RNA–Protein interactions for RNA: YDR545W

YRF1-1, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-1, Length 5,391 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-1YDR545W SPT5P27692 1063 aaKnown RBP8.6□□□□□ -1.03
YRF1-1YDR545W SAC6P32599 642 aaKnown RBP8.6□□□□□ -1.03
YRF1-1YDR545W RPO41P13433 1351 aaKnown RBP8.6□□□□□ -1.03
YRF1-1YDR545W DDP1Q99321 188 aaKnown RBP8.6□□□□□ -1.03
YRF1-1YDR545W RPS19AP07280 144 aaKnown RBP8.6□□□□□ -1.03
YRF1-1YDR545W RPS19BP07281 144 aaPredicted RBP8.6□□□□□ -1.03
YRF1-1YDR545W ILM1P47155 203 aa8.6□□□□□ -1.03
YRF1-1YDR545W ATG23Q06671 453 aa8.6□□□□□ -1.03
YRF1-1YDR545W RPO21P04050 1733 aaKnown RBP8.6□□□□□ -1.03
YRF1-1YDR545W TY1B-BRQ12193 1756 aa8.59□□□□□ -1.03
YRF1-1YDR545W TY1B-GR3Q12316 1755 aa8.59□□□□□ -1.03
YRF1-1YDR545W TY1B-ORQ92393 1755 aa8.59□□□□□ -1.03
YRF1-1YDR545W RAD3P06839 778 aa8.59□□□□□ -1.03
YRF1-1YDR545W AOS1Q06624 347 aa8.59□□□□□ -1.03
YRF1-1YDR545W ELG1Q12050 791 aa8.59□□□□□ -1.03
YRF1-1YDR545W CDC16P09798 840 aa8.59□□□□□ -1.03
YRF1-1YDR545W TY1B-JR2P47100 1755 aaKnown RBP8.59□□□□□ -1.03
YRF1-1YDR545W TY1B-ER2Q03619 1755 aa8.59□□□□□ -1.03
YRF1-1YDR545W TY1B-MR1Q04214 1755 aa8.59□□□□□ -1.03
YRF1-1YDR545W TY1B-MR2Q04670 1755 aaKnown RBP8.59□□□□□ -1.03
YRF1-1YDR545W TY1B-LR1Q12088 1755 aaKnown RBP8.59□□□□□ -1.03
YRF1-1YDR545W TY1B-NL1Q12112 1755 aa8.59□□□□□ -1.03
YRF1-1YDR545W TY1B-GR1Q12141 1755 aa8.59□□□□□ -1.03
YRF1-1YDR545W TY1B-BLQ12490 1755 aa8.59□□□□□ -1.03
YRF1-1YDR545W RPG1P38249 964 aaKnown RBP8.59□□□□□ -1.03
YRF1-1YDR545W GPA1P08539 472 aa8.58□□□□□ -1.04
YRF1-1YDR545W IPL1P38991 367 aa8.58□□□□□ -1.04
YRF1-1YDR545W GYL1Q04322 720 aa8.58□□□□□ -1.04
YRF1-1YDR545W CDC37P06101 506 aaKnown RBP8.58□□□□□ -1.04
YRF1-1YDR545W UBC1P21734 215 aaKnown RBP8.58□□□□□ -1.04
YRF1-1YDR545W VPS75P53853 264 aa8.58□□□□□ -1.04
YRF1-1YDR545W SEG2P34250 1132 aa8.58□□□□□ -1.04
YRF1-1YDR545W YGL082WP53155 381 aa8.58□□□□□ -1.04
YRF1-1YDR545W CHC1P22137 1653 aaKnown RBP8.57□□□□□ -1.04
YRF1-1YDR545W CPA2P03965 1118 aaKnown RBP8.57□□□□□ -1.04
YRF1-1YDR545W SEC14P24280 304 aaKnown RBP8.57□□□□□ -1.04
YRF1-1YDR545W VPS4P52917 437 aa8.57□□□□□ -1.04
YRF1-1YDR545W YGL242CP53066 181 aa8.57□□□□□ -1.04
YRF1-1YDR545W RAD1P06777 1100 aa8.57□□□□□ -1.04
YRF1-1YDR545W MRP7P12687 371 aa8.57□□□□□ -1.04
YRF1-1YDR545W RIM20Q12033 661 aa8.57□□□□□ -1.04
YRF1-1YDR545W TYS1P36421 394 aaKnown RBP8.57□□□□□ -1.04
YRF1-1YDR545W MLC1P53141 149 aa8.57□□□□□ -1.04
YRF1-1YDR545W RDS1P25611 832 aa8.56□□□□□ -1.04
YRF1-1YDR545W RFC5P38251 354 aa8.56□□□□□ -1.04
YRF1-1YDR545W MSH1P25846 959 aa8.56□□□□□ -1.04
YRF1-1YDR545W OLA1P38219 394 aaKnown RBP8.56□□□□□ -1.04
YRF1-1YDR545W RGD1P38339 666 aa8.56□□□□□ -1.04
YRF1-1YDR545W YHL017WP38745 532 aa8.56□□□□□ -1.04
YRF1-1YDR545W SRB4P32569 687 aa8.55□□□□□ -1.04
YRF1-1YDR545W WAR1Q03631 944 aa8.55□□□□□ -1.04
YRF1-1YDR545W VPS38Q05919 439 aa8.55□□□□□ -1.04
YRF1-1YDR545W YSH1Q06224 779 aaPredicted RBP8.55□□□□□ -1.04
YRF1-1YDR545W SIP3P38717 1229 aa8.55□□□□□ -1.04
YRF1-1YDR545W MRPS28P21771 286 aa8.55□□□□□ -1.04
YRF1-1YDR545W RAD24P32641 659 aa8.55□□□□□ -1.04
YRF1-1YDR545W HEL1P36113 551 aa8.54□□□□□ -1.04
YRF1-1YDR545W HUL5P53119 910 aa8.54□□□□□ -1.04
YRF1-1YDR545W MAL13P53338 473 aa8.54□□□□□ -1.04
YRF1-1YDR545W RRP14P36080 434 aaKnown RBP8.54□□□□□ -1.04
YRF1-1YDR545W DOP1Q03921 1698 aa8.54□□□□□ -1.04
YRF1-1YDR545W RGP1P16664 663 aa8.54□□□□□ -1.04
YRF1-1YDR545W GSY2P27472 705 aa8.54□□□□□ -1.04
YRF1-1YDR545W SSF1P38789 453 aaPredicted RBP8.54□□□□□ -1.04
YRF1-1YDR545W YVC1Q12324 675 aa8.54□□□□□ -1.04
YRF1-1YDR545W CDC8P00572 216 aa8.53□□□□□ -1.04
YRF1-1YDR545W VPS72Q03388 795 aa8.53□□□□□ -1.04
YRF1-1YDR545W RPS24AP0CX31 135 aaKnown RBP8.53□□□□□ -1.04
YRF1-1YDR545W RPS24BP0CX32 135 aaKnown RBP8.53□□□□□ -1.04
YRF1-1YDR545W YPT11P48559 417 aa8.53□□□□□ -1.04
YRF1-1YDR545W TSR1Q07381 788 aaKnown RBP8.53□□□□□ -1.04
YRF1-1YDR545W GCD7P32502 381 aaPredicted RBP8.53□□□□□ -1.04
YRF1-1YDR545W ECM21P38167 1117 aaKnown RBP8.53□□□□□ -1.04
YRF1-1YDR545W STE23Q06010 1027 aa8.53□□□□□ -1.04
YRF1-1YDR545W SDH5Q08230 162 aa8.53□□□□□ -1.04
YRF1-1YDR545W SLK19Q08581 821 aaKnown RBP8.53□□□□□ -1.04
YRF1-1YDR545W CLB4P24871 460 aa8.53□□□□□ -1.04
YRF1-1YDR545W PXR1P53335 271 aaPredicted RBP8.53□□□□□ -1.04
YRF1-1YDR545W GFD1Q04839 188 aaKnown RBP8.53□□□□□ -1.04
YRF1-1YDR545W RAD5P32849 1169 aaPredicted RBP8.53□□□□□ -1.04
YRF1-1YDR545W VID28P40547 921 aa8.53□□□□□ -1.04
YRF1-1YDR545W TRS85P46944 698 aa8.53□□□□□ -1.04
YRF1-1YDR545W ENP2P48234 707 aaKnown RBP8.53□□□□□ -1.04
YRF1-1YDR545W MCM16Q12262 181 aa8.53□□□□□ -1.04
YRF1-1YDR545W BCK1Q01389 1478 aa8.52□□□□□ -1.04
YRF1-1YDR545W PDC1P06169 563 aaKnown RBP8.52□□□□□ -1.05
YRF1-1YDR545W JJJ1P53863 590 aa8.52□□□□□ -1.05
YRF1-1YDR545W CTI6Q08923 506 aa8.52□□□□□ -1.05
YRF1-1YDR545W SPO14P36126 1683 aa8.52□□□□□ -1.05
YRF1-1YDR545W COQ4O13525 335 aa8.52□□□□□ -1.05
YRF1-1YDR545W HXK1P04806 485 aaKnown RBP8.52□□□□□ -1.05
YRF1-1YDR545W STO1P34160 861 aaKnown RBP8.52□□□□□ -1.05
YRF1-1YDR545W TOM71P38825 639 aaKnown RBP8.52□□□□□ -1.05
YRF1-1YDR545W SET2P46995 733 aaKnown RBP8.52□□□□□ -1.05
YRF1-1YDR545W RAD51P25454 400 aa8.52□□□□□ -1.05
YRF1-1YDR545W YME2P32843 850 aa8.52□□□□□ -1.05
YRF1-1YDR545W CAF130P53280 1122 aaPredicted RBP8.52□□□□□ -1.05
YRF1-1YDR545W PCH2P38126 564 aa8.51□□□□□ -1.05
YRF1-1YDR545W SUP35P05453 685 aaKnown RBP8.51□□□□□ -1.05
YRF1-1YDR545W STE11P23561 717 aa8.51□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 210.2 ms