RNA–Protein interactions for RNA: YEL047C

FRD1, Transcript of Soluble fumarate reductase, yeast

Gene FRD1, Length 1,413 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRD1	YEL047C	RRI2	Q12348	645 aa		13.83	□□□□□ -0.2
FRD1	YEL047C	HAL5	P38970	855 aa	Known RBP	13.82	□□□□□ -0.2
FRD1	YEL047C	YIR042C	P40586	236 aa		13.82	□□□□□ -0.2
FRD1	YEL047C	YGL242C	P53066	181 aa		13.82	□□□□□ -0.2
FRD1	YEL047C	NOT3	P06102	836 aa	Known RBP	13.81	□□□□□ -0.2
FRD1	YEL047C	TRM44	Q02648	567 aa	Known RBP	13.81	□□□□□ -0.2
FRD1	YEL047C	PRP42	Q03776	544 aa	Known RBP	13.81	□□□□□ -0.2
FRD1	YEL047C	PUS5	Q06244	254 aa		13.81	□□□□□ -0.2
FRD1	YEL047C	YLR278C	Q05854	1341 aa		13.81	□□□□□ -0.2
FRD1	YEL047C	STV1	P37296	890 aa		13.81	□□□□□ -0.2
FRD1	YEL047C	VPS4	P52917	437 aa		13.81	□□□□□ -0.2
FRD1	YEL047C	RFC1	P38630	861 aa	Known RBP	13.8	□□□□□ -0.2
FRD1	YEL047C	FET4	P40988	552 aa		13.8	□□□□□ -0.2
FRD1	YEL047C	ALO1	P54783	526 aa	Known RBP	13.8	□□□□□ -0.2
FRD1	YEL047C	PDR18	P53756	1333 aa		13.79	□□□□□ -0.2
FRD1	YEL047C	ECM21	P38167	1117 aa	Known RBP	13.79	□□□□□ -0.2
FRD1	YEL047C	JJJ2	P46997	583 aa		13.79	□□□□□ -0.2
FRD1	YEL047C	INM2	Q05533	292 aa		13.79	□□□□□ -0.2
FRD1	YEL047C	WRS1	Q12109	432 aa	Known RBP	13.79	□□□□□ -0.2
FRD1	YEL047C	ARG82	P07250	355 aa		13.78	□□□□□ -0.2
FRD1	YEL047C	MLC1	P53141	149 aa		13.78	□□□□□ -0.2
FRD1	YEL047C	RMD1	Q03441	430 aa		13.78	□□□□□ -0.2
FRD1	YEL047C	NKP2	Q06162	153 aa		13.78	□□□□□ -0.2
FRD1	YEL047C	RPS7A	P26786	190 aa	Known RBP	13.77	□□□□□ -0.21
FRD1	YEL047C	RTG2	P32608	588 aa	Known RBP	13.77	□□□□□ -0.21
FRD1	YEL047C	GLC3	P32775	704 aa		13.77	□□□□□ -0.21
FRD1	YEL047C	YFH7	P43591	353 aa		13.77	□□□□□ -0.21
FRD1	YEL047C	PIF1	P07271	859 aa		13.75	□□□□□ -0.21
FRD1	YEL047C	SSA4	P22202	642 aa	Known RBP	13.75	□□□□□ -0.21
FRD1	YEL047C	TIM50	Q02776	476 aa		13.75	□□□□□ -0.21
FRD1	YEL047C	AIM7	Q12156	149 aa		13.75	□□□□□ -0.21
FRD1	YEL047C	CDC16	P09798	840 aa		13.74	□□□□□ -0.21
FRD1	YEL047C	PTK1	P36002	662 aa	Predicted RBP	13.74	□□□□□ -0.21
FRD1	YEL047C	EPS1	P40557	701 aa		13.74	□□□□□ -0.21
FRD1	YEL047C	PIB2	P53191	635 aa		13.74	□□□□□ -0.21
FRD1	YEL047C	CRF1	Q04930	467 aa		13.74	□□□□□ -0.21
FRD1	YEL047C	PSF3	Q12146	194 aa		13.74	□□□□□ -0.21
FRD1	YEL047C	HPR1	P17629	752 aa	Known RBP	13.73	□□□□□ -0.21
FRD1	YEL047C	YGR117C	P53270	476 aa		13.73	□□□□□ -0.21
FRD1	YEL047C	SEN54	Q02825	467 aa	Predicted RBP	13.73	□□□□□ -0.21
FRD1	YEL047C	MRPS35	P53292	345 aa		13.72	□□□□□ -0.21
FRD1	YEL047C	GRX7	P38068	203 aa		13.71	□□□□□ -0.22
FRD1	YEL047C	PEX21	P50091	288 aa		13.71	□□□□□ -0.22
FRD1	YEL047C	SNF3	P10870	884 aa		13.7	□□□□□ -0.22
FRD1	YEL047C	MDL2	P33311	773 aa		13.7	□□□□□ -0.22
FRD1	YEL047C	UTP7	P40055	554 aa	Known RBP	13.69	□□□□□ -0.22
FRD1	YEL047C	YMR147W	P40218	223 aa	Known RBP	13.69	□□□□□ -0.22
FRD1	YEL047C	EMP47	P43555	445 aa		13.69	□□□□□ -0.22
FRD1	YEL047C	PUS6	P53294	404 aa		13.69	□□□□□ -0.22
FRD1	YEL047C	ACK1	Q07622	623 aa	Predicted RBP	13.69	□□□□□ -0.22
FRD1	YEL047C	PBY1	P38254	753 aa		13.68	□□□□□ -0.22
FRD1	YEL047C	MTC3	P53077	123 aa		13.68	□□□□□ -0.22
FRD1	YEL047C	ECM16	Q04217	1267 aa	Known RBP	13.68	□□□□□ -0.22
FRD1	YEL047C	NSG2	P53898	299 aa		13.67	□□□□□ -0.22
FRD1	YEL047C	BRE1	Q07457	700 aa	Known RBP	13.67	□□□□□ -0.22
FRD1	YEL047C	FLO1	P32768	1537 aa		13.67	□□□□□ -0.22
FRD1	YEL047C	GSC2	P40989	1895 aa		13.67	□□□□□ -0.22
FRD1	YEL047C	VHR2	P40041	505 aa		13.66	□□□□□ -0.22
FRD1	YEL047C	BOI1	P38041	980 aa	Known RBP	13.65	□□□□□ -0.22
FRD1	YEL047C	APL6	P46682	809 aa		13.65	□□□□□ -0.22
FRD1	YEL047C	YJL171C	P46992	396 aa		13.65	□□□□□ -0.22
FRD1	YEL047C	CYB2	P00175	591 aa		13.64	□□□□□ -0.23
FRD1	YEL047C	CBP1	P07252	654 aa		13.64	□□□□□ -0.23
FRD1	YEL047C	RAD50	P12753	1312 aa		13.64	□□□□□ -0.23
FRD1	YEL047C	KTR1	P27810	393 aa	Known RBP	13.64	□□□□□ -0.23
FRD1	YEL047C	KAR5	Q04746	504 aa		13.62	□□□□□ -0.23
FRD1	YEL047C	PEA2	P40091	420 aa		13.61	□□□□□ -0.23
FRD1	YEL047C	VAS1	P07806	1104 aa	Known RBP	13.6	□□□□□ -0.23
FRD1	YEL047C	IRC8	P47046	822 aa		13.6	□□□□□ -0.23
FRD1	YEL047C	BBC1	P47068	1157 aa		13.6	□□□□□ -0.23
FRD1	YEL047C	PIP2	P52960	996 aa		13.6	□□□□□ -0.23
FRD1	YEL047C	RIM20	Q12033	661 aa		13.6	□□□□□ -0.23
FRD1	YEL047C	LAM4	P38800	1345 aa		13.59	□□□□□ -0.23
FRD1	YEL047C	OSH3	P38713	996 aa	Known RBP	13.59	□□□□□ -0.23
FRD1	YEL047C	STM1	P39015	273 aa	Known RBP	13.59	□□□□□ -0.23
FRD1	YEL047C	PKH3	Q03306	898 aa	Predicted RBP	13.59	□□□□□ -0.23
FRD1	YEL047C	BRN1	P38170	754 aa		13.57	□□□□□ -0.24
FRD1	YEL047C	YIL089W	P40500	205 aa		13.57	□□□□□ -0.24
FRD1	YEL047C	IOC3	P43596	787 aa		13.56	□□□□□ -0.24
FRD1	YEL047C	CWC15	Q03772	175 aa	Known RBP	13.56	□□□□□ -0.24
FRD1	YEL047C	AAP1	P37898	856 aa	Known RBP	13.56	□□□□□ -0.24
FRD1	YEL047C	PNT1	P38969	423 aa		13.56	□□□□□ -0.24
FRD1	YEL047C	TAH18	Q12181	623 aa		13.56	□□□□□ -0.24
FRD1	YEL047C	NPL4	P33755	580 aa		13.55	□□□□□ -0.24
FRD1	YEL047C	GEF1	P37020	779 aa		13.55	□□□□□ -0.24
FRD1	YEL047C	NIT1	P40447	199 aa		13.55	□□□□□ -0.24
FRD1	YEL047C	PPM2	Q08282	695 aa		13.55	□□□□□ -0.24
FRD1	YEL047C	COQ1	P18900	473 aa		13.54	□□□□□ -0.24
FRD1	YEL047C	OPI1	P21957	404 aa		13.54	□□□□□ -0.24
FRD1	YEL047C	KEL1	P38853	1164 aa	Known RBP	13.54	□□□□□ -0.24
FRD1	YEL047C	ENP2	P48234	707 aa	Known RBP	13.54	□□□□□ -0.24
FRD1	YEL047C	FPR4	Q06205	392 aa	Predicted RBP	13.54	□□□□□ -0.24
FRD1	YEL047C	ADP1	P25371	1049 aa		13.53	□□□□□ -0.24
FRD1	YEL047C	HXT17	P53631	564 aa		13.53	□□□□□ -0.24
FRD1	YEL047C	GCR2	Q01722	534 aa		13.53	□□□□□ -0.24
FRD1	YEL047C	CSR2	Q12734	1121 aa		13.53	□□□□□ -0.24
FRD1	YEL047C	KEL3	Q08979	651 aa	Predicted RBP	13.52	□□□□□ -0.25
FRD1	YEL047C	TOM1	Q03280	3268 aa		13.52	□□□□□ -0.25
FRD1	YEL047C	PMA1	P05030	918 aa	Known RBP	13.51	□□□□□ -0.25
FRD1	YEL047C	CHO2	P05374	869 aa	Known RBP	13.51	□□□□□ -0.25

Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms