RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C TY1B-ER2Q03619 1755 aa3.2□□□□□ -1.9
SSN2YDR443C TY1B-MR1Q04214 1755 aa3.2□□□□□ -1.9
SSN2YDR443C TY1B-MR2Q04670 1755 aaKnown RBP3.2□□□□□ -1.9
SSN2YDR443C TY1B-LR1Q12088 1755 aaKnown RBP3.2□□□□□ -1.9
SSN2YDR443C TY1B-NL1Q12112 1755 aa3.2□□□□□ -1.9
SSN2YDR443C TY1B-GR1Q12141 1755 aa3.2□□□□□ -1.9
SSN2YDR443C TY1B-BLQ12490 1755 aa3.2□□□□□ -1.9
SSN2YDR443C ERR1P0CX10 437 aa3.2□□□□□ -1.9
SSN2YDR443C ERR2P0CX11 437 aa3.2□□□□□ -1.9
SSN2YDR443C YKL222CP35995 705 aa3.2□□□□□ -1.9
SSN2YDR443C ORC6P38826 435 aa3.2□□□□□ -1.9
SSN2YDR443C YGL081WP53156 320 aa3.2□□□□□ -1.9
SSN2YDR443C ESF2P53743 316 aaKnown RBP3.2□□□□□ -1.9
SSN2YDR443C PIB1Q06651 286 aa3.2□□□□□ -1.9
SSN2YDR443C TMA17Q12513 150 aa3.2□□□□□ -1.9
SSN2YDR443C SWI3P32591 825 aa3.2□□□□□ -1.9
SSN2YDR443C YRF1-1P0CX20 1796 aa3.19□□□□□ -1.9
SSN2YDR443C YRF1-5P0CX21 1796 aa3.19□□□□□ -1.9
SSN2YDR443C YRF1-8P0CX22 1796 aa3.19□□□□□ -1.9
SSN2YDR443C HIR1P32479 840 aa3.19□□□□□ -1.9
SSN2YDR443C EBP2P36049 427 aaKnown RBP3.19□□□□□ -1.9
SSN2YDR443C ABZ1P37254 787 aaPredicted RBP3.19□□□□□ -1.9
SSN2YDR443C YOR1P53049 1477 aa3.19□□□□□ -1.9
SSN2YDR443C RLP24Q07915 199 aaKnown RBP3.19□□□□□ -1.9
SSN2YDR443C SIT4P20604 311 aa3.19□□□□□ -1.9
SSN2YDR443C ESF1Q06344 628 aaKnown RBP3.19□□□□□ -1.9
SSN2YDR443C TY4B-PA0A0B7P3V8 1104 aa3.19□□□□□ -1.9
SSN2YDR443C MPH2P0CD99 609 aa3.19□□□□□ -1.9
SSN2YDR443C MPH3P0CE00 602 aa3.19□□□□□ -1.9
SSN2YDR443C PPH3P32345 308 aa3.19□□□□□ -1.9
SSN2YDR443C CDC11P32458 415 aa3.19□□□□□ -1.9
SSN2YDR443C PET112P33893 541 aa3.19□□□□□ -1.9
SSN2YDR443C YNR029CP53729 429 aaKnown RBP3.19□□□□□ -1.9
SSN2YDR443C MCM16Q12262 181 aa3.19□□□□□ -1.9
SSN2YDR443C TY4A-HQ6Q5P6 413 aa3.19□□□□□ -1.9
SSN2YDR443C SPT5P27692 1063 aaKnown RBP3.19□□□□□ -1.9
SSN2YDR443C GDE1Q02979 1223 aa3.19□□□□□ -1.9
SSN2YDR443C UTP14Q04500 899 aaKnown RBP3.19□□□□□ -1.9
SSN2YDR443C SLY41P22215 453 aa3.18□□□□□ -1.9
SSN2YDR443C ATH1P48016 1211 aa3.18□□□□□ -1.9
SSN2YDR443C YGR021WP53212 290 aa3.18□□□□□ -1.9
SSN2YDR443C YPR109WQ06104 294 aa3.18□□□□□ -1.9
SSN2YDR443C YOL036WQ08206 761 aa3.18□□□□□ -1.9
SSN2YDR443C MTC2P34246 357 aa3.18□□□□□ -1.9
SSN2YDR443C ENP1P38333 483 aaKnown RBP3.18□□□□□ -1.9
SSN2YDR443C TDA5Q06417 326 aaKnown RBP3.18□□□□□ -1.9
SSN2YDR443C MPD2Q99316 277 aa3.18□□□□□ -1.9
SSN2YDR443C ACS2P52910 683 aaKnown RBP3.18□□□□□ -1.9
SSN2YDR443C ALO1P54783 526 aaKnown RBP3.18□□□□□ -1.9
SSN2YDR443C NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
SSN2YDR443C GPI13Q07830 1017 aa3.18□□□□□ -1.9
SSN2YDR443C NOP14Q99207 810 aaKnown RBP3.18□□□□□ -1.9
SSN2YDR443C FOB1O13329 566 aa3.17□□□□□ -1.9
SSN2YDR443C MVP1P40959 511 aaKnown RBP3.17□□□□□ -1.9
SSN2YDR443C ROM1P53046 1155 aa3.17□□□□□ -1.9
SSN2YDR443C YLR125WQ12138 136 aa3.17□□□□□ -1.9
SSN2YDR443C SNT2P53127 1403 aa3.17□□□□□ -1.9
SSN2YDR443C HOS4P40480 1083 aa3.17□□□□□ -1.9
SSN2YDR443C YPP1P46951 817 aa3.17□□□□□ -1.9
SSN2YDR443C SCY1P53009 804 aa3.17□□□□□ -1.9
SSN2YDR443C PPM2Q08282 695 aa3.17□□□□□ -1.9
SSN2YDR443C SRF1Q12516 437 aa3.17□□□□□ -1.9
SSN2YDR443C TMA7Q3E764 64 aaKnown RBP3.17□□□□□ -1.9
SSN2YDR443C SRS2P12954 1174 aa3.17□□□□□ -1.9
SSN2YDR443C HAP4P14064 554 aa3.17□□□□□ -1.9
SSN2YDR443C DPB3P27344 201 aa3.17□□□□□ -1.9
SSN2YDR443C SFP1P32432 683 aa3.17□□□□□ -1.9
SSN2YDR443C ACF4P47129 309 aa3.17□□□□□ -1.9
SSN2YDR443C FAA4P47912 694 aaKnown RBP3.17□□□□□ -1.9
SSN2YDR443C TYW3P53177 273 aa3.17□□□□□ -1.9
SSN2YDR443C TLG1Q03322 224 aa3.17□□□□□ -1.9
SSN2YDR443C MSH2P25847 964 aa3.16□□□□□ -1.9
SSN2YDR443C PRP43P53131 767 aaKnown RBP3.16□□□□□ -1.9
SSN2YDR443C GFD2P25370 566 aaKnown RBP3.16□□□□□ -1.9
SSN2YDR443C MRC1P25588 1096 aa3.16□□□□□ -1.9
SSN2YDR443C HLJ1P48353 224 aa3.16□□□□□ -1.9
SSN2YDR443C RTF1P53064 558 aa3.16□□□□□ -1.9
SSN2YDR443C DNF2Q12675 1612 aa3.16□□□□□ -1.9
SSN2YDR443C CIT1P00890 479 aa3.16□□□□□ -1.9
SSN2YDR443C PDI1P17967 522 aaKnown RBP3.16□□□□□ -1.9
SSN2YDR443C YGR273CP53329 174 aa3.16□□□□□ -1.9
SSN2YDR443C REC8Q12188 680 aa3.16□□□□□ -1.9
SSN2YDR443C SPO14P36126 1683 aa3.16□□□□□ -1.9
SSN2YDR443C STU1P38198 1513 aa3.16□□□□□ -1.9
SSN2YDR443C DPS1P04802 557 aaKnown RBP3.16□□□□□ -1.9
SSN2YDR443C PHO4P07270 312 aaKnown RBP3.16□□□□□ -1.9
SSN2YDR443C PIF1P07271 859 aa3.16□□□□□ -1.9
SSN2YDR443C YHL008CP38750 627 aa3.16□□□□□ -1.9
SSN2YDR443C TAT2P38967 592 aa3.16□□□□□ -1.9
SSN2YDR443C SNF7P39929 240 aaKnown RBP3.16□□□□□ -1.9
SSN2YDR443C NDE1P40215 560 aa3.16□□□□□ -1.9
SSN2YDR443C CYB2P00175 591 aa3.15□□□□□ -1.9
SSN2YDR443C CLB5P30283 435 aa3.15□□□□□ -1.9
SSN2YDR443C YKL069WP36088 180 aa3.15□□□□□ -1.9
SSN2YDR443C MUM2P38236 366 aa3.15□□□□□ -1.9
SSN2YDR443C RSC30P38781 883 aa3.15□□□□□ -1.9
SSN2YDR443C YGR237CP50089 785 aa3.15□□□□□ -1.9
SSN2YDR443C RPL8AP17076 256 aaKnown RBP3.15□□□□□ -1.91
SSN2YDR443C PHO87P25360 923 aa3.15□□□□□ -1.91
SSN2YDR443C YGR125WP53273 1036 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 97.4 ms