RNA–Protein interactions for RNA: YGR280C

PXR1, Transcript of Essential protein involved in rRNA and snoRNA maturation, yeastyeast

Gene PXR1, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PXR1YGR280C LDH1P38139 375 aa6.01□□□□□ -1.45
PXR1YGR280C CRF1Q04930 467 aa6.01□□□□□ -1.45
PXR1YGR280C TRK1P12685 1235 aa6□□□□□ -1.45
PXR1YGR280C FRD1P32614 470 aaKnown RBP6□□□□□ -1.45
PXR1YGR280C FIR1P40020 876 aa6□□□□□ -1.45
PXR1YGR280C YFR016CP43597 1233 aaKnown RBP6□□□□□ -1.45
PXR1YGR280C RTF1P53064 558 aa6□□□□□ -1.45
PXR1YGR280C AHC1Q12433 566 aa6□□□□□ -1.45
PXR1YGR280C AFG2P32794 780 aa5.99□□□□□ -1.45
PXR1YGR280C WHI3P34761 661 aaKnown RBP5.99□□□□□ -1.45
PXR1YGR280C YGL082WP53155 381 aa5.99□□□□□ -1.45
PXR1YGR280C VPS62P53285 467 aa5.99□□□□□ -1.45
PXR1YGR280C MDG1P53885 366 aa5.99□□□□□ -1.45
PXR1YGR280C RMT2Q03305 412 aa5.99□□□□□ -1.45
PXR1YGR280C CBP1P07252 654 aa5.98□□□□□ -1.45
PXR1YGR280C SPR3P41901 512 aa5.98□□□□□ -1.45
PXR1YGR280C KIP3P53086 805 aaKnown RBP5.98□□□□□ -1.45
PXR1YGR280C YHR131CP38835 850 aa5.96□□□□□ -1.46
PXR1YGR280C RRG1Q12167 365 aaPredicted RBP5.96□□□□□ -1.46
PXR1YGR280C GSC2P40989 1895 aa5.96□□□□□ -1.46
PXR1YGR280C PDI1P17967 522 aaKnown RBP5.95□□□□□ -1.46
PXR1YGR280C UBP16Q02863 499 aa5.95□□□□□ -1.46
PXR1YGR280C NOP53Q12080 455 aaKnown RBP5.95□□□□□ -1.46
PXR1YGR280C LYS2P07702 1392 aa5.94□□□□□ -1.46
PXR1YGR280C YNR014WP53719 212 aa5.94□□□□□ -1.46
PXR1YGR280C NUP145P49687 1317 aa5.94□□□□□ -1.46
PXR1YGR280C YFL040WP43562 540 aa5.93□□□□□ -1.46
PXR1YGR280C PHM7Q12252 991 aa5.93□□□□□ -1.46
PXR1YGR280C YDR034W-BQ6Q5X2 51 aa5.93□□□□□ -1.46
PXR1YGR280C MID1P41821 548 aa5.92□□□□□ -1.46
PXR1YGR280C SYF1Q04048 859 aaPredicted RBP5.92□□□□□ -1.46
PXR1YGR280C YML082WQ04533 649 aaKnown RBP5.92□□□□□ -1.46
PXR1YGR280C SEC3P33332 1336 aaKnown RBP5.92□□□□□ -1.46
PXR1YGR280C UTP10P42945 1769 aaKnown RBP5.91□□□□□ -1.46
PXR1YGR280C CUP1-1P0CX80 61 aa5.91□□□□□ -1.46
PXR1YGR280C CUP1-2P0CX81 61 aa5.91□□□□□ -1.46
PXR1YGR280C ATG1P53104 897 aa5.91□□□□□ -1.46
PXR1YGR280C ECM30Q06673 1274 aa5.91□□□□□ -1.46
PXR1YGR280C MSC7P38694 644 aa5.9□□□□□ -1.46
PXR1YGR280C GAS5Q08193 484 aa5.9□□□□□ -1.46
PXR1YGR280C GAL2P13181 574 aa5.89□□□□□ -1.47
PXR1YGR280C YPL034WQ03083 165 aa5.89□□□□□ -1.47
PXR1YGR280C PEX29Q03370 554 aa5.89□□□□□ -1.47
PXR1YGR280C GSM1P42950 618 aa5.88□□□□□ -1.47
PXR1YGR280C BNI4P53858 892 aa5.88□□□□□ -1.47
PXR1YGR280C HAP5Q02516 242 aa5.88□□□□□ -1.47
PXR1YGR280C FAB1P34756 2278 aa5.88□□□□□ -1.47
PXR1YGR280C YML133CQ03099 1374 aa5.88□□□□□ -1.47
PXR1YGR280C HIP1P06775 603 aa5.87□□□□□ -1.47
PXR1YGR280C DMA1P38823 416 aa5.87□□□□□ -1.47
PXR1YGR280C ALE1Q08548 619 aa5.87□□□□□ -1.47
PXR1YGR280C HKR1P41809 1802 aa5.86□□□□□ -1.47
PXR1YGR280C PTC2P39966 464 aaKnown RBP5.86□□□□□ -1.47
PXR1YGR280C NIT1P40447 199 aa5.86□□□□□ -1.47
PXR1YGR280C GIN4Q12263 1142 aa5.86□□□□□ -1.47
PXR1YGR280C YOR131CQ12486 218 aa5.86□□□□□ -1.47
PXR1YGR280C GRX4P32642 244 aa5.85□□□□□ -1.47
PXR1YGR280C UIP5P36137 443 aa5.85□□□□□ -1.47
PXR1YGR280C ERG7P38604 731 aa5.85□□□□□ -1.47
PXR1YGR280C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
PXR1YGR280C FMP30Q02883 468 aa5.85□□□□□ -1.47
PXR1YGR280C SSP2Q08646 371 aa5.85□□□□□ -1.47
PXR1YGR280C HAT1Q12341 374 aa5.85□□□□□ -1.47
PXR1YGR280C ZDS2P54786 942 aa5.84□□□□□ -1.47
PXR1YGR280C CTF4Q01454 927 aa5.84□□□□□ -1.47
PXR1YGR280C FLO1P32768 1537 aa5.84□□□□□ -1.48
PXR1YGR280C IXR1P33417 597 aa5.83□□□□□ -1.48
PXR1YGR280C MAM3Q12296 706 aa5.83□□□□□ -1.48
PXR1YGR280C RAM2P29703 316 aa5.82□□□□□ -1.48
PXR1YGR280C UBX2Q04228 584 aa5.82□□□□□ -1.48
PXR1YGR280C FLO11P08640 1367 aa5.81□□□□□ -1.48
PXR1YGR280C PFK2P16862 959 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
PXR1YGR280C AMS1P22855 1083 aa5.81□□□□□ -1.48
PXR1YGR280C DSF2P38213 736 aa5.81□□□□□ -1.48
PXR1YGR280C VID30P53076 958 aa5.81□□□□□ -1.48
PXR1YGR280C DSD1P53095 428 aa5.81□□□□□ -1.48
PXR1YGR280C HIM1Q06674 414 aa5.81□□□□□ -1.48
PXR1YGR280C AUS1Q08409 1394 aa5.8□□□□□ -1.48
PXR1YGR280C KCC4P25389 1037 aa5.8□□□□□ -1.48
PXR1YGR280C KRE2P27809 442 aa5.8□□□□□ -1.48
PXR1YGR280C AOS1Q06624 347 aa5.8□□□□□ -1.48
PXR1YGR280C SSK22P25390 1331 aaPredicted RBP5.79□□□□□ -1.48
PXR1YGR280C SCT1P32784 759 aa5.79□□□□□ -1.48
PXR1YGR280C YJL007CP47080 104 aa5.79□□□□□ -1.48
PXR1YGR280C ORC1P54784 914 aaPredicted RBP5.79□□□□□ -1.48
PXR1YGR280C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
PXR1YGR280C PRP42Q03776 544 aaKnown RBP5.79□□□□□ -1.48
PXR1YGR280C ICL2Q12031 575 aa5.79□□□□□ -1.48
PXR1YGR280C TY3A-GQ12173 290 aa5.79□□□□□ -1.48
PXR1YGR280C TY3A-IQ99219 290 aa5.79□□□□□ -1.48
PXR1YGR280C TEL1P38110 2787 aa5.79□□□□□ -1.48
PXR1YGR280C ARG8P18544 423 aa5.78□□□□□ -1.48
PXR1YGR280C UTP7P40055 554 aaKnown RBP5.78□□□□□ -1.48
PXR1YGR280C MTC3P53077 123 aa5.78□□□□□ -1.48
PXR1YGR280C CDC60P26637 1090 aaKnown RBP5.77□□□□□ -1.49
PXR1YGR280C IRE1P32361 1115 aa5.77□□□□□ -1.49
PXR1YGR280C TPS3P38426 1054 aaKnown RBP5.77□□□□□ -1.49
PXR1YGR280C NET1P47035 1189 aa5.77□□□□□ -1.49
PXR1YGR280C TAP42Q04372 366 aa5.77□□□□□ -1.49
PXR1YGR280C DAP1Q12091 152 aa5.77□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms