RNA–Protein interactions for RNA: YDL194W

SNF3, Transcript of Plasma membrane low glucose sensor, regulates glucose transport, yeastyeast

Gene SNF3, Length 2,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF3YDL194W ARV1Q06541 321 aa5.66□□□□□ -1.5
SNF3YDL194W ISA1Q07821 250 aaPredicted RBP5.66□□□□□ -1.5
SNF3YDL194W YPR204WQ08995 1032 aa5.66□□□□□ -1.5
SNF3YDL194W GLE1Q12315 538 aa5.66□□□□□ -1.5
SNF3YDL194W WHI5Q12416 295 aa5.66□□□□□ -1.5
SNF3YDL194W ERP5P38819 212 aa5.66□□□□□ -1.5
SNF3YDL194W IRR1P40541 1150 aa5.66□□□□□ -1.5
SNF3YDL194W BUD27P43573 796 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
SNF3YDL194W YJR107WP47145 328 aa5.66□□□□□ -1.5
SNF3YDL194W UTP13Q05946 817 aaKnown RBP5.66□□□□□ -1.5
SNF3YDL194W TUF1P02992 437 aaKnown RBP5.65□□□□□ -1.5
SNF3YDL194W ATP4P05626 244 aa5.65□□□□□ -1.5
SNF3YDL194W PSE1P32337 1089 aaKnown RBP5.65□□□□□ -1.5
SNF3YDL194W ETP1P38748 585 aaKnown RBP5.65□□□□□ -1.5
SNF3YDL194W EMP47P43555 445 aa5.65□□□□□ -1.5
SNF3YDL194W TEA1P47988 759 aa5.65□□□□□ -1.5
SNF3YDL194W DSL1P53847 754 aa5.65□□□□□ -1.5
SNF3YDL194W FAP1P53971 965 aa5.65□□□□□ -1.5
SNF3YDL194W REX2P54964 269 aaKnown RBP5.65□□□□□ -1.5
SNF3YDL194W BMS1Q08965 1183 aaKnown RBP5.65□□□□□ -1.5
SNF3YDL194W NSR1P27476 414 aaKnown RBP RIP-Chip data5.65□□□□□ -1.51not detected
SNF3YDL194W SMY2P32909 740 aaKnown RBP5.65□□□□□ -1.51
SNF3YDL194W YKL100CP34248 587 aa5.65□□□□□ -1.51
SNF3YDL194W BFR1P38934 470 aaKnown RBP RIP-Chip data5.65□□□□□ -1.51not detected
SNF3YDL194W BTN2P53286 410 aa5.65□□□□□ -1.51
SNF3YDL194W ALD6P54115 500 aaKnown RBP5.65□□□□□ -1.51
SNF3YDL194W MSB4Q12317 492 aa5.65□□□□□ -1.51
SNF3YDL194W DPH6Q12429 685 aa5.65□□□□□ -1.51
SNF3YDL194W MRPL25P23369 157 aa5.64□□□□□ -1.51
SNF3YDL194W PEP12P32854 288 aa5.64□□□□□ -1.51
SNF3YDL194W ARB1P40024 610 aaKnown RBP5.64□□□□□ -1.51
SNF3YDL194W GCD10P41814 478 aa5.64□□□□□ -1.51
SNF3YDL194W TRS33Q99394 268 aa5.64□□□□□ -1.51
SNF3YDL194W CLN1P20437 546 aa5.64□□□□□ -1.51
SNF3YDL194W YHL050CP38721 697 aa5.64□□□□□ -1.51
SNF3YDL194W YHR219WP38900 624 aa5.64□□□□□ -1.51
SNF3YDL194W DBP9Q06218 594 aaKnown RBP5.64□□□□□ -1.51
SNF3YDL194W YEL077CQ3E7X8 1277 aa5.64□□□□□ -1.51
SNF3YDL194W KAR3P17119 729 aa5.63□□□□□ -1.51
SNF3YDL194W HNM1P19807 563 aa5.63□□□□□ -1.51
SNF3YDL194W RAD33Q04231 177 aa5.63□□□□□ -1.51
SNF3YDL194W APC2Q12440 853 aa5.63□□□□□ -1.51
SNF3YDL194W TRL1P09880 827 aaKnown RBP5.63□□□□□ -1.51
SNF3YDL194W SMY1P32364 656 aaKnown RBP5.63□□□□□ -1.51
SNF3YDL194W YKL222CP35995 705 aa5.63□□□□□ -1.51
SNF3YDL194W NOP4P37838 685 aaKnown RBP5.63□□□□□ -1.51
SNF3YDL194W RTG3P38165 486 aa5.63□□□□□ -1.51
SNF3YDL194W CRP1P38845 465 aaKnown RBP5.63□□□□□ -1.51
SNF3YDL194W GTT3P39996 337 aa5.63□□□□□ -1.51
SNF3YDL194W NDE1P40215 560 aa5.63□□□□□ -1.51
SNF3YDL194W SPP382Q06411 708 aaPredicted RBP5.63□□□□□ -1.51
SNF3YDL194W TPD3P31383 635 aa5.62□□□□□ -1.51
SNF3YDL194W RPC82P32349 654 aa5.62□□□□□ -1.51
SNF3YDL194W ATP22P50273 684 aaPredicted RBP5.62□□□□□ -1.51
SNF3YDL194W TAP42Q04372 366 aa5.62□□□□□ -1.51
SNF3YDL194W YDR286CQ05530 114 aa5.62□□□□□ -1.51
SNF3YDL194W CDC53Q12018 815 aaKnown RBP5.62□□□□□ -1.51
SNF3YDL194W MNL2Q12205 849 aa5.62□□□□□ -1.51
SNF3YDL194W NFI1Q12216 726 aa5.62□□□□□ -1.51
SNF3YDL194W SEC23P15303 768 aaKnown RBP5.62□□□□□ -1.51
SNF3YDL194W YKL050CP35736 922 aa5.62□□□□□ -1.51
SNF3YDL194W KDX1P36005 433 aa5.62□□□□□ -1.51
SNF3YDL194W BOI1P38041 980 aaKnown RBP5.62□□□□□ -1.51
SNF3YDL194W OTU2P38747 307 aaKnown RBP5.62□□□□□ -1.51
SNF3YDL194W SWD1P39706 426 aa5.62□□□□□ -1.51
SNF3YDL194W COG8Q04632 607 aa5.62□□□□□ -1.51
SNF3YDL194W AOS1Q06624 347 aa5.62□□□□□ -1.51
SNF3YDL194W MPC54Q08550 464 aa5.62□□□□□ -1.51
SNF3YDL194W PGC1Q08959 321 aa5.62□□□□□ -1.51
SNF3YDL194W MER1P16523 270 aa5.61□□□□□ -1.51
SNF3YDL194W SHE10P53075 577 aa5.61□□□□□ -1.51
SNF3YDL194W ZDS2P54786 942 aa5.61□□□□□ -1.51
SNF3YDL194W SWA2Q06677 668 aa5.61□□□□□ -1.51
SNF3YDL194W MDM38Q08179 573 aa5.61□□□□□ -1.51
SNF3YDL194W RRP36Q12481 300 aaPredicted RBP5.61□□□□□ -1.51
SNF3YDL194W YER034WP40022 185 aaKnown RBP5.61□□□□□ -1.51
SNF3YDL194W DAS1P47005 663 aa5.61□□□□□ -1.51
SNF3YDL194W ERO1Q03103 563 aa5.61□□□□□ -1.51
SNF3YDL194W VPS16Q03308 798 aa5.61□□□□□ -1.51
SNF3YDL194W CWC21Q03375 135 aaKnown RBP5.61□□□□□ -1.51
SNF3YDL194W PIN2Q12057 282 aa5.61□□□□□ -1.51
SNF3YDL194W YEF3P16521 1044 aaKnown RBP5.61□□□□□ -1.51
SNF3YDL194W DAL80P26343 269 aa5.61□□□□□ -1.51
SNF3YDL194W MRE11P32829 692 aa5.61□□□□□ -1.51
SNF3YDL194W CCT3P39077 534 aaKnown RBP5.61□□□□□ -1.51
SNF3YDL194W RIC1P40395 1056 aa5.61□□□□□ -1.51
SNF3YDL194W SAP185P40856 1058 aa5.61□□□□□ -1.51
SNF3YDL194W CSN12P47130 423 aa5.61□□□□□ -1.51
SNF3YDL194W CCM1P48237 864 aaPredicted RBP5.61□□□□□ -1.51
SNF3YDL194W HOP2P53187 214 aa5.61□□□□□ -1.51
SNF3YDL194W SPC19Q03954 165 aa5.61□□□□□ -1.51
SNF3YDL194W PPM2Q08282 695 aa5.61□□□□□ -1.51
SNF3YDL194W YOR131CQ12486 218 aa5.61□□□□□ -1.51
SNF3YDL194W TMA7Q3E764 64 aaKnown RBP5.61□□□□□ -1.51
SNF3YDL194W RGP1P16664 663 aa5.6□□□□□ -1.51
SNF3YDL194W MSH3P25336 1018 aa5.6□□□□□ -1.51
SNF3YDL194W PGS1P25578 521 aa5.6□□□□□ -1.51
SNF3YDL194W RPG1P38249 964 aaKnown RBP5.6□□□□□ -1.51
SNF3YDL194W VTC2P43585 828 aa5.6□□□□□ -1.51
SNF3YDL194W LAP3Q01532 483 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms