RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF6, Length 999 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF6	YHL025W	NUG1	P40010	520 aa	Known RBP	13.47	□□□□□ -0.25
SNF6	YHL025W	YNL193W	P53870	558 aa		13.47	□□□□□ -0.25
SNF6	YHL025W	PIF1	P07271	859 aa		13.46	□□□□□ -0.25
SNF6	YHL025W	MRPS35	P53292	345 aa		13.46	□□□□□ -0.25
SNF6	YHL025W	RPN7	Q06103	429 aa	Known RBP	13.46	□□□□□ -0.25
SNF6	YHL025W	DLD1	P32891	587 aa		13.45	□□□□□ -0.26
SNF6	YHL025W	RMD1	Q03441	430 aa		13.45	□□□□□ -0.26
SNF6	YHL025W	RRI2	Q12348	645 aa		13.44	□□□□□ -0.26
SNF6	YHL025W	KTR1	P27810	393 aa	Known RBP	13.43	□□□□□ -0.26
SNF6	YHL025W	ETP1	P38748	585 aa	Known RBP	13.43	□□□□□ -0.26
SNF6	YHL025W	EPS1	P40557	701 aa		13.43	□□□□□ -0.26
SNF6	YHL025W	DUS1	P53759	423 aa	Known RBP	13.43	□□□□□ -0.26
SNF6	YHL025W	KRE2	P27809	442 aa		13.42	□□□□□ -0.26
SNF6	YHL025W	OSH3	P38713	996 aa	Known RBP	13.42	□□□□□ -0.26
SNF6	YHL025W	VHR2	P40041	505 aa		13.42	□□□□□ -0.26
SNF6	YHL025W	UBX2	Q04228	584 aa		13.42	□□□□□ -0.26
SNF6	YHL025W	RIM20	Q12033	661 aa		13.42	□□□□□ -0.26
SNF6	YHL025W	GLO3	P38682	493 aa	Known RBP	13.41	□□□□□ -0.26
SNF6	YHL025W	SPL2	P38839	148 aa		13.41	□□□□□ -0.26
SNF6	YHL025W	HAL5	P38970	855 aa	Known RBP	13.41	□□□□□ -0.26
SNF6	YHL025W	FIG2	P25653	1609 aa		13.41	□□□□□ -0.26
SNF6	YHL025W	PBY1	P38254	753 aa		13.4	□□□□□ -0.26
SNF6	YHL025W	RPT4	P53549	437 aa	Known RBP	13.4	□□□□□ -0.26
SNF6	YHL025W	FPR4	Q06205	392 aa	Predicted RBP	13.4	□□□□□ -0.26
SNF6	YHL025W	MSM1	P22438	575 aa		13.39	□□□□□ -0.27
SNF6	YHL025W	AAP1	P37898	856 aa	Known RBP	13.39	□□□□□ -0.27
SNF6	YHL025W	HXT13	P39924	564 aa		13.39	□□□□□ -0.27
SNF6	YHL025W	PIB2	P53191	635 aa		13.39	□□□□□ -0.27
SNF6	YHL025W	DPL1	Q05567	589 aa		13.39	□□□□□ -0.27
SNF6	YHL025W	STM1	P39015	273 aa	Known RBP	13.38	□□□□□ -0.27
SNF6	YHL025W	FET4	P40988	552 aa		13.38	□□□□□ -0.27
SNF6	YHL025W	HXT17	P53631	564 aa		13.38	□□□□□ -0.27
SNF6	YHL025W	DUR1,2	P32528	1835 aa	Known RBP	13.38	□□□□□ -0.27
SNF6	YHL025W	GAP1	P19145	602 aa	Predicted RBP	13.37	□□□□□ -0.27
SNF6	YHL025W	GLC3	P32775	704 aa		13.37	□□□□□ -0.27
SNF6	YHL025W	PSF3	Q12146	194 aa		13.36	□□□□□ -0.27
SNF6	YHL025W	HKR1	P41809	1802 aa		13.36	□□□□□ -0.27
SNF6	YHL025W	OPY1	P38271	328 aa		13.35	□□□□□ -0.27
SNF6	YHL025W	YIL089W	P40500	205 aa		13.35	□□□□□ -0.27
SNF6	YHL025W	TIM50	Q02776	476 aa		13.35	□□□□□ -0.27
SNF6	YHL025W	IRC4	Q03036	179 aa		13.35	□□□□□ -0.27
SNF6	YHL025W	TPM1	P17536	199 aa	Known RBP	13.34	□□□□□ -0.27
SNF6	YHL025W	OPI1	P21957	404 aa		13.34	□□□□□ -0.27
SNF6	YHL025W	LCB1	P25045	558 aa	Known RBP	13.34	□□□□□ -0.27
SNF6	YHL025W	NPL4	P33755	580 aa		13.33	□□□□□ -0.28
SNF6	YHL025W	BBC1	P47068	1157 aa		13.33	□□□□□ -0.28
SNF6	YHL025W	CYB2	P00175	591 aa		13.32	□□□□□ -0.28
SNF6	YHL025W	GEF1	P37020	779 aa		13.32	□□□□□ -0.28
SNF6	YHL025W	ENP2	P48234	707 aa	Known RBP	13.32	□□□□□ -0.28
SNF6	YHL025W	INM2	Q05533	292 aa		13.32	□□□□□ -0.28
SNF6	YHL025W	YMR147W	P40218	223 aa	Known RBP	13.31	□□□□□ -0.28
SNF6	YHL025W	YIR042C	P40586	236 aa		13.31	□□□□□ -0.28
SNF6	YHL025W	AIM7	Q12156	149 aa		13.31	□□□□□ -0.28
SNF6	YHL025W	PEA2	P40091	420 aa		13.3	□□□□□ -0.28
SNF6	YHL025W	SET4	P42948	560 aa		13.3	□□□□□ -0.28
SNF6	YHL025W	PKH3	Q03306	898 aa	Predicted RBP	13.3	□□□□□ -0.28
SNF6	YHL025W	PCT1	P13259	424 aa		13.29	□□□□□ -0.28
SNF6	YHL025W	TIF4632	P39936	914 aa	Known RBP	13.29	□□□□□ -0.28
SNF6	YHL025W	YFH7	P43591	353 aa		13.29	□□□□□ -0.28
SNF6	YHL025W	JJJ2	P46997	583 aa		13.29	□□□□□ -0.28
SNF6	YHL025W	KAR5	Q04746	504 aa		13.29	□□□□□ -0.28
SNF6	YHL025W	RLF2	Q12495	606 aa		13.29	□□□□□ -0.28
SNF6	YHL025W	TRL1	P09880	827 aa	Known RBP	13.28	□□□□□ -0.28
SNF6	YHL025W	RNR2	P09938	399 aa	Known RBP	13.28	□□□□□ -0.28
SNF6	YHL025W	EMP47	P43555	445 aa		13.28	□□□□□ -0.28
SNF6	YHL025W	IRC8	P47046	822 aa		13.28	□□□□□ -0.28
SNF6	YHL025W	YGR117C	P53270	476 aa		13.28	□□□□□ -0.28
SNF6	YHL025W	TRM44	Q02648	567 aa	Known RBP	13.28	□□□□□ -0.28
SNF6	YHL025W	TAH18	Q12181	623 aa		13.28	□□□□□ -0.28
SNF6	YHL025W	LAM4	P38800	1345 aa		13.28	□□□□□ -0.28
SNF6	YHL025W	RPT3	P33298	428 aa	Known RBP	13.27	□□□□□ -0.29
SNF6	YHL025W	PTK1	P36002	662 aa	Predicted RBP	13.27	□□□□□ -0.29
SNF6	YHL025W	GRX7	P38068	203 aa		13.27	□□□□□ -0.29
SNF6	YHL025W	IOC3	P43596	787 aa		13.27	□□□□□ -0.29
SNF6	YHL025W	TYW1	Q08960	810 aa	Known RBP	13.27	□□□□□ -0.29
SNF6	YHL025W	WRS1	Q12109	432 aa	Known RBP	13.27	□□□□□ -0.29
SNF6	YHL025W	SPO22	P40511	975 aa		13.26	□□□□□ -0.29
SNF6	YHL025W	PRP42	Q03776	544 aa	Known RBP	13.26	□□□□□ -0.29
SNF6	YHL025W	TOS4	Q06266	489 aa		13.26	□□□□□ -0.29
SNF6	YHL025W	SRS2	P12954	1174 aa		13.25	□□□□□ -0.29
SNF6	YHL025W	MET1	P36150	593 aa		13.25	□□□□□ -0.29
SNF6	YHL025W	BOI1	P38041	980 aa	Known RBP	13.25	□□□□□ -0.29
SNF6	YHL025W	VPS4	P52917	437 aa		13.25	□□□□□ -0.29
SNF6	YHL025W	AIM9	P40053	627 aa	Known RBP	13.24	□□□□□ -0.29
SNF6	YHL025W	SSF2	Q12153	453 aa	Predicted RBP	13.24	□□□□□ -0.29
SNF6	YHL025W	ARG82	P07250	355 aa		13.23	□□□□□ -0.29
SNF6	YHL025W	IME2	P32581	645 aa		13.23	□□□□□ -0.29
SNF6	YHL025W	KRI1	P42846	591 aa	Known RBP	13.23	□□□□□ -0.29
SNF6	YHL025W	CWC15	Q03772	175 aa	Known RBP	13.23	□□□□□ -0.29
SNF6	YHL025W	GAS5	Q08193	484 aa		13.23	□□□□□ -0.29
SNF6	YHL025W	SNF3	P10870	884 aa		13.22	□□□□□ -0.29
SNF6	YHL025W	AFG2	P32794	780 aa		13.22	□□□□□ -0.29
SNF6	YHL025W	MDL2	P33311	773 aa		13.22	□□□□□ -0.29
SNF6	YHL025W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	13.22	□□□□□ -0.29	not detected
SNF6	YHL025W	GSM1	P42950	618 aa		13.22	□□□□□ -0.29
SNF6	YHL025W	CRF1	Q04930	467 aa		13.22	□□□□□ -0.29
SNF6	YHL025W	RRG1	Q12167	365 aa	Predicted RBP	13.22	□□□□□ -0.29
SNF6	YHL025W	HPR1	P17629	752 aa	Known RBP	13.21	□□□□□ -0.29
SNF6	YHL025W	STV1	P37296	890 aa		13.21	□□□□□ -0.29
SNF6	YHL025W	CIC1	P38779	376 aa	Known RBP	13.21	□□□□□ -0.29

Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms