RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAL1	YDR348C	SDH2	P21801	266 aa		5.89	□□□□□ -1.47
PAL1	YDR348C	TCD1	P38756	429 aa		5.88	□□□□□ -1.47
PAL1	YDR348C	THI22	Q06490	572 aa		5.88	□□□□□ -1.47
PAL1	YDR348C	LAM6	Q08001	693 aa		5.88	□□□□□ -1.47
PAL1	YDR348C	AMS1	P22855	1083 aa		5.87	□□□□□ -1.47
PAL1	YDR348C	SPC110	P32380	944 aa		5.87	□□□□□ -1.47
PAL1	YDR348C	LTV1	P34078	463 aa		5.87	□□□□□ -1.47
PAL1	YDR348C	CIN4	P39110	191 aa		5.87	□□□□□ -1.47
PAL1	YDR348C	PAC1	P39946	494 aa	Known RBP	5.87	□□□□□ -1.47
PAL1	YDR348C	RRT14	P40470	206 aa		5.87	□□□□□ -1.47
PAL1	YDR348C	PUS6	P53294	404 aa		5.87	□□□□□ -1.47
PAL1	YDR348C	HEF3	P53978	1044 aa	Known RBP	5.87	□□□□□ -1.47
PAL1	YDR348C	SRC1	Q03707	834 aa		5.87	□□□□□ -1.47
PAL1	YDR348C	NUP145	P49687	1317 aa		5.86	□□□□□ -1.47
PAL1	YDR348C	PSK1	P31374	1356 aa		5.86	□□□□□ -1.47
PAL1	YDR348C	BNR1	P40450	1375 aa		5.86	□□□□□ -1.47
PAL1	YDR348C	ERG12	P07277	443 aa		5.86	□□□□□ -1.47
PAL1	YDR348C	SWE1	P32944	819 aa		5.86	□□□□□ -1.47
PAL1	YDR348C	CSE4	P36012	229 aa		5.86	□□□□□ -1.47
PAL1	YDR348C	MIC60	P36112	540 aa		5.86	□□□□□ -1.47
PAL1	YDR348C	MET10	P39692	1035 aa		5.86	□□□□□ -1.47
PAL1	YDR348C	RVS167	P39743	482 aa	Known RBP	5.86	□□□□□ -1.47
PAL1	YDR348C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.86	□□□□□ -1.47	not detected
PAL1	YDR348C	CIR1	P42940	261 aa		5.86	□□□□□ -1.47
PAL1	YDR348C	NPA3	P47122	385 aa		5.86	□□□□□ -1.47
PAL1	YDR348C	YGL081W	P53156	320 aa		5.86	□□□□□ -1.47
PAL1	YDR348C	YRF1-4	O13559	1382 aa		5.85	□□□□□ -1.47
PAL1	YDR348C	SIR4	P11978	1358 aa		5.85	□□□□□ -1.47
PAL1	YDR348C	YML133C	Q03099	1374 aa		5.85	□□□□□ -1.47
PAL1	YDR348C	YLL067C	Q07888	1374 aa		5.85	□□□□□ -1.47
PAL1	YDR348C	YLL066C	Q99208	1374 aa		5.85	□□□□□ -1.47
PAL1	YDR348C	RPN12	P32496	274 aa		5.85	□□□□□ -1.47
PAL1	YDR348C	YAP3	P38749	330 aa		5.85	□□□□□ -1.47
PAL1	YDR348C	CHZ1	P40019	153 aa	Predicted RBP	5.85	□□□□□ -1.47
PAL1	YDR348C	VPS60	Q03390	229 aa		5.85	□□□□□ -1.47
PAL1	YDR348C	MAK16	P10962	306 aa	Predicted RBP	5.84	□□□□□ -1.47
PAL1	YDR348C	PRD1	P25375	712 aa		5.84	□□□□□ -1.47
PAL1	YDR348C	MRF1	P30775	413 aa	Predicted RBP	5.84	□□□□□ -1.47
PAL1	YDR348C	DLD1	P32891	587 aa		5.84	□□□□□ -1.47
PAL1	YDR348C	MED8	P38304	223 aa		5.84	□□□□□ -1.47
PAL1	YDR348C	BDH2	P39713	417 aa		5.84	□□□□□ -1.47
PAL1	YDR348C	RRN7	P40992	514 aa		5.84	□□□□□ -1.47
PAL1	YDR348C	YNL108C	P53929	270 aa		5.84	□□□□□ -1.47
PAL1	YDR348C	YDL206W	Q12424	762 aa		5.84	□□□□□ -1.47
PAL1	YDR348C	DNF3	Q12674	1656 aa		5.84	□□□□□ -1.48
PAL1	YDR348C	TIF1	P10081	395 aa	Known RBP	5.84	□□□□□ -1.48
PAL1	YDR348C	YDJ1	P25491	409 aa	Known RBP	5.84	□□□□□ -1.48
PAL1	YDR348C	ECM1	P39715	212 aa		5.84	□□□□□ -1.48
PAL1	YDR348C	DSN1	P40568	576 aa		5.84	□□□□□ -1.48
PAL1	YDR348C	STU2	P46675	888 aa		5.84	□□□□□ -1.48
PAL1	YDR348C	SFI1	Q12369	946 aa		5.84	□□□□□ -1.48
PAL1	YDR348C	YEL077C	Q3E7X8	1277 aa		5.84	□□□□□ -1.48
PAL1	YDR348C	NOP14	Q99207	810 aa	Known RBP	5.84	□□□□□ -1.48
PAL1	YDR348C	CLB1	P24868	471 aa		5.83	□□□□□ -1.48
PAL1	YDR348C	HST1	P53685	503 aa		5.83	□□□□□ -1.48
PAL1	YDR348C	KRE33	P53914	1056 aa	Known RBP	5.83	□□□□□ -1.48
PAL1	YDR348C	VPS20	Q04272	221 aa		5.83	□□□□□ -1.48
PAL1	YDR348C	UTP13	Q05946	817 aa	Known RBP	5.83	□□□□□ -1.48
PAL1	YDR348C	RTT109	Q07794	436 aa		5.83	□□□□□ -1.48
PAL1	YDR348C	RAD50	P12753	1312 aa		5.82	□□□□□ -1.48
PAL1	YDR348C	RAD9	P14737	1309 aa		5.82	□□□□□ -1.48
PAL1	YDR348C	CYC8	P14922	966 aa		5.82	□□□□□ -1.48
PAL1	YDR348C	DEP1	P31385	405 aa		5.82	□□□□□ -1.48
PAL1	YDR348C	TBF1	Q02457	562 aa		5.82	□□□□□ -1.48
PAL1	YDR348C	TAF8	Q03750	510 aa		5.82	□□□□□ -1.48
PAL1	YDR348C	HRQ1	Q05549	1077 aa		5.82	□□□□□ -1.48
PAL1	YDR348C	NKP2	Q06162	153 aa		5.82	□□□□□ -1.48
PAL1	YDR348C	SUP45	P12385	437 aa	Known RBP	5.81	□□□□□ -1.48
PAL1	YDR348C	PBY1	P38254	753 aa		5.81	□□□□□ -1.48
PAL1	YDR348C	GCR2	Q01722	534 aa		5.81	□□□□□ -1.48
PAL1	YDR348C	ECM16	Q04217	1267 aa	Known RBP	5.81	□□□□□ -1.48
PAL1	YDR348C	NUP188	P52593	1655 aa	Known RBP	5.8	□□□□□ -1.48
PAL1	YDR348C	ENO2	P00925	437 aa	Known RBP	5.8	□□□□□ -1.48
PAL1	YDR348C	PDC1	P06169	563 aa	Known RBP	5.8	□□□□□ -1.48
PAL1	YDR348C	MFT1	P33441	392 aa	Known RBP	5.8	□□□□□ -1.48
PAL1	YDR348C	DEF1	P35732	738 aa	Known RBP	5.8	□□□□□ -1.48
PAL1	YDR348C	BRN1	P38170	754 aa		5.8	□□□□□ -1.48
PAL1	YDR348C	RPA14	P50106	137 aa		5.8	□□□□□ -1.48
PAL1	YDR348C	RNT1	Q02555	471 aa		5.8	□□□□□ -1.48
PAL1	YDR348C	BMS1	Q08965	1183 aa	Known RBP	5.8	□□□□□ -1.48
PAL1	YDR348C	SPT16	P32558	1035 aa	Known RBP	5.79	□□□□□ -1.48
PAL1	YDR348C	DID4	P36108	232 aa		5.79	□□□□□ -1.48
PAL1	YDR348C	SIC1	P38634	284 aa		5.79	□□□□□ -1.48
PAL1	YDR348C	NMD2	P38798	1089 aa	Known RBP	5.79	□□□□□ -1.48
PAL1	YDR348C	HXT13	P39924	564 aa		5.79	□□□□□ -1.48
PAL1	YDR348C	RSM25	P40496	264 aa		5.79	□□□□□ -1.48
PAL1	YDR348C	CEP3	P40969	608 aa		5.79	□□□□□ -1.48
PAL1	YDR348C	KRI1	P42846	591 aa	Known RBP	5.79	□□□□□ -1.48
PAL1	YDR348C	CWH41	P53008	833 aa		5.79	□□□□□ -1.48
PAL1	YDR348C	TIM50	Q02776	476 aa		5.79	□□□□□ -1.48
PAL1	YDR348C	APC11	Q12157	165 aa		5.79	□□□□□ -1.48
PAL1	YDR348C	BIK1	P11709	440 aa		5.79	□□□□□ -1.48
PAL1	YDR348C	KAR2	P16474	682 aa	Known RBP	5.79	□□□□□ -1.48
PAL1	YDR348C	MNR2	P35724	969 aa		5.79	□□□□□ -1.48
PAL1	YDR348C	YPR097W	Q06839	1073 aa		5.79	□□□□□ -1.48
PAL1	YDR348C	YRF1-1	P0CX20	1796 aa		5.78	□□□□□ -1.48
PAL1	YDR348C	YRF1-5	P0CX21	1796 aa		5.78	□□□□□ -1.48
PAL1	YDR348C	YRF1-8	P0CX22	1796 aa		5.78	□□□□□ -1.48
PAL1	YDR348C	MPE1	P35728	441 aa	Known RBP	5.78	□□□□□ -1.48
PAL1	YDR348C	MRPL10	P36520	322 aa		5.78	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms