RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W NHA1Q99271 985 aa6.08□□□□□ -1.44
RPF1YHR088W RPC31P17890 251 aa6.07□□□□□ -1.44
RPF1YHR088W YCK2P23292 546 aaKnown RBP6.07□□□□□ -1.44
RPF1YHR088W TPS3P38426 1054 aaKnown RBP6.07□□□□□ -1.44
RPF1YHR088W CUS1Q02554 436 aaPredicted RBP6.07□□□□□ -1.44
RPF1YHR088W TAT1P38085 619 aa6.06□□□□□ -1.44
RPF1YHR088W DMA2P53924 522 aa6.06□□□□□ -1.44
RPF1YHR088W PRK1P40494 810 aa6.05□□□□□ -1.44
RPF1YHR088W ALG14P38242 237 aa6.04□□□□□ -1.44
RPF1YHR088W PUF6Q04373 656 aaKnown RBP6.04□□□□□ -1.44
RPF1YHR088W NAB2P32505 525 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
RPF1YHR088W DYS1P38791 387 aa6.03□□□□□ -1.44
RPF1YHR088W QDR2P40474 542 aa6.03□□□□□ -1.44
RPF1YHR088W ECM23Q02710 187 aa6.03□□□□□ -1.44
RPF1YHR088W PGM2P37012 569 aaKnown RBP6.02□□□□□ -1.45
RPF1YHR088W AMN1P38285 549 aaPredicted RBP6.02□□□□□ -1.45
RPF1YHR088W SLN1P39928 1220 aaPredicted RBP6.02□□□□□ -1.45
RPF1YHR088W LSB6P42951 607 aa6.02□□□□□ -1.45
RPF1YHR088W GIS4Q04233 774 aa6.02□□□□□ -1.45
RPF1YHR088W CAB1Q04430 367 aa6.02□□□□□ -1.45
RPF1YHR088W SLP1Q12232 587 aa6.02□□□□□ -1.45
RPF1YHR088W MRPL33P20084 86 aa6.01□□□□□ -1.45
RPF1YHR088W YER156CP40093 338 aaKnown RBP6.01□□□□□ -1.45
RPF1YHR088W NRD1P53617 575 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
RPF1YHR088W YOR296WQ08748 1289 aa6.01□□□□□ -1.45
RPF1YHR088W NAR1P23503 491 aaKnown RBP6□□□□□ -1.45
RPF1YHR088W UBX7P38349 436 aa6□□□□□ -1.45
RPF1YHR088W YBR287WP38355 427 aa6□□□□□ -1.45
RPF1YHR088W SUV3P32580 737 aa5.99□□□□□ -1.45
RPF1YHR088W LDH1P38139 375 aa5.99□□□□□ -1.45
RPF1YHR088W BUD9P53226 547 aa5.99□□□□□ -1.45
RPF1YHR088W YNR040WP53736 256 aa5.99□□□□□ -1.45
RPF1YHR088W YPL034WQ03083 165 aa5.99□□□□□ -1.45
RPF1YHR088W RSC2Q06488 889 aa5.99□□□□□ -1.45
RPF1YHR088W VMA3P25515 160 aa5.98□□□□□ -1.45
RPF1YHR088W GIP1P38229 639 aa5.98□□□□□ -1.45
RPF1YHR088W PRY1P47032 299 aa5.98□□□□□ -1.45
RPF1YHR088W AI3P03877 415 aa5.97□□□□□ -1.45
RPF1YHR088W IDI1P15496 288 aa5.97□□□□□ -1.45
RPF1YHR088W PUP1P25043 261 aa5.97□□□□□ -1.45
RPF1YHR088W CPS1P27614 576 aa5.97□□□□□ -1.45
RPF1YHR088W SFA1P32771 386 aa5.97□□□□□ -1.45
RPF1YHR088W YBR197CP38306 217 aa5.97□□□□□ -1.45
RPF1YHR088W ITC1P53125 1264 aa5.97□□□□□ -1.45
RPF1YHR088W SSA4P22202 642 aaKnown RBP5.96□□□□□ -1.46
RPF1YHR088W ISW1P38144 1129 aa5.96□□□□□ -1.46
RPF1YHR088W ALD4P46367 519 aaKnown RBP5.96□□□□□ -1.46
RPF1YHR088W MCA1Q08601 432 aa5.96□□□□□ -1.46
RPF1YHR088W SRS2P12954 1174 aa5.95□□□□□ -1.46
RPF1YHR088W FOX2Q02207 900 aaKnown RBP5.95□□□□□ -1.46
RPF1YHR088W SAC7P17121 654 aa5.94□□□□□ -1.46
RPF1YHR088W PUN1Q06991 263 aa5.94□□□□□ -1.46
RPF1YHR088W ARI1P53111 347 aaKnown RBP5.93□□□□□ -1.46
RPF1YHR088W ISC10P32645 267 aa5.92□□□□□ -1.46
RPF1YHR088W RRM3P38766 723 aa5.92□□□□□ -1.46
RPF1YHR088W LEM3P42838 414 aa5.91□□□□□ -1.46
RPF1YHR088W CWC15Q03772 175 aaKnown RBP5.91□□□□□ -1.46
RPF1YHR088W PGM1P33401 570 aaKnown RBP5.9□□□□□ -1.46
RPF1YHR088W BSD2P38356 321 aa5.9□□□□□ -1.46
RPF1YHR088W FIR1P40020 876 aa5.9□□□□□ -1.46
RPF1YHR088W YIL165CP40446 119 aa5.9□□□□□ -1.46
RPF1YHR088W TY4B-PA0A0B7P3V8 1104 aa5.89□□□□□ -1.47
RPF1YHR088W MSN1P22148 382 aa5.89□□□□□ -1.47
RPF1YHR088W RSC6P25632 483 aa5.89□□□□□ -1.47
RPF1YHR088W RRN6P32786 894 aa5.89□□□□□ -1.47
RPF1YHR088W DSE4P53753 1117 aa5.89□□□□□ -1.47
RPF1YHR088W TY4A-HQ6Q5P6 413 aa5.89□□□□□ -1.47
RPF1YHR088W MAC1P35192 417 aa5.88□□□□□ -1.47
RPF1YHR088W GIP2P40036 548 aa5.88□□□□□ -1.47
RPF1YHR088W GUP1P53154 560 aa5.88□□□□□ -1.47
RPF1YHR088W MRP10O75012 95 aa5.87□□□□□ -1.47
RPF1YHR088W HXT8P40886 569 aa5.87□□□□□ -1.47
RPF1YHR088W PPT1P53043 513 aa5.87□□□□□ -1.47
RPF1YHR088W COQ2P32378 372 aa5.86□□□□□ -1.47
RPF1YHR088W PNP1Q05788 311 aa5.85□□□□□ -1.47
RPF1YHR088W APC11Q12157 165 aa5.85□□□□□ -1.47
RPF1YHR088W AIM46P38885 310 aa5.84□□□□□ -1.47
RPF1YHR088W INP51P40559 946 aaKnown RBP5.84□□□□□ -1.47
RPF1YHR088W SOK2P53438 785 aaPredicted RBP5.84□□□□□ -1.47
RPF1YHR088W GAS5Q08193 484 aa5.84□□□□□ -1.47
RPF1YHR088W NOB1Q08444 459 aaKnown RBP5.84□□□□□ -1.47
RPF1YHR088W SOG2Q08817 791 aa5.84□□□□□ -1.47
RPF1YHR088W KAE1P36132 386 aa5.83□□□□□ -1.48
RPF1YHR088W OMA1P36163 345 aa5.83□□□□□ -1.48
RPF1YHR088W NTA1P40354 457 aa5.83□□□□□ -1.48
RPF1YHR088W TED1P40533 473 aa5.83□□□□□ -1.48
RPF1YHR088W INP52P50942 1183 aa5.83□□□□□ -1.48
RPF1YHR088W BIO5P53744 561 aaKnown RBP5.83□□□□□ -1.48
RPF1YHR088W EMG1Q06287 252 aaKnown RBP5.83□□□□□ -1.48
RPF1YHR088W TY1A-NL1Q12391 440 aaKnown RBP5.83□□□□□ -1.48
RPF1YHR088W LSO1Q3E827 93 aa5.83□□□□□ -1.48
RPF1YHR088W SMC1P32908 1225 aa5.82□□□□□ -1.48
RPF1YHR088W ALO1P54783 526 aaKnown RBP5.82□□□□□ -1.48
RPF1YHR088W FUS1P11710 512 aa5.81□□□□□ -1.48
RPF1YHR088W SAF1P38352 637 aa5.81□□□□□ -1.48
RPF1YHR088W YJL181WP46987 611 aa5.81□□□□□ -1.48
RPF1YHR088W YML083CQ04526 418 aa5.81□□□□□ -1.48
RPF1YHR088W MED7Q08278 222 aa5.81□□□□□ -1.48
RPF1YHR088W FUR4P05316 633 aaKnown RBP5.79□□□□□ -1.48
RPF1YHR088W RGD2P43556 714 aa5.79□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms