RNA–Protein interactions for RNA: YGR217W

CCH1, Transcript of Voltage-gated high-affinity calcium channel, yeastyeast

Gene CCH1, Length 6,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCH1YGR217W MDM1Q01846 1127 aa1.88□□□□□ -2.11
CCH1YGR217W SQS1P53866 767 aaKnown RBP1.88□□□□□ -2.11
CCH1YGR217W THS1P04801 734 aaKnown RBP1.87□□□□□ -2.11
CCH1YGR217W FBP1P09201 348 aa1.87□□□□□ -2.11
CCH1YGR217W NAP1P25293 417 aaKnown RBP1.87□□□□□ -2.11
CCH1YGR217W YPR204WQ08995 1032 aa1.87□□□□□ -2.11
CCH1YGR217W SPE3Q12074 293 aaKnown RBP1.87□□□□□ -2.11
CCH1YGR217W DYN1P36022 4092 aa1.87□□□□□ -2.11
CCH1YGR217W GAP1P19145 602 aaPredicted RBP1.87□□□□□ -2.11
CCH1YGR217W KRE2P27809 442 aa1.87□□□□□ -2.11
CCH1YGR217W IRA2P19158 3079 aa1.87□□□□□ -2.11
CCH1YGR217W MAP1Q01662 387 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
CCH1YGR217W KSP1P38691 1029 aaKnown RBP1.86□□□□□ -2.11
CCH1YGR217W LSB6P42951 607 aa1.86□□□□□ -2.11
CCH1YGR217W PSF3Q12146 194 aa1.86□□□□□ -2.11
CCH1YGR217W LEU3P08638 886 aa1.86□□□□□ -2.11
CCH1YGR217W PER1P25625 357 aa1.86□□□□□ -2.11
CCH1YGR217W ZDS2P54786 942 aa1.86□□□□□ -2.11
CCH1YGR217W LSB3P43603 459 aaKnown RBP1.86□□□□□ -2.11
CCH1YGR217W VPS62P53285 467 aa1.86□□□□□ -2.11
CCH1YGR217W YLR271WQ06152 274 aa1.86□□□□□ -2.11
CCH1YGR217W NAB3P38996 802 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
CCH1YGR217W HAT1Q12341 374 aa1.85□□□□□ -2.11
CCH1YGR217W CCH1P50077 2039 aa1.85□□□□□ -2.11
CCH1YGR217W MSM1P22438 575 aa1.85□□□□□ -2.11
CCH1YGR217W SFB3P38810 929 aa1.85□□□□□ -2.11
CCH1YGR217W YAP1801P38856 637 aa1.85□□□□□ -2.11
CCH1YGR217W BDF2Q07442 638 aa1.85□□□□□ -2.11
CCH1YGR217W SYN8P31377 255 aa1.85□□□□□ -2.11
CCH1YGR217W RCM1P53972 490 aa1.85□□□□□ -2.11
CCH1YGR217W PHR1P05066 565 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
CCH1YGR217W EBP2P36049 427 aaKnown RBP1.84□□□□□ -2.11
CCH1YGR217W YJL007CP47080 104 aa1.84□□□□□ -2.11
CCH1YGR217W PRI2P20457 528 aa1.84□□□□□ -2.11
CCH1YGR217W SET4P42948 560 aa1.84□□□□□ -2.11
CCH1YGR217W BCS1P32839 456 aa1.84□□□□□ -2.12
CCH1YGR217W ASH1P34233 588 aa1.84□□□□□ -2.12
CCH1YGR217W RIM4P38741 713 aa1.84□□□□□ -2.12
CCH1YGR217W ACK1Q07622 623 aaPredicted RBP1.84□□□□□ -2.12
CCH1YGR217W SNF3P10870 884 aa1.83□□□□□ -2.12
CCH1YGR217W PUF4P25339 888 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
CCH1YGR217W IXR1P33417 597 aa1.83□□□□□ -2.12
CCH1YGR217W TAF5P38129 798 aa1.83□□□□□ -2.12
CCH1YGR217W TIF4631P39935 952 aaKnown RBP1.83□□□□□ -2.12
CCH1YGR217W TFC8Q12308 588 aa1.83□□□□□ -2.12
CCH1YGR217W ISF1P32488 338 aa1.83□□□□□ -2.12
CCH1YGR217W MSH4P40965 878 aaPredicted RBP1.83□□□□□ -2.12
CCH1YGR217W MTC5Q03897 1148 aa1.83□□□□□ -2.12
CCH1YGR217W BRR2P32639 2163 aaKnown RBP1.83□□□□□ -2.12
CCH1YGR217W MYO1P08964 1928 aa1.82□□□□□ -2.12
CCH1YGR217W CLC1P17891 233 aa1.82□□□□□ -2.12
CCH1YGR217W AIM44Q99299 758 aa1.82□□□□□ -2.12
CCH1YGR217W AFG2P32794 780 aa1.82□□□□□ -2.12
CCH1YGR217W ICP55P40051 511 aa1.82□□□□□ -2.12
CCH1YGR217W COG8Q04632 607 aa1.82□□□□□ -2.12
CCH1YGR217W CDC45Q08032 650 aa1.82□□□□□ -2.12
CCH1YGR217W LDH1P38139 375 aa1.82□□□□□ -2.12
CCH1YGR217W TIF1P10081 395 aaKnown RBP1.82□□□□□ -2.12
CCH1YGR217W RIX1P38883 763 aaPredicted RBP1.82□□□□□ -2.12
CCH1YGR217W YPR148CQ06523 435 aa1.82□□□□□ -2.12
CCH1YGR217W PEP7P32609 515 aa1.81□□□□□ -2.12
CCH1YGR217W PRS1P32895 427 aaKnown RBP1.81□□□□□ -2.12
CCH1YGR217W SSP2Q08646 371 aa1.81□□□□□ -2.12
CCH1YGR217W PAH1P32567 862 aa1.81□□□□□ -2.12
CCH1YGR217W SPL2P38839 148 aa1.81□□□□□ -2.12
CCH1YGR217W PES4P39684 611 aa1.81□□□□□ -2.12
CCH1YGR217W HUL4P40985 892 aa1.81□□□□□ -2.12
CCH1YGR217W IRC3Q06683 689 aa1.81□□□□□ -2.12
CCH1YGR217W RPC31P17890 251 aa1.81□□□□□ -2.12
CCH1YGR217W GPB2P39717 880 aa1.81□□□□□ -2.12
CCH1YGR217W VPS27P40343 622 aaKnown RBP1.81□□□□□ -2.12
CCH1YGR217W HGH1P48362 394 aaKnown RBP1.81□□□□□ -2.12
CCH1YGR217W GAL2P13181 574 aa1.81□□□□□ -2.12
CCH1YGR217W KIN1P13185 1064 aa1.81□□□□□ -2.12
CCH1YGR217W NUG1P40010 520 aaKnown RBP1.81□□□□□ -2.12
CCH1YGR217W TCB2P48231 1178 aa1.81□□□□□ -2.12
CCH1YGR217W PDS5Q04264 1277 aa1.81□□□□□ -2.12
CCH1YGR217W YDR306CQ06640 478 aa1.81□□□□□ -2.12
CCH1YGR217W SLI15P38283 698 aa1.8□□□□□ -2.12
CCH1YGR217W ESC2Q06340 456 aa1.8□□□□□ -2.12
CCH1YGR217W PIN2Q12057 282 aa1.8□□□□□ -2.12
CCH1YGR217W FOL2P51601 243 aaKnown RBP1.8□□□□□ -2.12
CCH1YGR217W TAF8Q03750 510 aa1.8□□□□□ -2.12
CCH1YGR217W RIP1P08067 215 aa1.8□□□□□ -2.12
CCH1YGR217W ARP8Q12386 881 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
CCH1YGR217W RAD2P07276 1031 aa1.8□□□□□ -2.12
CCH1YGR217W BUD27P43573 796 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
CCH1YGR217W GUD1Q07729 489 aa1.8□□□□□ -2.12
CCH1YGR217W LAA1P39526 2014 aa1.8□□□□□ -2.12
CCH1YGR217W LPD1P09624 499 aaKnown RBP1.79□□□□□ -2.12
CCH1YGR217W MRF1P30775 413 aaPredicted RBP1.79□□□□□ -2.12
CCH1YGR217W RGT1P32862 1170 aa1.79□□□□□ -2.12
CCH1YGR217W UGA3P26370 528 aa1.79□□□□□ -2.12
CCH1YGR217W DRE2P36152 348 aa1.79□□□□□ -2.12
CCH1YGR217W YNR061CP53747 219 aa1.79□□□□□ -2.12
CCH1YGR217W NAB6Q03735 1134 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
CCH1YGR217W BEM2P39960 2167 aaKnown RBP1.79□□□□□ -2.12
CCH1YGR217W SPE2P21182 396 aa1.79□□□□□ -2.12
CCH1YGR217W PKC1P24583 1151 aa1.79□□□□□ -2.12
CCH1YGR217W VPS24P36095 224 aaKnown RBP1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 56.5 ms