RNA–Protein interactions for RNA: YBR275C

RIF1, Transcript of Protein that binds to the Rap1p C-terminus, yeastyeast

Gene RIF1, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIF1YBR275C YIL055CP40523 627 aaKnown RBP3.26□□□□□ -1.89
RIF1YBR275C HRK1Q08732 759 aaKnown RBP3.26□□□□□ -1.89
RIF1YBR275C CLB2P24869 491 aa3.25□□□□□ -1.89
RIF1YBR275C YBL086CP38177 466 aa3.25□□□□□ -1.89
RIF1YBR275C DUS1P53759 423 aaKnown RBP3.25□□□□□ -1.89
RIF1YBR275C PRO2P54885 456 aaKnown RBP3.25□□□□□ -1.89
RIF1YBR275C PRT1P06103 763 aaKnown RBP3.25□□□□□ -1.89
RIF1YBR275C PSY4P38193 441 aa3.25□□□□□ -1.89
RIF1YBR275C SHE3P38272 425 aaKnown RBP3.25□□□□□ -1.89
RIF1YBR275C YHL044WP38727 235 aa3.25□□□□□ -1.89
RIF1YBR275C VMA13P41807 478 aaKnown RBP3.25□□□□□ -1.89
RIF1YBR275C YJR030CP47101 745 aa3.25□□□□□ -1.89
RIF1YBR275C GYP7P48365 746 aa3.25□□□□□ -1.89
RIF1YBR275C THI22Q06490 572 aa3.25□□□□□ -1.89
RIF1YBR275C SUP45P12385 437 aaKnown RBP3.25□□□□□ -1.89
RIF1YBR275C NOP12Q08208 459 aaKnown RBP3.25□□□□□ -1.89
RIF1YBR275C PLP2Q12017 286 aa3.25□□□□□ -1.89
RIF1YBR275C YCS4Q06156 1176 aa3.25□□□□□ -1.89
RIF1YBR275C YLR001CQ07895 862 aa3.25□□□□□ -1.89
RIF1YBR275C DTR1P38125 572 aa3.25□□□□□ -1.89
RIF1YBR275C ALG2P43636 503 aa3.25□□□□□ -1.89
RIF1YBR275C MAK10Q02197 733 aa3.25□□□□□ -1.89
RIF1YBR275C NOC3Q07896 663 aaPredicted RBP3.25□□□□□ -1.89
RIF1YBR275C MFT1P33441 392 aaKnown RBP3.24□□□□□ -1.89
RIF1YBR275C RRT6P53117 311 aaPredicted RBP3.24□□□□□ -1.89
RIF1YBR275C YDR338CQ05497 695 aa3.24□□□□□ -1.89
RIF1YBR275C RGA2Q06407 1009 aa3.24□□□□□ -1.89
RIF1YBR275C GIN4Q12263 1142 aa3.24□□□□□ -1.89
RIF1YBR275C AI4P03878 556 aa3.24□□□□□ -1.89
RIF1YBR275C ALG3P38179 458 aa3.24□□□□□ -1.89
RIF1YBR275C CAJ1P39101 391 aa3.24□□□□□ -1.89
RIF1YBR275C OCA1P50946 238 aaPredicted RBP3.24□□□□□ -1.89
RIF1YBR275C RMT2Q03305 412 aa3.24□□□□□ -1.89
RIF1YBR275C CTI6Q08923 506 aa3.24□□□□□ -1.89
RIF1YBR275C RPC82P32349 654 aa3.24□□□□□ -1.89
RIF1YBR275C UBX4P54730 416 aa3.24□□□□□ -1.89
RIF1YBR275C DIS3Q08162 1001 aaKnown RBP3.24□□□□□ -1.89
RIF1YBR275C CMR1Q12510 522 aaKnown RBP3.24□□□□□ -1.89
RIF1YBR275C GCD2P12754 651 aaPredicted RBP3.24□□□□□ -1.89
RIF1YBR275C ATE1P16639 503 aa3.24□□□□□ -1.89
RIF1YBR275C PDI1P17967 522 aaKnown RBP3.24□□□□□ -1.89
RIF1YBR275C CLB3P24870 427 aa3.24□□□□□ -1.89
RIF1YBR275C YKU70P32807 602 aa3.24□□□□□ -1.89
RIF1YBR275C PTC3P34221 468 aaKnown RBP3.24□□□□□ -1.89
RIF1YBR275C VPS21P36017 210 aaKnown RBP3.24□□□□□ -1.89
RIF1YBR275C TBS1P38114 1094 aa3.24□□□□□ -1.89
RIF1YBR275C PSP2P50109 593 aaKnown RBP3.24□□□□□ -1.89
RIF1YBR275C ATG23Q06671 453 aa3.24□□□□□ -1.89
RIF1YBR275C RRG1Q12167 365 aaPredicted RBP3.24□□□□□ -1.89
RIF1YBR275C SMC6Q12749 1114 aa3.24□□□□□ -1.89
RIF1YBR275C VPS3P23643 1011 aa3.23□□□□□ -1.89
RIF1YBR275C SEC21P32074 935 aaKnown RBP3.23□□□□□ -1.89
RIF1YBR275C RRP9Q06506 573 aaKnown RBP3.23□□□□□ -1.89
RIF1YBR275C SGT1Q08446 395 aa3.23□□□□□ -1.89
RIF1YBR275C CHD1P32657 1468 aa3.23□□□□□ -1.89
RIF1YBR275C SRP40P32583 406 aaPredicted RBP3.23□□□□□ -1.89
RIF1YBR275C CIT3P43635 486 aa3.23□□□□□ -1.89
RIF1YBR275C SCD6P45978 349 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
RIF1YBR275C SET2P46995 733 aaKnown RBP3.23□□□□□ -1.89
RIF1YBR275C GNT1Q12096 491 aa3.23□□□□□ -1.89
RIF1YBR275C TOA1P32773 286 aa3.23□□□□□ -1.89
RIF1YBR275C YKL222CP35995 705 aa3.23□□□□□ -1.89
RIF1YBR275C NUP60P39705 539 aa3.23□□□□□ -1.89
RIF1YBR275C CPR6P53691 371 aaKnown RBP3.23□□□□□ -1.89
RIF1YBR275C LPD1P09624 499 aaKnown RBP3.23□□□□□ -1.89
RIF1YBR275C RPL35AP0CX84 120 aaKnown RBP3.23□□□□□ -1.89
RIF1YBR275C RPL35BP0CX85 120 aaKnown RBP3.23□□□□□ -1.89
RIF1YBR275C BRN1P38170 754 aa3.23□□□□□ -1.89
RIF1YBR275C NNF2P53253 936 aa3.23□□□□□ -1.89
RIF1YBR275C CWC24P53769 259 aa3.23□□□□□ -1.89
RIF1YBR275C NAF1P53919 492 aaKnown RBP3.23□□□□□ -1.89
RIF1YBR275C TRS130Q03660 1102 aa3.23□□□□□ -1.89
RIF1YBR275C IOC4Q04213 475 aa3.23□□□□□ -1.89
RIF1YBR275C RNA1P11745 407 aaKnown RBP3.23□□□□□ -1.89
RIF1YBR275C SAC7P17121 654 aa3.23□□□□□ -1.89
RIF1YBR275C MRPL32P25348 183 aa3.23□□□□□ -1.89
RIF1YBR275C MDJ2P42834 146 aa3.23□□□□□ -1.89
RIF1YBR275C TY3A-GQ12173 290 aa3.23□□□□□ -1.89
RIF1YBR275C RTP1Q12751 981 aa3.23□□□□□ -1.89
RIF1YBR275C TY3A-IQ99219 290 aa3.23□□□□□ -1.89
RIF1YBR275C HSL1P34244 1518 aa3.22□□□□□ -1.89
RIF1YBR275C EBP2P36049 427 aaKnown RBP3.22□□□□□ -1.89
RIF1YBR275C PEX14P53112 341 aa3.22□□□□□ -1.89
RIF1YBR275C BIO5P53744 561 aaKnown RBP3.22□□□□□ -1.89
RIF1YBR275C CTF4Q01454 927 aa3.22□□□□□ -1.89
RIF1YBR275C CLB1P24868 471 aa3.22□□□□□ -1.89
RIF1YBR275C SAW1P39735 261 aa3.22□□□□□ -1.89
RIF1YBR275C FAU1P40099 211 aa3.22□□□□□ -1.89
RIF1YBR275C ADY4Q05955 493 aa3.22□□□□□ -1.89
RIF1YBR275C PGA3Q12746 312 aaKnown RBP3.22□□□□□ -1.89
RIF1YBR275C SSN2P38931 1420 aa3.22□□□□□ -1.89
RIF1YBR275C SSE1P32589 693 aaKnown RBP3.22□□□□□ -1.89
RIF1YBR275C NUG1P40010 520 aaKnown RBP3.22□□□□□ -1.89
RIF1YBR275C VPS9P54787 451 aa3.22□□□□□ -1.89
RIF1YBR275C RSF1Q05043 376 aa3.22□□□□□ -1.89
RIF1YBR275C HOG1P32485 435 aa3.22□□□□□ -1.89
RIF1YBR275C RDH54P38086 958 aa3.22□□□□□ -1.89
RIF1YBR275C SPC97P38863 823 aa3.22□□□□□ -1.89
RIF1YBR275C MRX1P40050 688 aa3.22□□□□□ -1.89
RIF1YBR275C CTF18P49956 741 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms