RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W QCR6P00127 147 aa6.75□□□□□ -1.33
VMS1YDR049W PIF1P07271 859 aa6.75□□□□□ -1.33
VMS1YDR049W SRS2P12954 1174 aa6.75□□□□□ -1.33
VMS1YDR049W ARG8P18544 423 aa6.75□□□□□ -1.33
VMS1YDR049W PTC3P34221 468 aaKnown RBP6.75□□□□□ -1.33
VMS1YDR049W PTC4P38089 393 aa6.75□□□□□ -1.33
VMS1YDR049W CTF4Q01454 927 aa6.75□□□□□ -1.33
VMS1YDR049W SPT2P06843 333 aaPredicted RBP6.74□□□□□ -1.33
VMS1YDR049W YJU3P28321 313 aa6.74□□□□□ -1.33
VMS1YDR049W HIR1P32479 840 aa6.74□□□□□ -1.33
VMS1YDR049W CHZ1P40019 153 aaPredicted RBP6.74□□□□□ -1.33
VMS1YDR049W CYB2P00175 591 aa6.73□□□□□ -1.33
VMS1YDR049W FUR4P05316 633 aaKnown RBP6.73□□□□□ -1.33
VMS1YDR049W SCJ1P25303 377 aa6.73□□□□□ -1.33
VMS1YDR049W THI4P32318 326 aa6.73□□□□□ -1.33
VMS1YDR049W RPT1P33299 467 aaKnown RBP6.73□□□□□ -1.33
VMS1YDR049W YKL222CP35995 705 aa6.73□□□□□ -1.33
VMS1YDR049W MTR4P47047 1073 aaKnown RBP6.73□□□□□ -1.33
VMS1YDR049W CWC24P53769 259 aa6.73□□□□□ -1.33
VMS1YDR049W ADR1P07248 1323 aa6.73□□□□□ -1.33
VMS1YDR049W BRF1P29056 596 aa6.73□□□□□ -1.33
VMS1YDR049W PRE3P38624 215 aa6.73□□□□□ -1.33
VMS1YDR049W YEL023CP39992 682 aa6.73□□□□□ -1.33
VMS1YDR049W FOX2Q02207 900 aaKnown RBP6.73□□□□□ -1.33
VMS1YDR049W SND1Q04007 877 aa6.73□□□□□ -1.33
VMS1YDR049W TMA17Q12513 150 aa6.73□□□□□ -1.33
VMS1YDR049W CLB5P30283 435 aa6.72□□□□□ -1.33
VMS1YDR049W PEP7P32609 515 aa6.72□□□□□ -1.33
VMS1YDR049W ORC6P38826 435 aa6.72□□□□□ -1.33
VMS1YDR049W TAF1P46677 1066 aa6.72□□□□□ -1.33
VMS1YDR049W GPI8P49018 411 aa6.72□□□□□ -1.33
VMS1YDR049W PRP3Q03338 469 aaPredicted RBP6.72□□□□□ -1.33
VMS1YDR049W PPH3P32345 308 aa6.71□□□□□ -1.34
VMS1YDR049W MNR2P35724 969 aa6.71□□□□□ -1.34
VMS1YDR049W MEP1P40260 492 aa6.71□□□□□ -1.34
VMS1YDR049W SRP1Q02821 542 aaKnown RBP6.71□□□□□ -1.34
VMS1YDR049W PHM6Q05637 104 aa6.71□□□□□ -1.34
VMS1YDR049W YEF3P16521 1044 aaKnown RBP6.7□□□□□ -1.34
VMS1YDR049W SRB7P47822 140 aa6.7□□□□□ -1.34
VMS1YDR049W YDR341CQ05506 607 aaKnown RBP6.7□□□□□ -1.34
VMS1YDR049W VIP1Q06685 1146 aaKnown RBP6.7□□□□□ -1.34
VMS1YDR049W HSP42Q12329 375 aa6.7□□□□□ -1.34
VMS1YDR049W CIT1P00890 479 aa6.7□□□□□ -1.34
VMS1YDR049W PHO4P07270 312 aaKnown RBP6.7□□□□□ -1.34
VMS1YDR049W APL2P36000 726 aaPredicted RBP6.7□□□□□ -1.34
VMS1YDR049W NIT1P40447 199 aa6.7□□□□□ -1.34
VMS1YDR049W YJR120WP47157 116 aa6.7□□□□□ -1.34
VMS1YDR049W PRP43P53131 767 aaKnown RBP6.7□□□□□ -1.34
VMS1YDR049W PGI1P12709 554 aaKnown RBP6.69□□□□□ -1.34
VMS1YDR049W RGR1P19263 1082 aa6.69□□□□□ -1.34
VMS1YDR049W PET112P33893 541 aa6.69□□□□□ -1.34
VMS1YDR049W SAS3P34218 831 aa6.69□□□□□ -1.34
VMS1YDR049W TIM54P47045 478 aa6.69□□□□□ -1.34
VMS1YDR049W UBX4P54730 416 aa6.69□□□□□ -1.34
VMS1YDR049W IRC3Q06683 689 aa6.69□□□□□ -1.34
VMS1YDR049W SPS1P08458 490 aa6.68□□□□□ -1.34
VMS1YDR049W MSH2P25847 964 aa6.68□□□□□ -1.34
VMS1YDR049W SSH4P32343 579 aa6.68□□□□□ -1.34
VMS1YDR049W PEX6P33760 1030 aa6.68□□□□□ -1.34
VMS1YDR049W RPS26AP39938 119 aaKnown RBP6.68□□□□□ -1.34
VMS1YDR049W RPS26BP39939 119 aaKnown RBP6.68□□□□□ -1.34
VMS1YDR049W BFA1P47113 574 aa6.68□□□□□ -1.34
VMS1YDR049W YLR257WQ06146 321 aaKnown RBP6.68□□□□□ -1.34
VMS1YDR049W RPL8AP17076 256 aaKnown RBP6.68□□□□□ -1.34
VMS1YDR049W RAD54P32863 898 aa6.68□□□□□ -1.34
VMS1YDR049W PCS60P38137 543 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
VMS1YDR049W YHR020WP38708 688 aaKnown RBP6.68□□□□□ -1.34
VMS1YDR049W APE4P38821 490 aa6.68□□□□□ -1.34
VMS1YDR049W PLP2Q12017 286 aa6.68□□□□□ -1.34
VMS1YDR049W ANP1P32629 500 aa6.67□□□□□ -1.34
VMS1YDR049W RRN3P36070 627 aa6.67□□□□□ -1.34
VMS1YDR049W RSC30P38781 883 aa6.67□□□□□ -1.34
VMS1YDR049W DOT6P40059 670 aaKnown RBP6.67□□□□□ -1.34
VMS1YDR049W NDE1P40215 560 aa6.67□□□□□ -1.34
VMS1YDR049W SEC27P41811 889 aaKnown RBP6.67□□□□□ -1.34
VMS1YDR049W NAN1Q02931 896 aaKnown RBP6.67□□□□□ -1.34
VMS1YDR049W GPI13Q07830 1017 aa6.67□□□□□ -1.34
VMS1YDR049W REC8Q12188 680 aa6.67□□□□□ -1.34
VMS1YDR049W MCM16Q12262 181 aa6.67□□□□□ -1.34
VMS1YDR049W GPP1P41277 250 aaKnown RBP6.66□□□□□ -1.34
VMS1YDR049W PUN1Q06991 263 aa6.66□□□□□ -1.34
VMS1YDR049W CDC31P06704 161 aaKnown RBP6.66□□□□□ -1.34
VMS1YDR049W HOM3P10869 527 aa6.66□□□□□ -1.34
VMS1YDR049W PHO87P25360 923 aa6.66□□□□□ -1.34
VMS1YDR049W GFD2P25370 566 aaKnown RBP6.66□□□□□ -1.34
VMS1YDR049W YGR237CP50089 785 aa6.66□□□□□ -1.34
VMS1YDR049W RSC1P53236 928 aa6.66□□□□□ -1.34
VMS1YDR049W YLR352WQ06479 807 aa6.66□□□□□ -1.34
VMS1YDR049W MRS6P32864 603 aaKnown RBP6.65□□□□□ -1.34
VMS1YDR049W DJP1P40564 432 aa6.65□□□□□ -1.34
VMS1YDR049W NAF1P53919 492 aaKnown RBP6.65□□□□□ -1.34
VMS1YDR049W YNL058CP53947 316 aa6.65□□□□□ -1.34
VMS1YDR049W TGL2P54857 326 aa6.65□□□□□ -1.34
VMS1YDR049W PSR1Q07800 427 aa6.65□□□□□ -1.34
VMS1YDR049W ENV9Q08651 330 aa6.65□□□□□ -1.34
VMS1YDR049W FLC1Q08967 793 aa6.65□□□□□ -1.34
VMS1YDR049W GRE2Q12068 342 aaKnown RBP6.65□□□□□ -1.34
VMS1YDR049W TCB1Q12466 1186 aa6.65□□□□□ -1.34
VMS1YDR049W HSP82P02829 709 aaKnown RBP6.64□□□□□ -1.35
VMS1YDR049W ERR1P0CX10 437 aa6.64□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 62.8 ms