RNA–Protein interactions for RNA: YCL074W

YCL074W, Transcript of Pseudogene: encodes fragment of Ty Pol protein, yeast

Gene YCL074W, Length 927 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCL074W	YCL074W	ELG1	Q12050	791 aa		11.93	□□□□□ -0.5
YCL074W	YCL074W	YHL017W	P38745	532 aa		11.92	□□□□□ -0.5
YCL074W	YCL074W	YNL193W	P53870	558 aa		11.92	□□□□□ -0.5
YCL074W	YCL074W	CPA2	P03965	1118 aa	Known RBP	11.91	□□□□□ -0.5
YCL074W	YCL074W	PRP40	P33203	583 aa	Known RBP	11.91	□□□□□ -0.5
YCL074W	YCL074W	VID28	P40547	921 aa		11.91	□□□□□ -0.5
YCL074W	YCL074W	TCB2	P48231	1178 aa		11.91	□□□□□ -0.5
YCL074W	YCL074W	YKE2	P52553	114 aa		11.91	□□□□□ -0.5
YCL074W	YCL074W	YPL150W	Q12152	901 aa		11.91	□□□□□ -0.5
YCL074W	YCL074W	MSB4	Q12317	492 aa		11.91	□□□□□ -0.5
YCL074W	YCL074W	HAT1	Q12341	374 aa		11.91	□□□□□ -0.5
YCL074W	YCL074W	ADR1	P07248	1323 aa		11.9	□□□□□ -0.5
YCL074W	YCL074W	SIS2	P36024	562 aa		11.9	□□□□□ -0.5
YCL074W	YCL074W	NYV1	Q12255	253 aa		11.9	□□□□□ -0.5
YCL074W	YCL074W	RRI2	Q12348	645 aa		11.9	□□□□□ -0.5
YCL074W	YCL074W	PGA3	Q12746	312 aa	Known RBP	11.9	□□□□□ -0.5
YCL074W	YCL074W	PIF1	P07271	859 aa		11.89	□□□□□ -0.51
YCL074W	YCL074W	PEP3	P27801	918 aa		11.89	□□□□□ -0.51
YCL074W	YCL074W	ENT3	P47160	408 aa		11.89	□□□□□ -0.51
YCL074W	YCL074W	ENP2	P48234	707 aa	Known RBP	11.89	□□□□□ -0.51
YCL074W	YCL074W	GRE2	Q12068	342 aa	Known RBP	11.89	□□□□□ -0.51
YCL074W	YCL074W	MATALPHA2	P0CY08	210 aa		11.88	□□□□□ -0.51
YCL074W	YCL074W	HMLALPHA2	P0CY09	210 aa		11.88	□□□□□ -0.51
YCL074W	YCL074W	MCM2	P29469	868 aa		11.88	□□□□□ -0.51
YCL074W	YCL074W	EBP2	P36049	427 aa	Known RBP	11.88	□□□□□ -0.51
YCL074W	YCL074W	MRPL10	P36520	322 aa		11.88	□□□□□ -0.51
YCL074W	YCL074W	BBC1	P47068	1157 aa		11.88	□□□□□ -0.51
YCL074W	YCL074W	ESF1	Q06344	628 aa	Known RBP	11.88	□□□□□ -0.51
YCL074W	YCL074W	FRS2	P15625	503 aa	Known RBP	11.87	□□□□□ -0.51
YCL074W	YCL074W	MBR1	P23493	339 aa		11.87	□□□□□ -0.51
YCL074W	YCL074W	FBP26	P32604	452 aa		11.87	□□□□□ -0.51
YCL074W	YCL074W	YJL181W	P46987	611 aa		11.87	□□□□□ -0.51
YCL074W	YCL074W	ESC2	Q06340	456 aa		11.87	□□□□□ -0.51
YCL074W	YCL074W	SSF2	Q12153	453 aa	Predicted RBP	11.87	□□□□□ -0.51
YCL074W	YCL074W	POM152	P39685	1337 aa		11.86	□□□□□ -0.51
YCL074W	YCL074W	RDS1	P25611	832 aa		11.86	□□□□□ -0.51
YCL074W	YCL074W	IMP2'	P32351	346 aa		11.86	□□□□□ -0.51
YCL074W	YCL074W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	11.86	□□□□□ -0.51	not detected
YCL074W	YCL074W	NPR3	P38742	1146 aa		11.86	□□□□□ -0.51
YCL074W	YCL074W	YMR147W	P40218	223 aa	Known RBP	11.86	□□□□□ -0.51
YCL074W	YCL074W	BUD6	P41697	788 aa		11.86	□□□□□ -0.51
YCL074W	YCL074W	DDP1	Q99321	188 aa	Known RBP	11.86	□□□□□ -0.51
YCL074W	YCL074W	LAM4	P38800	1345 aa		11.86	□□□□□ -0.51
YCL074W	YCL074W	MET1	P36150	593 aa		11.85	□□□□□ -0.51
YCL074W	YCL074W	YFR006W	P43590	535 aa		11.85	□□□□□ -0.51
YCL074W	YCL074W	PKH3	Q03306	898 aa	Predicted RBP	11.85	□□□□□ -0.51
YCL074W	YCL074W	TAH18	Q12181	623 aa		11.85	□□□□□ -0.51
YCL074W	YCL074W	MPE1	P35728	441 aa	Known RBP	11.84	□□□□□ -0.51
YCL074W	YCL074W	MAL33	P38157	468 aa		11.84	□□□□□ -0.51
YCL074W	YCL074W	RFC5	P38251	354 aa		11.83	□□□□□ -0.52
YCL074W	YCL074W	UBP10	P53874	792 aa	Predicted RBP	11.83	□□□□□ -0.52
YCL074W	YCL074W	SGD1	Q06132	899 aa		11.83	□□□□□ -0.52
YCL074W	YCL074W	TRS33	Q99394	268 aa		11.83	□□□□□ -0.52
YCL074W	YCL074W	HAL5	P38970	855 aa	Known RBP	11.82	□□□□□ -0.52
YCL074W	YCL074W	ECM23	Q02710	187 aa		11.82	□□□□□ -0.52
YCL074W	YCL074W	RAT1	Q02792	1006 aa	Known RBP	11.82	□□□□□ -0.52
YCL074W	YCL074W	YLR407W	Q06070	228 aa		11.82	□□□□□ -0.52
YCL074W	YCL074W	NGR1	P32831	672 aa	Known RBP	11.81	□□□□□ -0.52
YCL074W	YCL074W	CRG1	P38892	291 aa	RIP-Chip data	11.81	□□□□□ -0.52	not detected
YCL074W	YCL074W	RPN11	P43588	306 aa	Known RBP	11.81	□□□□□ -0.52
YCL074W	YCL074W	SRC1	Q03707	834 aa		11.81	□□□□□ -0.52
YCL074W	YCL074W	CYC8	P14922	966 aa		11.8	□□□□□ -0.52
YCL074W	YCL074W	ATE1	P16639	503 aa		11.8	□□□□□ -0.52
YCL074W	YCL074W	YIL055C	P40523	627 aa	Known RBP	11.8	□□□□□ -0.52
YCL074W	YCL074W	KAR5	Q04746	504 aa		11.8	□□□□□ -0.52
YCL074W	YCL074W	SPN1	Q06505	410 aa	Predicted RBP	11.8	□□□□□ -0.52
YCL074W	YCL074W	NOP58	Q12499	511 aa	Known RBP	11.8	□□□□□ -0.52
YCL074W	YCL074W	PGI1	P12709	554 aa	Known RBP	11.79	□□□□□ -0.52
YCL074W	YCL074W	NUG1	P40010	520 aa	Known RBP	11.79	□□□□□ -0.52
YCL074W	YCL074W	IRC8	P47046	822 aa		11.79	□□□□□ -0.52
YCL074W	YCL074W	DIB1	Q06819	143 aa	Predicted RBP	11.79	□□□□□ -0.52
YCL074W	YCL074W	SES1	P07284	462 aa	Known RBP	11.78	□□□□□ -0.52
YCL074W	YCL074W	MPH3	P0CE00	602 aa		11.78	□□□□□ -0.52
YCL074W	YCL074W	NPL4	P33755	580 aa		11.78	□□□□□ -0.52
YCL074W	YCL074W	RFT1	P38206	574 aa	Predicted RBP	11.78	□□□□□ -0.52
YCL074W	YCL074W	GLO3	P38682	493 aa	Known RBP	11.78	□□□□□ -0.52
YCL074W	YCL074W	RRM3	P38766	723 aa		11.78	□□□□□ -0.52
YCL074W	YCL074W	YPT11	P48559	417 aa		11.78	□□□□□ -0.52
YCL074W	YCL074W	SSL2	Q00578	843 aa		11.78	□□□□□ -0.52
YCL074W	YCL074W	BUG1	Q12191	341 aa		11.78	□□□□□ -0.52
YCL074W	YCL074W	GPA1	P08539	472 aa		11.77	□□□□□ -0.53
YCL074W	YCL074W	GEF1	P37020	779 aa		11.77	□□□□□ -0.53
YCL074W	YCL074W	RRP8	P38961	392 aa	Known RBP	11.77	□□□□□ -0.53
YCL074W	YCL074W	YER130C	P39959	443 aa		11.77	□□□□□ -0.53
YCL074W	YCL074W	ALD3	P54114	506 aa		11.77	□□□□□ -0.53
YCL074W	YCL074W	EST2	Q06163	884 aa		11.77	□□□□□ -0.53
YCL074W	YCL074W	THI3	Q07471	609 aa		11.77	□□□□□ -0.53
YCL074W	YCL074W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	11.76	□□□□□ -0.53	not detected
YCL074W	YCL074W	DIT2	P21595	489 aa		11.76	□□□□□ -0.53
YCL074W	YCL074W	YKT6	P36015	200 aa	Known RBP	11.76	□□□□□ -0.53
YCL074W	YCL074W	EPL1	P43572	832 aa		11.76	□□□□□ -0.53
YCL074W	YCL074W	IOC3	P43596	787 aa		11.76	□□□□□ -0.53
YCL074W	YCL074W	STU2	P46675	888 aa		11.76	□□□□□ -0.53
YCL074W	YCL074W	TIM50	Q02776	476 aa		11.76	□□□□□ -0.53
YCL074W	YCL074W	DPH6	Q12429	685 aa		11.76	□□□□□ -0.53
YCL074W	YCL074W	FAS2	P19097	1887 aa	Known RBP	11.75	□□□□□ -0.53
YCL074W	YCL074W	MGM1	P32266	881 aa		11.75	□□□□□ -0.53
YCL074W	YCL074W	RER2	P35196	286 aa		11.75	□□□□□ -0.53
YCL074W	YCL074W	PPM2	Q08282	695 aa		11.75	□□□□□ -0.53
YCL074W	YCL074W	CYB2	P00175	591 aa		11.74	□□□□□ -0.53

Retrieved 100 of 5,963 RNA–protein pairs in 245.7 ms