RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W VMA3P25515 160 aa7.74□□□□□ -1.17
SEC28YIL076W NSG2P53898 299 aa7.74□□□□□ -1.17
SEC28YIL076W THI72Q08579 599 aa7.73□□□□□ -1.17
SEC28YIL076W NCL1P38205 684 aaKnown RBP7.72□□□□□ -1.17
SEC28YIL076W PNP1Q05788 311 aa7.72□□□□□ -1.17
SEC28YIL076W PDC5P16467 563 aaKnown RBP7.71□□□□□ -1.18
SEC28YIL076W SBE2P42223 864 aaKnown RBP7.71□□□□□ -1.18
SEC28YIL076W YFL066CP43538 392 aa7.71□□□□□ -1.18
SEC28YIL076W DYS1P38791 387 aa7.7□□□□□ -1.18
SEC28YIL076W YNR040WP53736 256 aa7.7□□□□□ -1.18
SEC28YIL076W HEH2Q03281 663 aa7.7□□□□□ -1.18
SEC28YIL076W KNS1P32350 737 aaPredicted RBP7.69□□□□□ -1.18
SEC28YIL076W APM2P38700 605 aa7.69□□□□□ -1.18
SEC28YIL076W ICP55P40051 511 aa7.69□□□□□ -1.18
SEC28YIL076W PHM7Q12252 991 aa7.69□□□□□ -1.18
SEC28YIL076W NAB2P32505 525 aaKnown RBP RIP-Chip data7.68□□□□□ -1.18not detected
SEC28YIL076W LDH1P38139 375 aa7.68□□□□□ -1.18
SEC28YIL076W BSD2P38356 321 aa7.68□□□□□ -1.18
SEC28YIL076W RPL34AP87262 121 aaPredicted RBP7.68□□□□□ -1.18
SEC28YIL076W PRK1P40494 810 aa7.67□□□□□ -1.18
SEC28YIL076W YOR296WQ08748 1289 aa7.67□□□□□ -1.18
SEC28YIL076W PUS1Q12211 544 aaKnown RBP7.67□□□□□ -1.18
SEC28YIL076W RRN6P32786 894 aa7.66□□□□□ -1.18
SEC28YIL076W YNR014WP53719 212 aa7.66□□□□□ -1.18
SEC28YIL076W SSA1P10591 642 aaKnown RBP7.65□□□□□ -1.18
SEC28YIL076W BOI1P38041 980 aaKnown RBP7.65□□□□□ -1.18
SEC28YIL076W ITC1P53125 1264 aa7.65□□□□□ -1.18
SEC28YIL076W TDA6Q06466 467 aa7.65□□□□□ -1.18
SEC28YIL076W GIP1P38229 639 aa7.64□□□□□ -1.19
SEC28YIL076W BOL3P39724 118 aa7.63□□□□□ -1.19
SEC28YIL076W FUR4P05316 633 aaKnown RBP7.62□□□□□ -1.19
SEC28YIL076W IDI1P15496 288 aa7.62□□□□□ -1.19
SEC28YIL076W MSN1P22148 382 aa7.62□□□□□ -1.19
SEC28YIL076W ISW1P38144 1129 aa7.62□□□□□ -1.19
SEC28YIL076W BOI2P39969 1040 aa7.62□□□□□ -1.19
SEC28YIL076W RPB10P22139 70 aa7.61□□□□□ -1.19
SEC28YIL076W KTR2P33550 425 aa7.61□□□□□ -1.19
SEC28YIL076W MET1P36150 593 aa7.61□□□□□ -1.19
SEC28YIL076W SUT1P53032 299 aaKnown RBP7.61□□□□□ -1.19
SEC28YIL076W MTC5Q03897 1148 aa7.61□□□□□ -1.19
SEC28YIL076W APC11Q12157 165 aa7.61□□□□□ -1.19
SEC28YIL076W YPR053CQ6Q5F3 151 aa7.61□□□□□ -1.19
SEC28YIL076W HXT8P40886 569 aa7.6□□□□□ -1.19
SEC28YIL076W LSO1Q3E827 93 aa7.6□□□□□ -1.19
SEC28YIL076W YER156CP40093 338 aaKnown RBP7.59□□□□□ -1.19
SEC28YIL076W MRP10O75012 95 aa7.58□□□□□ -1.2
SEC28YIL076W ALG14P38242 237 aa7.58□□□□□ -1.2
SEC28YIL076W MCX1P38323 520 aaPredicted RBP7.58□□□□□ -1.2
SEC28YIL076W KAR5Q04746 504 aa7.58□□□□□ -1.2
SEC28YIL076W PGM2P37012 569 aaKnown RBP7.57□□□□□ -1.2
SEC28YIL076W FIR1P40020 876 aa7.57□□□□□ -1.2
SEC28YIL076W YIL165CP40446 119 aa7.56□□□□□ -1.2
SEC28YIL076W YMR187CQ03236 431 aa7.56□□□□□ -1.2
SEC28YIL076W NAR1P23503 491 aaKnown RBP7.55□□□□□ -1.2
SEC28YIL076W GIS4Q04233 774 aa7.55□□□□□ -1.2
SEC28YIL076W GEF1P37020 779 aa7.54□□□□□ -1.2
SEC28YIL076W GLO3P38682 493 aaKnown RBP7.54□□□□□ -1.2
SEC28YIL076W RGD2P43556 714 aa7.54□□□□□ -1.2
SEC28YIL076W LSB3P43603 459 aaKnown RBP7.54□□□□□ -1.2
SEC28YIL076W PPT1P53043 513 aa7.54□□□□□ -1.2
SEC28YIL076W EMG1Q06287 252 aaKnown RBP7.54□□□□□ -1.2
SEC28YIL076W NHA1Q99271 985 aa7.54□□□□□ -1.2
SEC28YIL076W YCK2P23292 546 aaKnown RBP7.52□□□□□ -1.21
SEC28YIL076W YBR287WP38355 427 aa7.52□□□□□ -1.21
SEC28YIL076W SKN7P38889 622 aa7.52□□□□□ -1.21
SEC28YIL076W TAF7Q05021 590 aa7.52□□□□□ -1.21
SEC28YIL076W RSC2Q06488 889 aa7.52□□□□□ -1.21
SEC28YIL076W YDR215CQ12240 137 aa7.52□□□□□ -1.21
SEC28YIL076W CDC3P32457 520 aaKnown RBP7.51□□□□□ -1.21
SEC28YIL076W AIM46P38885 310 aa7.51□□□□□ -1.21
SEC28YIL076W RAD55P38953 406 aa7.51□□□□□ -1.21
SEC28YIL076W NTA1P40354 457 aa7.51□□□□□ -1.21
SEC28YIL076W QDR1P40475 563 aa7.51□□□□□ -1.21
SEC28YIL076W YJL181WP46987 611 aa7.51□□□□□ -1.21
SEC28YIL076W SMC1P32908 1225 aa7.5□□□□□ -1.21
SEC28YIL076W SLN1P39928 1220 aaPredicted RBP7.5□□□□□ -1.21
SEC28YIL076W TIF6Q12522 245 aaKnown RBP7.5□□□□□ -1.21
SEC28YIL076W CCT8P47079 568 aaKnown RBP7.49□□□□□ -1.21
SEC28YIL076W ATG1P53104 897 aa7.49□□□□□ -1.21
SEC28YIL076W PRY1P47032 299 aa7.48□□□□□ -1.21
SEC28YIL076W IRS4P36115 615 aaKnown RBP7.47□□□□□ -1.21
SEC28YIL076W PSY2P40164 858 aa7.46□□□□□ -1.22
SEC28YIL076W INP51P40559 946 aaKnown RBP7.45□□□□□ -1.22
SEC28YIL076W SLP1Q12232 587 aa7.45□□□□□ -1.22
SEC28YIL076W TAT1P38085 619 aa7.44□□□□□ -1.22
SEC28YIL076W RRM3P38766 723 aa7.44□□□□□ -1.22
SEC28YIL076W TED1P40533 473 aa7.44□□□□□ -1.22
SEC28YIL076W SOK2P53438 785 aaPredicted RBP7.44□□□□□ -1.22
SEC28YIL076W MCA1Q08601 432 aa7.44□□□□□ -1.22
SEC28YIL076W HAT1Q12341 374 aa7.44□□□□□ -1.22
SEC28YIL076W GRS1P38088 690 aaKnown RBP7.43□□□□□ -1.22
SEC28YIL076W GIP2P40036 548 aa7.43□□□□□ -1.22
SEC28YIL076W ACF4P47129 309 aa7.43□□□□□ -1.22
SEC28YIL076W BUD9P53226 547 aa7.43□□□□□ -1.22
SEC28YIL076W ALD3P54114 506 aa7.43□□□□□ -1.22
SEC28YIL076W UFD2P54860 961 aa7.43□□□□□ -1.22
SEC28YIL076W GAS5Q08193 484 aa7.43□□□□□ -1.22
SEC28YIL076W YBL113CQ7M4S9 792 aa7.43□□□□□ -1.22
SEC28YIL076W TRL1P09880 827 aaKnown RBP7.42□□□□□ -1.22
SEC28YIL076W FUS1P11710 512 aa7.42□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 79.9 ms