown RBP7.03□□□□□ -1.28
PTM1YKL039W THI12P42883 340 aa7.03□□□□□ -1.28
PTM1YKL039W THI5P43534 340 aa7.03□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms