RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W YFL066CP43538 392 aa5.64□□□□□ -1.51
LOC1YFR001W PHM7Q12252 991 aa5.64□□□□□ -1.51
LOC1YFR001W HAT1Q12341 374 aa5.64□□□□□ -1.51
LOC1YFR001W VMA3P25515 160 aa5.63□□□□□ -1.51
LOC1YFR001W KAP122P32767 1081 aa5.63□□□□□ -1.51
LOC1YFR001W ADE12P80210 433 aaKnown RBP5.63□□□□□ -1.51
LOC1YFR001W AI1P03875 834 aa5.62□□□□□ -1.51
LOC1YFR001W MRPL16P38064 232 aa5.62□□□□□ -1.51
LOC1YFR001W MTO1P53070 669 aa5.62□□□□□ -1.51
LOC1YFR001W RGP1P16664 663 aa5.61□□□□□ -1.51
LOC1YFR001W QDR2P40474 542 aa5.61□□□□□ -1.51
LOC1YFR001W APC11Q12157 165 aa5.61□□□□□ -1.51
LOC1YFR001W TRL1P09880 827 aaKnown RBP5.6□□□□□ -1.51
LOC1YFR001W ATG1P53104 897 aa5.6□□□□□ -1.51
LOC1YFR001W NSG2P53898 299 aa5.6□□□□□ -1.51
LOC1YFR001W THI72Q08579 599 aa5.6□□□□□ -1.51
LOC1YFR001W STB3Q12427 513 aa5.6□□□□□ -1.51
LOC1YFR001W RPC31P17890 251 aa5.59□□□□□ -1.51
LOC1YFR001W LDH1P38139 375 aa5.59□□□□□ -1.51
LOC1YFR001W GLO3P38682 493 aaKnown RBP5.59□□□□□ -1.51
LOC1YFR001W DYS1P38791 387 aa5.59□□□□□ -1.51
LOC1YFR001W ERP5P38819 212 aa5.59□□□□□ -1.51
LOC1YFR001W SPR3P41901 512 aa5.59□□□□□ -1.51
LOC1YFR001W SKP1P52286 194 aa5.59□□□□□ -1.51
LOC1YFR001W YBL113CQ7M4S9 792 aa5.59□□□□□ -1.51
LOC1YFR001W SSF1P38789 453 aaPredicted RBP5.58□□□□□ -1.52
LOC1YFR001W QDR1P40475 563 aa5.58□□□□□ -1.52
LOC1YFR001W RPB10P22139 70 aa5.57□□□□□ -1.52
LOC1YFR001W KTR2P33550 425 aa5.57□□□□□ -1.52
LOC1YFR001W ACF4P47129 309 aa5.57□□□□□ -1.52
LOC1YFR001W CUS1Q02554 436 aaPredicted RBP5.57□□□□□ -1.52
LOC1YFR001W FPS1P23900 669 aa5.56□□□□□ -1.52
LOC1YFR001W NAB2P32505 525 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52 RIP-Chip
LOC1YFR001W GRS1P38088 690 aaKnown RBP5.56□□□□□ -1.52
LOC1YFR001W HXT8P40886 569 aa5.56□□□□□ -1.52
LOC1YFR001W MDJ2P42834 146 aa5.56□□□□□ -1.52
LOC1YFR001W SUT1P53032 299 aaKnown RBP5.56□□□□□ -1.52
LOC1YFR001W GPM1P00950 247 aaKnown RBP5.55□□□□□ -1.52
LOC1YFR001W RPP1AP05318 106 aaPredicted RBP5.55□□□□□ -1.52
LOC1YFR001W MSN1P22148 382 aa5.55□□□□□ -1.52
LOC1YFR001W SBE2P42223 864 aaKnown RBP5.55□□□□□ -1.52
LOC1YFR001W YML020WQ03722 664 aa5.55□□□□□ -1.52
LOC1YFR001W YOR296WQ08748 1289 aa5.55□□□□□ -1.52
LOC1YFR001W GIP1P38229 639 aa5.54□□□□□ -1.52
LOC1YFR001W BSD2P38356 321 aa5.54□□□□□ -1.52
LOC1YFR001W APM2P38700 605 aa5.54□□□□□ -1.52
LOC1YFR001W YNR040WP53736 256 aa5.54□□□□□ -1.52
LOC1YFR001W ISW1P38144 1129 aa5.53□□□□□ -1.52
LOC1YFR001W TY1A-DR2Q03964 440 aaKnown RBP5.53□□□□□ -1.52
LOC1YFR001W SMC1P32908 1225 aa5.52□□□□□ -1.53
LOC1YFR001W NCL1P38205 684 aaKnown RBP5.52□□□□□ -1.53
LOC1YFR001W MSC7P38694 644 aa5.52□□□□□ -1.53
LOC1YFR001W FIR1P40020 876 aa5.52□□□□□ -1.53
LOC1YFR001W ITC1P53125 1264 aa5.52□□□□□ -1.53
LOC1YFR001W NTA1P40354 457 aa5.51□□□□□ -1.53
LOC1YFR001W RGD2P43556 714 aa5.51□□□□□ -1.53
LOC1YFR001W UFD2P54860 961 aa5.51□□□□□ -1.53
LOC1YFR001W HEH2Q03281 663 aa5.51□□□□□ -1.53
LOC1YFR001W TDA6Q06466 467 aa5.51□□□□□ -1.53
LOC1YFR001W NOP8Q08287 484 aaPredicted RBP5.51□□□□□ -1.53
LOC1YFR001W PDC5P16467 563 aaKnown RBP5.5□□□□□ -1.53
LOC1YFR001W KNS1P32350 737 aaPredicted RBP5.5□□□□□ -1.53
LOC1YFR001W YBR287WP38355 427 aa5.5□□□□□ -1.53
LOC1YFR001W RAD55P38953 406 aa5.5□□□□□ -1.53
LOC1YFR001W STM1P39015 273 aaKnown RBP5.5□□□□□ -1.53
LOC1YFR001W CCT8P47079 568 aaKnown RBP5.5□□□□□ -1.53
LOC1YFR001W TRS120Q04183 1289 aa5.5□□□□□ -1.53
LOC1YFR001W NUT2Q06213 157 aa5.5□□□□□ -1.53
LOC1YFR001W YPR053CQ6Q5F3 151 aa5.5□□□□□ -1.53
LOC1YFR001W FRT1Q99332 602 aa5.5□□□□□ -1.53
LOC1YFR001W MCX1P38323 520 aaPredicted RBP5.49□□□□□ -1.53
LOC1YFR001W YHL050CP38721 697 aa5.49□□□□□ -1.53
LOC1YFR001W SKN7P38889 622 aa5.49□□□□□ -1.53
LOC1YFR001W YHR219WP38900 624 aa5.49□□□□□ -1.53
LOC1YFR001W YIL165CP40446 119 aa5.49□□□□□ -1.53
LOC1YFR001W EMG1Q06287 252 aaKnown RBP5.49□□□□□ -1.53
LOC1YFR001W MNL2Q12205 849 aa5.49□□□□□ -1.53
LOC1YFR001W SLD2P34252 453 aa5.48□□□□□ -1.53
LOC1YFR001W IRS4P36115 615 aaKnown RBP5.48□□□□□ -1.53
LOC1YFR001W YNR014WP53719 212 aa5.48□□□□□ -1.53
LOC1YFR001W SEN54Q02825 467 aaPredicted RBP5.48□□□□□ -1.53
LOC1YFR001W MSC6Q08818 692 aaKnown RBP5.48□□□□□ -1.53
LOC1YFR001W TIF6Q12522 245 aaKnown RBP5.48□□□□□ -1.53
LOC1YFR001W YER156CP40093 338 aaKnown RBP5.47□□□□□ -1.53
LOC1YFR001W PSY2P40164 858 aa5.47□□□□□ -1.53
LOC1YFR001W PRK1P40494 810 aa5.47□□□□□ -1.53
LOC1YFR001W YMR187CQ03236 431 aa5.47□□□□□ -1.53
LOC1YFR001W IDI1P15496 288 aa5.46□□□□□ -1.54
LOC1YFR001W AIM46P38885 310 aa5.46□□□□□ -1.54
LOC1YFR001W BOI2P39969 1040 aa5.46□□□□□ -1.54
LOC1YFR001W YNL011CP53980 444 aa5.46□□□□□ -1.54
LOC1YFR001W RSC4Q02206 625 aa5.46□□□□□ -1.54
LOC1YFR001W GPI13Q07830 1017 aa5.46□□□□□ -1.54
LOC1YFR001W YCK2P23292 546 aaKnown RBP5.44□□□□□ -1.54
LOC1YFR001W SEC20P28791 383 aa5.44□□□□□ -1.54
LOC1YFR001W MET1P36150 593 aa5.44□□□□□ -1.54
LOC1YFR001W PPX1P38698 397 aa5.44□□□□□ -1.54
LOC1YFR001W IPL1P38991 367 aa5.44□□□□□ -1.54
LOC1YFR001W PPT1P53043 513 aa5.43□□□□□ -1.54
LOC1YFR001W CDC55Q00362 526 aa5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms