RNA–Protein interactions for RNA: YDR238C

SEC26, Transcript of Essential beta-coat protein of the COPI coatomer, yeast

Gene SEC26, Length 2,922 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC26	YDR238C	ITC1	P53125	1264 aa		3.1	□□□□□ -1.91
SEC26	YDR238C	SPO1	P53541	631 aa		3.1	□□□□□ -1.91
SEC26	YDR238C	EAF7	P53911	425 aa	Known RBP	3.1	□□□□□ -1.91
SEC26	YDR238C	GRE2	Q12068	342 aa	Known RBP	3.1	□□□□□ -1.91
SEC26	YDR238C	RPL22A	P05749	121 aa	Known RBP	3.1	□□□□□ -1.91
SEC26	YDR238C	LPD1	P09624	499 aa	Known RBP	3.1	□□□□□ -1.91
SEC26	YDR238C	EAP1	P36041	632 aa	Known RBP	3.1	□□□□□ -1.91
SEC26	YDR238C	SNF7	P39929	240 aa	Known RBP	3.1	□□□□□ -1.91
SEC26	YDR238C	PSK2	Q08217	1101 aa		3.1	□□□□□ -1.91
SEC26	YDR238C	PCT1	P13259	424 aa		3.09	□□□□□ -1.91
SEC26	YDR238C	NUP133	P36161	1157 aa		3.09	□□□□□ -1.91
SEC26	YDR238C	ALD3	P54114	506 aa		3.09	□□□□□ -1.91
SEC26	YDR238C	ETT1	Q08421	412 aa	Known RBP	3.09	□□□□□ -1.91
SEC26	YDR238C	NOT3	P06102	836 aa	Known RBP	3.09	□□□□□ -1.92
SEC26	YDR238C	ELM1	P32801	640 aa		3.09	□□□□□ -1.92
SEC26	YDR238C	DLD1	P32891	587 aa		3.09	□□□□□ -1.92
SEC26	YDR238C	TTI1	P36097	1038 aa		3.09	□□□□□ -1.92
SEC26	YDR238C	SYF1	Q04048	859 aa	Predicted RBP	3.09	□□□□□ -1.92
SEC26	YDR238C	SSF2	Q12153	453 aa	Predicted RBP	3.09	□□□□□ -1.92
SEC26	YDR238C	PSH1	Q12161	406 aa		3.09	□□□□□ -1.92
SEC26	YDR238C	TAF13	P11747	167 aa		3.08	□□□□□ -1.92
SEC26	YDR238C	SIT4	P20604	311 aa		3.08	□□□□□ -1.92
SEC26	YDR238C	TOS1	P38288	455 aa		3.08	□□□□□ -1.92
SEC26	YDR238C	IOC3	P43596	787 aa		3.08	□□□□□ -1.92
SEC26	YDR238C	YJL181W	P46987	611 aa		3.08	□□□□□ -1.92
SEC26	YDR238C	HST1	P53685	503 aa		3.08	□□□□□ -1.92
SEC26	YDR238C	KTR1	P27810	393 aa	Known RBP	3.08	□□□□□ -1.92
SEC26	YDR238C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
SEC26	YDR238C	DCW1	P36091	449 aa		3.08	□□□□□ -1.92
SEC26	YDR238C	PFF1	P38244	976 aa		3.08	□□□□□ -1.92
SEC26	YDR238C	NPR2	P39923	615 aa		3.08	□□□□□ -1.92
SEC26	YDR238C	TEA1	P47988	759 aa		3.08	□□□□□ -1.92
SEC26	YDR238C	ATH1	P48016	1211 aa		3.08	□□□□□ -1.92
SEC26	YDR238C	APP1	P53933	587 aa		3.08	□□□□□ -1.92
SEC26	YDR238C	YDR090C	Q03193	310 aa		3.08	□□□□□ -1.92
SEC26	YDR238C	KEX1	P09620	729 aa		3.07	□□□□□ -1.92
SEC26	YDR238C	MPH3	P0CE00	602 aa		3.07	□□□□□ -1.92
SEC26	YDR238C	RFT1	P38206	574 aa	Predicted RBP	3.07	□□□□□ -1.92
SEC26	YDR238C	YHL017W	P38745	532 aa		3.07	□□□□□ -1.92
SEC26	YDR238C	AIM9	P40053	627 aa	Known RBP	3.07	□□□□□ -1.92
SEC26	YDR238C	ALD2	P47771	506 aa		3.07	□□□□□ -1.92
SEC26	YDR238C	ECM23	Q02710	187 aa		3.07	□□□□□ -1.92
SEC26	YDR238C	SNU66	Q12420	587 aa	Predicted RBP	3.07	□□□□□ -1.92
SEC26	YDR238C	SRS2	P12954	1174 aa		3.07	□□□□□ -1.92
SEC26	YDR238C	CLC1	P17891	233 aa		3.07	□□□□□ -1.92
SEC26	YDR238C	ROX1	P25042	368 aa		3.07	□□□□□ -1.92
SEC26	YDR238C	AAP1	P37898	856 aa	Known RBP	3.07	□□□□□ -1.92
SEC26	YDR238C	UBP14	P38237	781 aa	Known RBP	3.07	□□□□□ -1.92
SEC26	YDR238C	ENP2	P48234	707 aa	Known RBP	3.07	□□□□□ -1.92
SEC26	YDR238C	COG8	Q04632	607 aa		3.07	□□□□□ -1.92
SEC26	YDR238C	TUM1	Q08686	304 aa	Known RBP	3.07	□□□□□ -1.92
SEC26	YDR238C	TAH18	Q12181	623 aa		3.07	□□□□□ -1.92
SEC26	YDR238C	CLF1	Q12309	687 aa	Predicted RBP	3.07	□□□□□ -1.92
SEC26	YDR238C	LDB19	Q12502	818 aa		3.07	□□□□□ -1.92
SEC26	YDR238C	HTA1	P04911	132 aa	Known RBP	3.06	□□□□□ -1.92
SEC26	YDR238C	HTA2	P04912	132 aa		3.06	□□□□□ -1.92
SEC26	YDR238C	MSP1	P28737	362 aa		3.06	□□□□□ -1.92
SEC26	YDR238C	GLN1	P32288	370 aa	Known RBP	3.06	□□□□□ -1.92
SEC26	YDR238C	EBP2	P36049	427 aa	Known RBP	3.06	□□□□□ -1.92
SEC26	YDR238C	RFC1	P38630	861 aa	Known RBP	3.06	□□□□□ -1.92
SEC26	YDR238C	UBP16	Q02863	499 aa		3.06	□□□□□ -1.92
SEC26	YDR238C	ERO1	Q03103	563 aa		3.06	□□□□□ -1.92
SEC26	YDR238C	RIM20	Q12033	661 aa		3.06	□□□□□ -1.92
SEC26	YDR238C	YPL150W	Q12152	901 aa		3.06	□□□□□ -1.92
SEC26	YDR238C	CBP3	P21560	335 aa		3.06	□□□□□ -1.92
SEC26	YDR238C	SEC20	P28791	383 aa		3.06	□□□□□ -1.92
SEC26	YDR238C	KAR5	Q04746	504 aa		3.06	□□□□□ -1.92
SEC26	YDR238C	DPH6	Q12429	685 aa		3.06	□□□□□ -1.92
SEC26	YDR238C	VAS1	P07806	1104 aa	Known RBP	3.06	□□□□□ -1.92
SEC26	YDR238C	GUT1	P32190	709 aa		3.06	□□□□□ -1.92
SEC26	YDR238C	BRN1	P38170	754 aa		3.06	□□□□□ -1.92
SEC26	YDR238C	CRG1	P38892	291 aa	RIP-Chip data	3.06	□□□□□ -1.92	not detected
SEC26	YDR238C	GRX6	Q12438	231 aa		3.06	□□□□□ -1.92
SEC26	YDR238C	MYO1	P08964	1928 aa		3.05	□□□□□ -1.92
SEC26	YDR238C	TRL1	P09880	827 aa	Known RBP	3.05	□□□□□ -1.92
SEC26	YDR238C	MATALPHA2	P0CY08	210 aa		3.05	□□□□□ -1.92
SEC26	YDR238C	HMLALPHA2	P0CY09	210 aa		3.05	□□□□□ -1.92
SEC26	YDR238C	GLO3	P38682	493 aa	Known RBP	3.05	□□□□□ -1.92
SEC26	YDR238C	RPN11	P43588	306 aa	Known RBP	3.05	□□□□□ -1.92
SEC26	YDR238C	FPR4	Q06205	392 aa	Predicted RBP	3.05	□□□□□ -1.92
SEC26	YDR238C	AIR2	Q12476	344 aa	Known RBP	3.05	□□□□□ -1.92
SEC26	YDR238C	PMD1	P32634	1753 aa		3.05	□□□□□ -1.92
SEC26	YDR238C	MET1	P36150	593 aa		3.05	□□□□□ -1.92
SEC26	YDR238C	ERT1	P38140	529 aa		3.05	□□□□□ -1.92
SEC26	YDR238C	KRI1	P42846	591 aa	Known RBP	3.05	□□□□□ -1.92
SEC26	YDR238C	BDP1	P46678	594 aa		3.05	□□□□□ -1.92
SEC26	YDR238C	MRPS35	P53292	345 aa		3.05	□□□□□ -1.92
SEC26	YDR238C	KRE33	P53914	1056 aa	Known RBP	3.05	□□□□□ -1.92
SEC26	YDR238C	ALO1	P54783	526 aa	Known RBP	3.05	□□□□□ -1.92
SEC26	YDR238C	PKH3	Q03306	898 aa	Predicted RBP	3.05	□□□□□ -1.92
SEC26	YDR238C	SEC18	P18759	758 aa	Known RBP	3.04	□□□□□ -1.92
SEC26	YDR238C	MCM3	P24279	971 aa	Known RBP	3.04	□□□□□ -1.92
SEC26	YDR238C	MPE1	P35728	441 aa	Known RBP	3.04	□□□□□ -1.92
SEC26	YDR238C	YBR287W	P38355	427 aa		3.04	□□□□□ -1.92
SEC26	YDR238C	PKH1	Q03407	766 aa		3.04	□□□□□ -1.92
SEC26	YDR238C	VPS64	Q03944	604 aa		3.04	□□□□□ -1.92
SEC26	YDR238C	FLO1	P32768	1537 aa		3.04	□□□□□ -1.92
SEC26	YDR238C	PGI1	P12709	554 aa	Known RBP	3.04	□□□□□ -1.92
SEC26	YDR238C	RTG1	P32607	177 aa		3.04	□□□□□ -1.92
SEC26	YDR238C	YKL222C	P35995	705 aa		3.04	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms