RNA–Protein interactions for RNA: YCR005C

CIT2, Transcript of Citrate synthase, yeastyeast

Gene CIT2, Length 1,383 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT2YCR005C SIT4P20604 311 aa8.86□□□□□ -0.99
CIT2YCR005C GUA1P38625 525 aaKnown RBP8.86□□□□□ -0.99
CIT2YCR005C FPK1P53739 893 aa8.86□□□□□ -0.99
CIT2YCR005C COQ4O13525 335 aa8.86□□□□□ -0.99
CIT2YCR005C RAD2P07276 1031 aa8.86□□□□□ -0.99
CIT2YCR005C NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.86□□□□□ -0.99not detected
CIT2YCR005C YML082WQ04533 649 aaKnown RBP8.86□□□□□ -0.99
CIT2YCR005C NPR2P39923 615 aa8.85□□□□□ -0.99
CIT2YCR005C MDG1P53885 366 aa8.85□□□□□ -0.99
CIT2YCR005C MMP1Q12372 583 aa8.85□□□□□ -0.99
CIT2YCR005C BUD27P43573 796 aaKnown RBP RIP-Chip data8.84□□□□□ -0.99not detected
CIT2YCR005C YNL115CP53925 644 aa8.84□□□□□ -0.99
CIT2YCR005C SRT1Q03175 343 aa8.84□□□□□ -0.99
CIT2YCR005C RAD4P14736 754 aa8.83□□□□□ -1
CIT2YCR005C DAL5P15365 543 aa8.83□□□□□ -1
CIT2YCR005C FUN12P39730 1002 aaKnown RBP8.83□□□□□ -1
CIT2YCR005C FPR3P38911 411 aaKnown RBP8.82□□□□□ -1
CIT2YCR005C ALD2P47771 506 aa8.82□□□□□ -1
CIT2YCR005C DMA2P53924 522 aa8.82□□□□□ -1
CIT2YCR005C YOL057WQ08225 711 aa8.82□□□□□ -1
CIT2YCR005C NOP8Q08287 484 aaPredicted RBP8.82□□□□□ -1
CIT2YCR005C SSP2Q08646 371 aa8.82□□□□□ -1
CIT2YCR005C BUG1Q12191 341 aa8.82□□□□□ -1
CIT2YCR005C PDR1P12383 1068 aa8.8□□□□□ -1
CIT2YCR005C LYS4P49367 693 aaPredicted RBP8.8□□□□□ -1
CIT2YCR005C VPS64Q03944 604 aa8.8□□□□□ -1
CIT2YCR005C PAT1P25644 796 aaKnown RBP8.79□□□□□ -1
CIT2YCR005C UGA2P38067 497 aa8.79□□□□□ -1
CIT2YCR005C YIL092WP40497 633 aa8.79□□□□□ -1
CIT2YCR005C DNM1P54861 757 aa8.79□□□□□ -1
CIT2YCR005C PHM7Q12252 991 aa8.78□□□□□ -1
CIT2YCR005C MRP7P12687 371 aa8.77□□□□□ -1.01
CIT2YCR005C SLY41P22215 453 aa8.77□□□□□ -1.01
CIT2YCR005C GCD11P32481 527 aaKnown RBP8.77□□□□□ -1.01
CIT2YCR005C SER1P33330 395 aaKnown RBP8.77□□□□□ -1.01
CIT2YCR005C YBL086CP38177 466 aa8.77□□□□□ -1.01
CIT2YCR005C YPP1P46951 817 aa8.77□□□□□ -1.01
CIT2YCR005C ZDS2P54786 942 aa8.77□□□□□ -1.01
CIT2YCR005C SAS4Q04003 481 aa8.77□□□□□ -1.01
CIT2YCR005C ALD3P54114 506 aa8.76□□□□□ -1.01
CIT2YCR005C YDR344CQ05510 147 aa8.76□□□□□ -1.01
CIT2YCR005C PRT1P06103 763 aaKnown RBP8.75□□□□□ -1.01
CIT2YCR005C NUP133P36161 1157 aa8.75□□□□□ -1.01
CIT2YCR005C CST6P40535 587 aa8.75□□□□□ -1.01
CIT2YCR005C UTP22P53254 1237 aaPredicted RBP8.75□□□□□ -1.01
CIT2YCR005C STR2P47164 639 aa8.74□□□□□ -1.01
CIT2YCR005C ISM1P48526 1002 aa8.74□□□□□ -1.01
CIT2YCR005C YGL082WP53155 381 aa8.74□□□□□ -1.01
CIT2YCR005C TFB3Q03290 321 aa8.74□□□□□ -1.01
CIT2YCR005C PKH1Q03407 766 aa8.74□□□□□ -1.01
CIT2YCR005C KEX2P13134 814 aa8.73□□□□□ -1.01
CIT2YCR005C RAM1P22007 431 aa8.73□□□□□ -1.01
CIT2YCR005C APL2P36000 726 aaPredicted RBP8.73□□□□□ -1.01
CIT2YCR005C TBF1Q02457 562 aa8.73□□□□□ -1.01
CIT2YCR005C PKH3Q03306 898 aaPredicted RBP8.73□□□□□ -1.01
CIT2YCR005C CSI1Q04368 295 aa8.73□□□□□ -1.01
CIT2YCR005C YDR306CQ06640 478 aa8.73□□□□□ -1.01
CIT2YCR005C TYW1Q08960 810 aaKnown RBP8.73□□□□□ -1.01
CIT2YCR005C NYV1Q12255 253 aa8.73□□□□□ -1.01
CIT2YCR005C RAD24P32641 659 aa8.72□□□□□ -1.01
CIT2YCR005C CTH1P47976 325 aa8.72□□□□□ -1.01
CIT2YCR005C PUS6P53294 404 aa8.72□□□□□ -1.01
CIT2YCR005C GYP1Q08484 637 aa8.72□□□□□ -1.01
CIT2YCR005C SWI1P09547 1314 aa8.71□□□□□ -1.02
CIT2YCR005C LPD1P09624 499 aaKnown RBP8.71□□□□□ -1.02
CIT2YCR005C ESS1P22696 170 aa8.71□□□□□ -1.02
CIT2YCR005C KTR1P27810 393 aaKnown RBP8.71□□□□□ -1.02
CIT2YCR005C YNG2P38806 282 aaKnown RBP8.71□□□□□ -1.02
CIT2YCR005C YGR122WP53272 402 aa8.71□□□□□ -1.02
CIT2YCR005C PUF6Q04373 656 aaKnown RBP8.71□□□□□ -1.02
CIT2YCR005C BUD20Q08004 166 aaPredicted RBP8.71□□□□□ -1.02
CIT2YCR005C RPS19AP07280 144 aaKnown RBP8.7□□□□□ -1.02
CIT2YCR005C RPS19BP07281 144 aaPredicted RBP8.7□□□□□ -1.02
CIT2YCR005C ARG8P18544 423 aa8.7□□□□□ -1.02
CIT2YCR005C MRF1P30775 413 aaPredicted RBP8.7□□□□□ -1.02
CIT2YCR005C POL32P47110 350 aa8.7□□□□□ -1.02
CIT2YCR005C RAT1Q02792 1006 aaKnown RBP8.7□□□□□ -1.02
CIT2YCR005C YPR204WQ08995 1032 aa8.7□□□□□ -1.02
CIT2YCR005C SUP35P05453 685 aaKnown RBP8.69□□□□□ -1.02
CIT2YCR005C SCJ1P25303 377 aa8.69□□□□□ -1.02
CIT2YCR005C SPT16P32558 1035 aaKnown RBP8.69□□□□□ -1.02
CIT2YCR005C BCK2P33306 851 aa8.69□□□□□ -1.02
CIT2YCR005C VRP1P37370 817 aa8.69□□□□□ -1.02
CIT2YCR005C CTI6Q08923 506 aa8.69□□□□□ -1.02
CIT2YCR005C RAD59Q12223 238 aa8.69□□□□□ -1.02
CIT2YCR005C UTP10P42945 1769 aaKnown RBP8.69□□□□□ -1.02
CIT2YCR005C SWC3P31376 625 aa8.68□□□□□ -1.02
CIT2YCR005C BOI2P39969 1040 aa8.68□□□□□ -1.02
CIT2YCR005C YJR008WP47085 338 aa8.68□□□□□ -1.02
CIT2YCR005C SPO1P53541 631 aa8.68□□□□□ -1.02
CIT2YCR005C YBL036CP38197 257 aa8.67□□□□□ -1.02
CIT2YCR005C DIB1Q06819 143 aaPredicted RBP8.67□□□□□ -1.02
CIT2YCR005C TOS1P38288 455 aa8.66□□□□□ -1.02
CIT2YCR005C HAT1Q12341 374 aa8.66□□□□□ -1.02
CIT2YCR005C UBP12P39538 1254 aa8.65□□□□□ -1.02
CIT2YCR005C RIX7Q07844 837 aaKnown RBP8.65□□□□□ -1.02
CIT2YCR005C PSH1Q12161 406 aa8.65□□□□□ -1.02
CIT2YCR005C YPR015CQ12531 247 aa8.65□□□□□ -1.02
CIT2YCR005C TRM1P15565 570 aaKnown RBP8.64□□□□□ -1.03
CIT2YCR005C ITC1P53125 1264 aa8.64□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms