RNA–Protein interactions for RNA: YBR080C

SEC18, Transcript of AAA ATPase and SNARE disassembly chaperone, yeastyeast

Gene SEC18, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC18YBR080C ATG13Q06628 738 aa6.87□□□□□ -1.31
SEC18YBR080C ENV9Q08651 330 aa6.87□□□□□ -1.31
SEC18YBR080C PEP7P32609 515 aa6.87□□□□□ -1.31
SEC18YBR080C PES4P39684 611 aa6.87□□□□□ -1.31
SEC18YBR080C NTG2Q08214 380 aa6.87□□□□□ -1.31
SEC18YBR080C APC11Q12157 165 aa6.87□□□□□ -1.31
SEC18YBR080C YRR1Q12172 810 aa6.87□□□□□ -1.31
SEC18YBR080C HXK1P04806 485 aaKnown RBP6.86□□□□□ -1.31
SEC18YBR080C BUD31P25337 157 aaPredicted RBP6.86□□□□□ -1.31
SEC18YBR080C TIM54P47045 478 aa6.86□□□□□ -1.31
SEC18YBR080C HSC82P15108 705 aaKnown RBP6.85□□□□□ -1.31
SEC18YBR080C PRI2P20457 528 aa6.85□□□□□ -1.31
SEC18YBR080C MTC2P34246 357 aa6.85□□□□□ -1.31
SEC18YBR080C FAA3P39002 694 aa6.85□□□□□ -1.31
SEC18YBR080C ESC2Q06340 456 aa6.85□□□□□ -1.31
SEC18YBR080C FRA1Q07825 749 aa6.85□□□□□ -1.31
SEC18YBR080C OPI10Q08202 246 aa6.85□□□□□ -1.31
SEC18YBR080C GAS4Q08271 471 aa6.85□□□□□ -1.31
SEC18YBR080C TSC13Q99190 310 aa6.85□□□□□ -1.31
SEC18YBR080C COG6P53959 839 aa6.84□□□□□ -1.31
SEC18YBR080C SPT16P32558 1035 aaKnown RBP6.84□□□□□ -1.31
SEC18YBR080C YNL034WP53963 612 aa6.84□□□□□ -1.31
SEC18YBR080C YNL018CP53976 612 aa6.84□□□□□ -1.31
SEC18YBR080C CSC1Q06538 782 aa6.84□□□□□ -1.31
SEC18YBR080C TMA7Q3E764 64 aaKnown RBP6.84□□□□□ -1.31
SEC18YBR080C TY4B-PA0A0B7P3V8 1104 aa6.83□□□□□ -1.32
SEC18YBR080C CDC34P14682 295 aa6.83□□□□□ -1.32
SEC18YBR080C MUM2P38236 366 aa6.83□□□□□ -1.32
SEC18YBR080C EXO84P38261 753 aa6.83□□□□□ -1.32
SEC18YBR080C NIT1P40447 199 aa6.83□□□□□ -1.32
SEC18YBR080C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
SEC18YBR080C BNA1P47096 177 aa6.83□□□□□ -1.32
SEC18YBR080C MAL11P53048 616 aa6.83□□□□□ -1.32
SEC18YBR080C TUB4P53378 473 aa6.83□□□□□ -1.32
SEC18YBR080C NAN1Q02931 896 aaKnown RBP6.83□□□□□ -1.32
SEC18YBR080C SRF1Q12516 437 aa6.83□□□□□ -1.32
SEC18YBR080C TY4A-HQ6Q5P6 413 aa6.83□□□□□ -1.32
SEC18YBR080C CAN1P04817 590 aa6.83□□□□□ -1.32
SEC18YBR080C RPB10P22139 70 aa6.83□□□□□ -1.32
SEC18YBR080C MSH2P25847 964 aa6.83□□□□□ -1.32
SEC18YBR080C DAS1P47005 663 aa6.83□□□□□ -1.32
SEC18YBR080C CWC24P53769 259 aa6.83□□□□□ -1.32
SEC18YBR080C VMS1Q04311 632 aaKnown RBP6.83□□□□□ -1.32
SEC18YBR080C PGI1P12709 554 aaKnown RBP6.82□□□□□ -1.32
SEC18YBR080C RTP1Q12751 981 aa6.82□□□□□ -1.32
SEC18YBR080C NPR1P22211 790 aa6.81□□□□□ -1.32
SEC18YBR080C YAP1801P38856 637 aa6.81□□□□□ -1.32
SEC18YBR080C YGR237CP50089 785 aa6.81□□□□□ -1.32
SEC18YBR080C TDA5Q06417 326 aaKnown RBP6.81□□□□□ -1.32
SEC18YBR080C PSR1Q07800 427 aa6.81□□□□□ -1.32
SEC18YBR080C PDI1P17967 522 aaKnown RBP6.81□□□□□ -1.32
SEC18YBR080C VPS35P34110 944 aa6.81□□□□□ -1.32
SEC18YBR080C HSE1P38753 452 aa6.81□□□□□ -1.32
SEC18YBR080C SPR3P41901 512 aa6.81□□□□□ -1.32
SEC18YBR080C UBX4P54730 416 aa6.81□□□□□ -1.32
SEC18YBR080C YOL087CQ99247 1116 aa6.81□□□□□ -1.32
SEC18YBR080C CCP1P00431 361 aa6.8□□□□□ -1.32
SEC18YBR080C MPD2Q99316 277 aa6.8□□□□□ -1.32
SEC18YBR080C CYT1P07143 309 aa6.8□□□□□ -1.32
SEC18YBR080C SWI3P32591 825 aa6.8□□□□□ -1.32
SEC18YBR080C TY1B-AO13527 1196 aaKnown RBP6.79□□□□□ -1.32
SEC18YBR080C MRF1P30775 413 aaPredicted RBP6.79□□□□□ -1.32
SEC18YBR080C GCD6P32501 712 aaKnown RBP6.79□□□□□ -1.32
SEC18YBR080C SLI15P38283 698 aa6.79□□□□□ -1.32
SEC18YBR080C SOH1P38633 127 aa6.79□□□□□ -1.32
SEC18YBR080C RRP8P38961 392 aaKnown RBP6.79□□□□□ -1.32
SEC18YBR080C HAL5P38970 855 aaKnown RBP6.79□□□□□ -1.32
SEC18YBR080C YNL115CP53925 644 aa6.79□□□□□ -1.32
SEC18YBR080C UTP13Q05946 817 aaKnown RBP6.79□□□□□ -1.32
SEC18YBR080C SST2P11972 698 aaKnown RBP6.79□□□□□ -1.32
SEC18YBR080C YBR071WP38243 211 aa6.79□□□□□ -1.32
SEC18YBR080C SPC105P53148 917 aa6.79□□□□□ -1.32
SEC18YBR080C PIB1Q06651 286 aa6.79□□□□□ -1.32
SEC18YBR080C IRC3Q06683 689 aa6.79□□□□□ -1.32
SEC18YBR080C SPT2P06843 333 aaPredicted RBP6.78□□□□□ -1.32
SEC18YBR080C YBR197CP38306 217 aa6.78□□□□□ -1.32
SEC18YBR080C PEA2P40091 420 aa6.78□□□□□ -1.32
SEC18YBR080C SAM3Q08986 587 aa6.78□□□□□ -1.32
SEC18YBR080C APA1P16550 321 aaKnown RBP6.78□□□□□ -1.32
SEC18YBR080C PFD1P46988 109 aa6.78□□□□□ -1.32
SEC18YBR080C CDC55Q00362 526 aa6.78□□□□□ -1.32
SEC18YBR080C NYV1Q12255 253 aa6.78□□□□□ -1.32
SEC18YBR080C VAN1P23642 535 aa6.77□□□□□ -1.33
SEC18YBR080C UBP1P25037 809 aa6.77□□□□□ -1.33
SEC18YBR080C TIF4632P39936 914 aaKnown RBP6.77□□□□□ -1.33
SEC18YBR080C NDE1P40215 560 aa6.77□□□□□ -1.33
SEC18YBR080C PIP2P52960 996 aa6.77□□□□□ -1.33
SEC18YBR080C RTA1P53047 317 aa6.77□□□□□ -1.33
SEC18YBR080C PLC1P32383 869 aa6.76□□□□□ -1.33
SEC18YBR080C ECM32P32644 1121 aaKnown RBP6.76□□□□□ -1.33
SEC18YBR080C PEX6P33760 1030 aa6.76□□□□□ -1.33
SEC18YBR080C PKH1Q03407 766 aa6.76□□□□□ -1.33
SEC18YBR080C CAB1Q04430 367 aa6.76□□□□□ -1.33
SEC18YBR080C HOM3P10869 527 aa6.76□□□□□ -1.33
SEC18YBR080C RPL8BP29453 256 aaKnown RBP6.76□□□□□ -1.33
SEC18YBR080C EUG1P32474 517 aa6.76□□□□□ -1.33
SEC18YBR080C FIG4P42837 879 aa6.76□□□□□ -1.33
SEC18YBR080C STR2P47164 639 aa6.76□□□□□ -1.33
SEC18YBR080C SAM37P50110 327 aa6.76□□□□□ -1.33
SEC18YBR080C TFB2Q02939 513 aa6.76□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms