RNA–Protein interactions for RNA: YDR228C

PCF11, Transcript of mRNA 3' end processing factor, yeastyeast

Gene PCF11, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCF11YDR228C PUF6Q04373 656 aaKnown RBP4.14□□□□□ -1.75
PCF11YDR228C CWH41P53008 833 aa4.13□□□□□ -1.75
PCF11YDR228C YNR040WP53736 256 aa4.13□□□□□ -1.75
PCF11YDR228C NOB1Q08444 459 aaKnown RBP4.13□□□□□ -1.75
PCF11YDR228C YPR053CQ6Q5F3 151 aa4.13□□□□□ -1.75
PCF11YDR228C MRPL33P20084 86 aa4.13□□□□□ -1.75
PCF11YDR228C NCL1P38205 684 aaKnown RBP4.13□□□□□ -1.75
PCF11YDR228C APM2P38700 605 aa4.13□□□□□ -1.75
PCF11YDR228C QDR2P40474 542 aa4.13□□□□□ -1.75
PCF11YDR228C PRK1P40494 810 aa4.13□□□□□ -1.75
PCF11YDR228C CWC15Q03772 175 aaKnown RBP4.13□□□□□ -1.75
PCF11YDR228C SSA4P22202 642 aaKnown RBP4.12□□□□□ -1.75
PCF11YDR228C MET1P36150 593 aa4.12□□□□□ -1.75
PCF11YDR228C YCK2P23292 546 aaKnown RBP4.11□□□□□ -1.75
PCF11YDR228C VMA3P25515 160 aa4.11□□□□□ -1.75
PCF11YDR228C NAB2P32505 525 aaKnown RBP RIP-Chip data4.11□□□□□ -1.75 RIP-Chip
PCF11YDR228C BOI2P39969 1040 aa4.11□□□□□ -1.75
PCF11YDR228C ALD4P46367 519 aaKnown RBP4.11□□□□□ -1.75
PCF11YDR228C YNR014WP53719 212 aa4.11□□□□□ -1.75
PCF11YDR228C YMR187CQ03236 431 aa4.11□□□□□ -1.75
PCF11YDR228C YML083CQ04526 418 aa4.11□□□□□ -1.75
PCF11YDR228C SRS2P12954 1174 aa4.1□□□□□ -1.75
PCF11YDR228C YER156CP40093 338 aaKnown RBP4.1□□□□□ -1.75
PCF11YDR228C ITC1P53125 1264 aa4.1□□□□□ -1.75
PCF11YDR228C YDR215CQ12240 137 aa4.1□□□□□ -1.75
PCF11YDR228C YOR296WQ08748 1289 aa4.09□□□□□ -1.75
PCF11YDR228C IDI1P15496 288 aa4.09□□□□□ -1.76
PCF11YDR228C DYS1P38791 387 aa4.09□□□□□ -1.76
PCF11YDR228C NAR1P23503 491 aaKnown RBP4.08□□□□□ -1.76
PCF11YDR228C ISC10P32645 267 aa4.08□□□□□ -1.76
PCF11YDR228C FOX2Q02207 900 aaKnown RBP4.08□□□□□ -1.76
PCF11YDR228C PUN1Q06991 263 aa4.08□□□□□ -1.76
PCF11YDR228C RLF2Q12495 606 aa4.08□□□□□ -1.76
PCF11YDR228C MRP10O75012 95 aa4.07□□□□□ -1.76
PCF11YDR228C KTR2P33550 425 aa4.07□□□□□ -1.76
PCF11YDR228C PGM2P37012 569 aaKnown RBP4.07□□□□□ -1.76
PCF11YDR228C LDH1P38139 375 aa4.07□□□□□ -1.76
PCF11YDR228C GIP1P38229 639 aa4.07□□□□□ -1.76
PCF11YDR228C SLN1P39928 1220 aaPredicted RBP4.07□□□□□ -1.76
PCF11YDR228C GIS4Q04233 774 aa4.07□□□□□ -1.76
PCF11YDR228C APC11Q12157 165 aa4.07□□□□□ -1.76
PCF11YDR228C NHA1Q99271 985 aa4.07□□□□□ -1.76
PCF11YDR228C BSD2P38356 321 aa4.07□□□□□ -1.76
PCF11YDR228C TPS3P38426 1054 aaKnown RBP4.07□□□□□ -1.76
PCF11YDR228C SUB2Q07478 446 aaKnown RBP4.07□□□□□ -1.76
PCF11YDR228C ISW1P38144 1129 aa4.06□□□□□ -1.76
PCF11YDR228C ALG14P38242 237 aa4.06□□□□□ -1.76
PCF11YDR228C PNP1Q05788 311 aa4.06□□□□□ -1.76
PCF11YDR228C MSN1P22148 382 aa4.05□□□□□ -1.76
PCF11YDR228C YIL165CP40446 119 aa4.05□□□□□ -1.76
PCF11YDR228C BOI1P38041 980 aaKnown RBP4.05□□□□□ -1.76
PCF11YDR228C AMN1P38285 549 aaPredicted RBP4.05□□□□□ -1.76
PCF11YDR228C BUD9P53226 547 aa4.05□□□□□ -1.76
PCF11YDR228C LSO1Q3E827 93 aa4.05□□□□□ -1.76
PCF11YDR228C SLP1Q12232 587 aa4.04□□□□□ -1.76
PCF11YDR228C PRY1P47032 299 aa4.03□□□□□ -1.76
PCF11YDR228C EMG1Q06287 252 aaKnown RBP4.03□□□□□ -1.76
PCF11YDR228C MCA1Q08601 432 aa4.03□□□□□ -1.76
PCF11YDR228C HXT8P40886 569 aa4.03□□□□□ -1.77
PCF11YDR228C AI3P03877 415 aa4.02□□□□□ -1.77
PCF11YDR228C RGD2P43556 714 aa4.02□□□□□ -1.77
PCF11YDR228C RRN6P32786 894 aa4.01□□□□□ -1.77
PCF11YDR228C TAT1P38085 619 aa4.01□□□□□ -1.77
PCF11YDR228C NTA1P40354 457 aa4.01□□□□□ -1.77
PCF11YDR228C LSB6P42951 607 aa4.01□□□□□ -1.77
PCF11YDR228C RSC2Q06488 889 aa4.01□□□□□ -1.77
PCF11YDR228C PGM1P33401 570 aaKnown RBP4.01□□□□□ -1.77
PCF11YDR228C BOL3P39724 118 aa4.01□□□□□ -1.77
PCF11YDR228C PPT1P53043 513 aa4.01□□□□□ -1.77
PCF11YDR228C YPL034WQ03083 165 aa4.01□□□□□ -1.77
PCF11YDR228C TY4B-PA0A0B7P3V8 1104 aa4□□□□□ -1.77
PCF11YDR228C SFA1P32771 386 aa4□□□□□ -1.77
PCF11YDR228C YBR287WP38355 427 aa4□□□□□ -1.77
PCF11YDR228C TY4A-HQ6Q5P6 413 aa4□□□□□ -1.77
PCF11YDR228C RPB10P22139 70 aa3.99□□□□□ -1.77
PCF11YDR228C RRM3P38766 723 aa3.99□□□□□ -1.77
PCF11YDR228C INP51P40559 946 aaKnown RBP3.99□□□□□ -1.77
PCF11YDR228C BIO5P53744 561 aaKnown RBP3.99□□□□□ -1.77
PCF11YDR228C SAC7P17121 654 aa3.98□□□□□ -1.77
PCF11YDR228C FIR1P40020 876 aa3.98□□□□□ -1.77
PCF11YDR228C GIP2P40036 548 aa3.98□□□□□ -1.77
PCF11YDR228C ARI1P53111 347 aaKnown RBP3.98□□□□□ -1.77
PCF11YDR228C GAS5Q08193 484 aa3.98□□□□□ -1.77
PCF11YDR228C SOG2Q08817 791 aa3.98□□□□□ -1.77
PCF11YDR228C TFA2P36145 328 aa3.98□□□□□ -1.77
PCF11YDR228C AIM46P38885 310 aa3.98□□□□□ -1.77
PCF11YDR228C ALD3P54114 506 aa3.98□□□□□ -1.77
PCF11YDR228C FUR4P05316 633 aaKnown RBP3.97□□□□□ -1.77
PCF11YDR228C HVG1P0CE11 249 aa3.97□□□□□ -1.77
PCF11YDR228C SUT1P53032 299 aaKnown RBP3.97□□□□□ -1.77
PCF11YDR228C GUP1P53154 560 aa3.97□□□□□ -1.77
PCF11YDR228C TIF6Q12522 245 aaKnown RBP3.97□□□□□ -1.77
PCF11YDR228C SBP1P10080 294 aaKnown RBP3.96□□□□□ -1.77
PCF11YDR228C FUS1P11710 512 aa3.96□□□□□ -1.77
PCF11YDR228C SMC1P32908 1225 aa3.96□□□□□ -1.77
PCF11YDR228C IRS4P36115 615 aaKnown RBP3.96□□□□□ -1.77
PCF11YDR228C TED1P40533 473 aa3.96□□□□□ -1.77
PCF11YDR228C LEM3P42838 414 aa3.96□□□□□ -1.77
PCF11YDR228C SOK2P53438 785 aaPredicted RBP3.96□□□□□ -1.77
PCF11YDR228C TY1A-NL1Q12391 440 aaKnown RBP3.96□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 75.2 ms