RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeast

Gene SWD3, Length 948 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWD3	YBR175W	RPS6A	P0CX37	236 aa	Known RBP	4.03	□□□□□ -1.76
SWD3	YBR175W	RPS6B	P0CX38	236 aa	Predicted RBP	4.03	□□□□□ -1.76
SWD3	YBR175W	NTH2	P35172	780 aa		4.03	□□□□□ -1.76
SWD3	YBR175W	POL32	P47110	350 aa		4.03	□□□□□ -1.76
SWD3	YBR175W	NNF1	P47149	201 aa		4.03	□□□□□ -1.76
SWD3	YBR175W	FAR11	P53917	953 aa		4.03	□□□□□ -1.76
SWD3	YBR175W	ECM23	Q02710	187 aa		4.03	□□□□□ -1.76
SWD3	YBR175W	MCM1	P11746	286 aa		4.02	□□□□□ -1.77
SWD3	YBR175W	ATE1	P16639	503 aa		4.02	□□□□□ -1.77
SWD3	YBR175W	PDI1	P17967	522 aa	Known RBP	4.02	□□□□□ -1.77
SWD3	YBR175W	FPS1	P23900	669 aa		4.02	□□□□□ -1.77
SWD3	YBR175W	UBP1	P25037	809 aa		4.02	□□□□□ -1.77
SWD3	YBR175W	YHL050C	P38721	697 aa		4.02	□□□□□ -1.77
SWD3	YBR175W	YHR219W	P38900	624 aa		4.02	□□□□□ -1.77
SWD3	YBR175W	KTR7	P40504	517 aa		4.02	□□□□□ -1.77
SWD3	YBR175W	ACS2	P52910	683 aa	Known RBP	4.02	□□□□□ -1.77
SWD3	YBR175W	YPQ2	Q06328	317 aa		4.02	□□□□□ -1.77
SWD3	YBR175W	PSH1	Q12161	406 aa		4.02	□□□□□ -1.77
SWD3	YBR175W	RPS31	P05759	152 aa	Known RBP	4.01	□□□□□ -1.77
SWD3	YBR175W	YCK2	P23292	546 aa	Known RBP	4.01	□□□□□ -1.77
SWD3	YBR175W	PDC6	P26263	563 aa	Known RBP	4.01	□□□□□ -1.77
SWD3	YBR175W	MRPL16	P38064	232 aa		4.01	□□□□□ -1.77
SWD3	YBR175W	YNR014W	P53719	212 aa		4.01	□□□□□ -1.77
SWD3	YBR175W	KAR5	Q04746	504 aa		4.01	□□□□□ -1.77
SWD3	YBR175W	SVF1	Q05515	481 aa		4.01	□□□□□ -1.77
SWD3	YBR175W	GLT1	Q12680	2145 aa	Known RBP	4.01	□□□□□ -1.77
SWD3	YBR175W	GRS1	P38088	690 aa	Known RBP	4	□□□□□ -1.77
SWD3	YBR175W	UBX7	P38349	436 aa		4	□□□□□ -1.77
SWD3	YBR175W	TPS3	P38426	1054 aa	Known RBP	4	□□□□□ -1.77
SWD3	YBR175W	PPX1	P38698	397 aa		4	□□□□□ -1.77
SWD3	YBR175W	NMD2	P38798	1089 aa	Known RBP	4	□□□□□ -1.77
SWD3	YBR175W	SPR3	P41901	512 aa		4	□□□□□ -1.77
SWD3	YBR175W	ROM1	P53046	1155 aa		4	□□□□□ -1.77
SWD3	YBR175W	YAF9	P53930	226 aa		4	□□□□□ -1.77
SWD3	YBR175W	WHI5	Q12416	295 aa		4	□□□□□ -1.77
SWD3	YBR175W	CYT1	P07143	309 aa		3.99	□□□□□ -1.77
SWD3	YBR175W	TRL1	P09880	827 aa	Known RBP	3.99	□□□□□ -1.77
SWD3	YBR175W	SBP1	P10080	294 aa	Known RBP	3.99	□□□□□ -1.77
SWD3	YBR175W	MDJ2	P42834	146 aa		3.99	□□□□□ -1.77
SWD3	YBR175W	OYE2	Q03558	400 aa	Known RBP	3.99	□□□□□ -1.77
SWD3	YBR175W	LEU1	P07264	779 aa	Known RBP	3.98	□□□□□ -1.77
SWD3	YBR175W	KNS1	P32350	737 aa	Predicted RBP	3.98	□□□□□ -1.77
SWD3	YBR175W	NGR1	P32831	672 aa	Known RBP	3.98	□□□□□ -1.77
SWD3	YBR175W	BOI2	P39969	1040 aa		3.98	□□□□□ -1.77
SWD3	YBR175W	THI12	P42883	340 aa		3.98	□□□□□ -1.77
SWD3	YBR175W	THI5	P43534	340 aa		3.98	□□□□□ -1.77
SWD3	YBR175W	THI11	P47183	340 aa		3.98	□□□□□ -1.77
SWD3	YBR175W	TY1A-DR2	Q03964	440 aa	Known RBP	3.98	□□□□□ -1.77
SWD3	YBR175W	PUF6	Q04373	656 aa	Known RBP	3.98	□□□□□ -1.77
SWD3	YBR175W	JIP5	Q06214	492 aa	Predicted RBP	3.98	□□□□□ -1.77
SWD3	YBR175W	THI13	Q07748	340 aa		3.98	□□□□□ -1.77
SWD3	YBR175W	YDR215C	Q12240	137 aa		3.98	□□□□□ -1.77
SWD3	YBR175W	STB3	Q12427	513 aa		3.98	□□□□□ -1.77
SWD3	YBR175W	MON2	P48563	1636 aa	Predicted RBP	3.97	□□□□□ -1.77
SWD3	YBR175W	PDC5	P16467	563 aa	Known RBP	3.97	□□□□□ -1.77
SWD3	YBR175W	VAN1	P23642	535 aa		3.97	□□□□□ -1.77
SWD3	YBR175W	SEC8	P32855	1065 aa		3.97	□□□□□ -1.77
SWD3	YBR175W	MET1	P36150	593 aa		3.97	□□□□□ -1.77
SWD3	YBR175W	SLN1	P39928	1220 aa	Predicted RBP	3.97	□□□□□ -1.77
SWD3	YBR175W	CWC15	Q03772	175 aa	Known RBP	3.97	□□□□□ -1.77
SWD3	YBR175W	SCD5	P34758	872 aa		3.96	□□□□□ -1.78
SWD3	YBR175W	ATG36	P46983	293 aa		3.96	□□□□□ -1.78
SWD3	YBR175W	ATG1	P53104	897 aa		3.96	□□□□□ -1.78
SWD3	YBR175W	RNH70	P53331	553 aa		3.96	□□□□□ -1.78
SWD3	YBR175W	MAG2	Q06436	670 aa	Known RBP	3.96	□□□□□ -1.78
SWD3	YBR175W	UTP4	Q06679	776 aa	Known RBP	3.96	□□□□□ -1.78
SWD3	YBR175W	YOL098C	Q12496	1037 aa		3.96	□□□□□ -1.78
SWD3	YBR175W	TRS33	Q99394	268 aa		3.96	□□□□□ -1.78
SWD3	YBR175W	AMN1	P38285	549 aa	Predicted RBP	3.95	□□□□□ -1.78
SWD3	YBR175W	MGE1	P38523	228 aa		3.95	□□□□□ -1.78
SWD3	YBR175W	MSC7	P38694	644 aa		3.95	□□□□□ -1.78
SWD3	YBR175W	BOL3	P39724	118 aa		3.95	□□□□□ -1.78
SWD3	YBR175W	YJR008W	P47085	338 aa		3.95	□□□□□ -1.78
SWD3	YBR175W	YJR107W	P47145	328 aa		3.95	□□□□□ -1.78
SWD3	YBR175W	CWH41	P53008	833 aa		3.95	□□□□□ -1.78
SWD3	YBR175W	RTS3	P53289	263 aa		3.95	□□□□□ -1.78
SWD3	YBR175W	HXT5	P38695	592 aa		3.94	□□□□□ -1.78
SWD3	YBR175W	NUG1	P40010	520 aa	Known RBP	3.94	□□□□□ -1.78
SWD3	YBR175W	YNL165W	P53891	406 aa		3.94	□□□□□ -1.78
SWD3	YBR175W	NUT2	Q06213	157 aa		3.94	□□□□□ -1.78
SWD3	YBR175W	RPP1A	P05318	106 aa	Predicted RBP	3.93	□□□□□ -1.78
SWD3	YBR175W	RGP1	P16664	663 aa		3.93	□□□□□ -1.78
SWD3	YBR175W	YTA6	P40328	754 aa		3.93	□□□□□ -1.78
SWD3	YBR175W	LSB6	P42951	607 aa		3.93	□□□□□ -1.78
SWD3	YBR175W	PNP1	Q05788	311 aa		3.93	□□□□□ -1.78
SWD3	YBR175W	MCA1	Q08601	432 aa		3.93	□□□□□ -1.78
SWD3	YBR175W	SRS2	P12954	1174 aa		3.92	□□□□□ -1.78
SWD3	YBR175W	MLF3	P32047	452 aa		3.92	□□□□□ -1.78
SWD3	YBR175W	MET4	P32389	672 aa		3.92	□□□□□ -1.78
SWD3	YBR175W	SUV3	P32580	737 aa		3.92	□□□□□ -1.78
SWD3	YBR175W	PPG1	P32838	368 aa		3.92	□□□□□ -1.78
SWD3	YBR175W	GLO3	P38682	493 aa	Known RBP	3.92	□□□□□ -1.78
SWD3	YBR175W	VAC8	P39968	578 aa		3.92	□□□□□ -1.78
SWD3	YBR175W	QDR1	P40475	563 aa		3.92	□□□□□ -1.78
SWD3	YBR175W	FRT1	Q99332	602 aa		3.92	□□□□□ -1.78
SWD3	YBR175W	Q0182	Q9ZZW1	134 aa		3.92	□□□□□ -1.78
SWD3	YBR175W	FUR4	P05316	633 aa	Known RBP	3.91	□□□□□ -1.78
SWD3	YBR175W	SRP40	P32583	406 aa	Predicted RBP	3.91	□□□□□ -1.78
SWD3	YBR175W	RRP14	P36080	434 aa	Known RBP	3.91	□□□□□ -1.78
SWD3	YBR175W	TAT1	P38085	619 aa		3.91	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms