RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W ACS2P52910 683 aaKnown RBP6.55□□□□□ -1.36
PTI1YGR156W UTP4Q06679 776 aaKnown RBP6.54□□□□□ -1.36
PTI1YGR156W GAS4Q08271 471 aa6.54□□□□□ -1.36
PTI1YGR156W SCD5P34758 872 aa6.53□□□□□ -1.36
PTI1YGR156W OMA1P36163 345 aa6.53□□□□□ -1.36
PTI1YGR156W NCL1P38205 684 aaKnown RBP6.53□□□□□ -1.36
PTI1YGR156W PRK1P40494 810 aa6.52□□□□□ -1.37
PTI1YGR156W BUD9P53226 547 aa6.52□□□□□ -1.37
PTI1YGR156W KAP122P32767 1081 aa6.51□□□□□ -1.37
PTI1YGR156W UBP1P25037 809 aa6.5□□□□□ -1.37
PTI1YGR156W NAR1P23503 491 aaKnown RBP6.49□□□□□ -1.37
PTI1YGR156W NGR1P32831 672 aaKnown RBP6.49□□□□□ -1.37
PTI1YGR156W SKP1P52286 194 aa6.49□□□□□ -1.37
PTI1YGR156W GAS5Q08193 484 aa6.49□□□□□ -1.37
PTI1YGR156W GAL2P13181 574 aa6.48□□□□□ -1.37
PTI1YGR156W VAN1P23642 535 aa6.48□□□□□ -1.37
PTI1YGR156W NAB2P32505 525 aaKnown RBP RIP-Chip data6.48□□□□□ -1.37not detected
PTI1YGR156W CWH41P53008 833 aa6.48□□□□□ -1.37
PTI1YGR156W APM2P38700 605 aa6.47□□□□□ -1.37
PTI1YGR156W INP52P50942 1183 aa6.47□□□□□ -1.37
PTI1YGR156W CUS1Q02554 436 aaPredicted RBP6.47□□□□□ -1.37
PTI1YGR156W GIS4Q04233 774 aa6.46□□□□□ -1.38
PTI1YGR156W RRM3P38766 723 aa6.45□□□□□ -1.38
PTI1YGR156W ROM1P53046 1155 aa6.45□□□□□ -1.38
PTI1YGR156W HXT5P38695 592 aa6.44□□□□□ -1.38
PTI1YGR156W AI3P03877 415 aa6.43□□□□□ -1.38
PTI1YGR156W TRS33Q99394 268 aa6.43□□□□□ -1.38
PTI1YGR156W YNR040WP53736 256 aa6.42□□□□□ -1.38
PTI1YGR156W SAC7P17121 654 aa6.41□□□□□ -1.38
PTI1YGR156W TGL4P36165 910 aa6.41□□□□□ -1.38
PTI1YGR156W QDR2P40474 542 aa6.41□□□□□ -1.38
PTI1YGR156W ECM23Q02710 187 aa6.41□□□□□ -1.38
PTI1YGR156W RPC31P17890 251 aa6.4□□□□□ -1.38
PTI1YGR156W MRP10O75012 95 aa6.38□□□□□ -1.39
PTI1YGR156W COQ2P32378 372 aa6.38□□□□□ -1.39
PTI1YGR156W PGM1P33401 570 aaKnown RBP6.37□□□□□ -1.39
PTI1YGR156W TTI1P36097 1038 aa6.37□□□□□ -1.39
PTI1YGR156W ARI1P53111 347 aaKnown RBP6.37□□□□□ -1.39
PTI1YGR156W UBX7P38349 436 aa6.36□□□□□ -1.39
PTI1YGR156W DYS1P38791 387 aa6.36□□□□□ -1.39
PTI1YGR156W AVT1P47082 602 aa6.36□□□□□ -1.39
PTI1YGR156W SLP1Q12232 587 aa6.35□□□□□ -1.39
PTI1YGR156W TRP3P00937 484 aa6.34□□□□□ -1.39
PTI1YGR156W IDI1P15496 288 aa6.34□□□□□ -1.39
PTI1YGR156W MRPL33P20084 86 aa6.34□□□□□ -1.39
PTI1YGR156W VMA3P25515 160 aa6.34□□□□□ -1.39
PTI1YGR156W LDH1P38139 375 aa6.34□□□□□ -1.39
PTI1YGR156W FOX2Q02207 900 aaKnown RBP6.34□□□□□ -1.39
PTI1YGR156W CAB1Q04430 367 aa6.34□□□□□ -1.39
PTI1YGR156W YOR296WQ08748 1289 aa6.34□□□□□ -1.39
PTI1YGR156W SFA1P32771 386 aa6.33□□□□□ -1.4
PTI1YGR156W LIP5P32875 414 aa6.33□□□□□ -1.4
PTI1YGR156W KAE1P36132 386 aa6.33□□□□□ -1.4
PTI1YGR156W YKR073CP36153 106 aa6.33□□□□□ -1.4
PTI1YGR156W YER156CP40093 338 aaKnown RBP6.33□□□□□ -1.4
PTI1YGR156W MED7Q08278 222 aa6.33□□□□□ -1.4
PTI1YGR156W GIP1P38229 639 aa6.32□□□□□ -1.4
PTI1YGR156W YBR287WP38355 427 aa6.32□□□□□ -1.4
PTI1YGR156W ITC1P53125 1264 aa6.32□□□□□ -1.4
PTI1YGR156W DMA2P53924 522 aa6.32□□□□□ -1.4
PTI1YGR156W RSC2Q06488 889 aa6.32□□□□□ -1.4
PTI1YGR156W SUV3P32580 737 aa6.31□□□□□ -1.4
PTI1YGR156W YBR197CP38306 217 aa6.31□□□□□ -1.4
PTI1YGR156W RSC6P25632 483 aa6.3□□□□□ -1.4
PTI1YGR156W ISW1P38144 1129 aa6.3□□□□□ -1.4
PTI1YGR156W TED1P40533 473 aa6.3□□□□□ -1.4
PTI1YGR156W PUF6Q04373 656 aaKnown RBP6.3□□□□□ -1.4
PTI1YGR156W YLR122CQ12312 125 aa6.3□□□□□ -1.4
PTI1YGR156W TY4B-PA0A0B7P3V8 1104 aa6.29□□□□□ -1.4
PTI1YGR156W TOS1P38288 455 aa6.29□□□□□ -1.4
PTI1YGR156W GIP2P40036 548 aa6.29□□□□□ -1.4
PTI1YGR156W PUN1Q06991 263 aa6.29□□□□□ -1.4
PTI1YGR156W TY4A-HQ6Q5P6 413 aa6.29□□□□□ -1.4
PTI1YGR156W CPS1P27614 576 aa6.28□□□□□ -1.4
PTI1YGR156W FIR1P40020 876 aa6.27□□□□□ -1.41
PTI1YGR156W ALD4P46367 519 aaKnown RBP6.27□□□□□ -1.41
PTI1YGR156W YGR130CP53278 816 aa6.27□□□□□ -1.41
PTI1YGR156W DSE4P53753 1117 aa6.27□□□□□ -1.41
PTI1YGR156W ISC10P32645 267 aa6.26□□□□□ -1.41
PTI1YGR156W BSD2P38356 321 aa6.26□□□□□ -1.41
PTI1YGR156W AKR1P39010 764 aa6.26□□□□□ -1.41
PTI1YGR156W SOK2P53438 785 aaPredicted RBP6.26□□□□□ -1.41
PTI1YGR156W CHS2P14180 963 aa6.25□□□□□ -1.41
PTI1YGR156W YJL181WP46987 611 aa6.25□□□□□ -1.41
PTI1YGR156W PUP1P25043 261 aa6.24□□□□□ -1.41
PTI1YGR156W NAM7P30771 971 aaKnown RBP6.24□□□□□ -1.41
PTI1YGR156W SAF1P38352 637 aa6.24□□□□□ -1.41
PTI1YGR156W YIL165CP40446 119 aa6.24□□□□□ -1.41
PTI1YGR156W TY1A-NL1Q12391 440 aaKnown RBP6.24□□□□□ -1.41
PTI1YGR156W SRS2P12954 1174 aa6.23□□□□□ -1.41
PTI1YGR156W PPT1P53043 513 aa6.23□□□□□ -1.41
PTI1YGR156W MSN1P22148 382 aa6.22□□□□□ -1.41
PTI1YGR156W CTH1P47976 325 aa6.22□□□□□ -1.41
PTI1YGR156W PUB1P32588 453 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42 RIP-Chip
PTI1YGR156W LEM3P42838 414 aa6.21□□□□□ -1.42
PTI1YGR156W BRE4Q07660 1125 aa6.21□□□□□ -1.42
PTI1YGR156W SSA4P22202 642 aaKnown RBP6.2□□□□□ -1.42
PTI1YGR156W INP51P40559 946 aaKnown RBP6.2□□□□□ -1.42
PTI1YGR156W GUP1P53154 560 aa6.2□□□□□ -1.42
PTI1YGR156W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
Retrieved 100 of 5,963 RNA–protein pairs in 51.3 ms