RNA–Protein interactions for RNA: YBL024W

NCL1, Transcript of S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, yeast

Gene NCL1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCL1	YBL024W	ICP55	P40051	511 aa		3.56	□□□□□ -1.84
NCL1	YBL024W	HEH2	Q03281	663 aa		3.56	□□□□□ -1.84
NCL1	YBL024W	GPM1	P00950	247 aa	Known RBP	3.56	□□□□□ -1.84
NCL1	YBL024W	SRS2	P12954	1174 aa		3.56	□□□□□ -1.84
NCL1	YBL024W	QDR2	P40474	542 aa		3.56	□□□□□ -1.84
NCL1	YBL024W	ALD4	P46367	519 aa	Known RBP	3.56	□□□□□ -1.84
NCL1	YBL024W	YNR014W	P53719	212 aa		3.56	□□□□□ -1.84
NCL1	YBL024W	TY1A-DR2	Q03964	440 aa	Known RBP	3.56	□□□□□ -1.84
NCL1	YBL024W	SUV3	P32580	737 aa		3.55	□□□□□ -1.84
NCL1	YBL024W	MET1	P36150	593 aa		3.55	□□□□□ -1.84
NCL1	YBL024W	CUS1	Q02554	436 aa	Predicted RBP	3.55	□□□□□ -1.84
NCL1	YBL024W	MTC5	Q03897	1148 aa		3.55	□□□□□ -1.84
NCL1	YBL024W	CAB1	Q04430	367 aa		3.55	□□□□□ -1.84
NCL1	YBL024W	MRPL33	P20084	86 aa		3.55	□□□□□ -1.84
NCL1	YBL024W	ISC10	P32645	267 aa		3.55	□□□□□ -1.84
NCL1	YBL024W	DYS1	P38791	387 aa		3.55	□□□□□ -1.84
NCL1	YBL024W	CWC15	Q03772	175 aa	Known RBP	3.55	□□□□□ -1.84
NCL1	YBL024W	YBL113C	Q7M4S9	792 aa		3.55	□□□□□ -1.84
NCL1	YBL024W	PDC5	P16467	563 aa	Known RBP	3.54	□□□□□ -1.84
NCL1	YBL024W	KNS1	P32350	737 aa	Predicted RBP	3.54	□□□□□ -1.84
NCL1	YBL024W	RRN6	P32786	894 aa		3.54	□□□□□ -1.84
NCL1	YBL024W	MDJ1	P35191	511 aa		3.54	□□□□□ -1.84
NCL1	YBL024W	LDH1	P38139	375 aa		3.54	□□□□□ -1.84
NCL1	YBL024W	YBR197C	P38306	217 aa		3.54	□□□□□ -1.84
NCL1	YBL024W	ERP5	P38819	212 aa		3.54	□□□□□ -1.84
NCL1	YBL024W	SKP1	P52286	194 aa		3.54	□□□□□ -1.84
NCL1	YBL024W	VMA3	P25515	160 aa		3.53	□□□□□ -1.84
NCL1	YBL024W	YBR287W	P38355	427 aa		3.53	□□□□□ -1.84
NCL1	YBL024W	MSC7	P38694	644 aa		3.53	□□□□□ -1.84
NCL1	YBL024W	APM2	P38700	605 aa		3.53	□□□□□ -1.84
NCL1	YBL024W	IPL1	P38991	367 aa		3.53	□□□□□ -1.84
NCL1	YBL024W	BOI2	P39969	1040 aa		3.53	□□□□□ -1.84
NCL1	YBL024W	SBE2	P42223	864 aa	Known RBP	3.53	□□□□□ -1.84
NCL1	YBL024W	PNP1	Q05788	311 aa		3.53	□□□□□ -1.84
NCL1	YBL024W	YPR053C	Q6Q5F3	151 aa		3.53	□□□□□ -1.84
NCL1	YBL024W	RPC31	P17890	251 aa		3.52	□□□□□ -1.85
NCL1	YBL024W	HEM3	P28789	327 aa		3.52	□□□□□ -1.85
NCL1	YBL024W	KAR5	Q04746	504 aa		3.52	□□□□□ -1.85
NCL1	YBL024W	TRL1	P09880	827 aa	Known RBP	3.51	□□□□□ -1.85
NCL1	YBL024W	STM1	P39015	273 aa	Known RBP	3.51	□□□□□ -1.85
NCL1	YBL024W	YFL066C	P43538	392 aa		3.51	□□□□□ -1.85
NCL1	YBL024W	TDA6	Q06466	467 aa		3.51	□□□□□ -1.85
NCL1	YBL024W	GIP1	P38229	639 aa		3.51	□□□□□ -1.85
NCL1	YBL024W	BOL3	P39724	118 aa		3.51	□□□□□ -1.85
NCL1	YBL024W	FIR1	P40020	876 aa		3.51	□□□□□ -1.85
NCL1	YBL024W	PRK1	P40494	810 aa		3.51	□□□□□ -1.85
NCL1	YBL024W	YOR296W	Q08748	1289 aa		3.51	□□□□□ -1.85
NCL1	YBL024W	FUR4	P05316	633 aa	Known RBP	3.5	□□□□□ -1.85
NCL1	YBL024W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.5	□□□□□ -1.85	not detected
NCL1	YBL024W	ISW1	P38144	1129 aa		3.5	□□□□□ -1.85
NCL1	YBL024W	MDJ2	P42834	146 aa		3.5	□□□□□ -1.85
NCL1	YBL024W	YMR187C	Q03236	431 aa		3.5	□□□□□ -1.85
NCL1	YBL024W	GRS1	P38088	690 aa	Known RBP	3.5	□□□□□ -1.85
NCL1	YBL024W	ALG14	P38242	237 aa		3.5	□□□□□ -1.85
NCL1	YBL024W	MCX1	P38323	520 aa	Predicted RBP	3.5	□□□□□ -1.85
NCL1	YBL024W	YNR040W	P53736	256 aa		3.5	□□□□□ -1.85
NCL1	YBL024W	RSC2	Q06488	889 aa		3.5	□□□□□ -1.85
NCL1	YBL024W	MSC6	Q08818	692 aa	Known RBP	3.5	□□□□□ -1.85
NCL1	YBL024W	BSD2	P38356	321 aa		3.49	□□□□□ -1.85
NCL1	YBL024W	YHL050C	P38721	697 aa		3.49	□□□□□ -1.85
NCL1	YBL024W	YHR219W	P38900	624 aa		3.49	□□□□□ -1.85
NCL1	YBL024W	LSB3	P43603	459 aa	Known RBP	3.49	□□□□□ -1.85
NCL1	YBL024W	NHA1	Q99271	985 aa		3.49	□□□□□ -1.85
NCL1	YBL024W	ITC1	P53125	1264 aa		3.48	□□□□□ -1.85
NCL1	YBL024W	SNU71	P53207	620 aa	Known RBP	3.48	□□□□□ -1.85
NCL1	YBL024W	SEC20	P28791	383 aa		3.48	□□□□□ -1.85
NCL1	YBL024W	PGM2	P37012	569 aa	Known RBP	3.48	□□□□□ -1.85
NCL1	YBL024W	YER156C	P40093	338 aa	Known RBP	3.48	□□□□□ -1.85
NCL1	YBL024W	HXT8	P40886	569 aa		3.48	□□□□□ -1.85
NCL1	YBL024W	SUT1	P53032	299 aa	Known RBP	3.48	□□□□□ -1.85
NCL1	YBL024W	ATG1	P53104	897 aa		3.48	□□□□□ -1.85
NCL1	YBL024W	IDI1	P15496	288 aa		3.47	□□□□□ -1.85
NCL1	YBL024W	MSN1	P22148	382 aa		3.47	□□□□□ -1.85
NCL1	YBL024W	PAM1	P37304	830 aa	Known RBP	3.47	□□□□□ -1.85
NCL1	YBL024W	WHI5	Q12416	295 aa		3.47	□□□□□ -1.85
NCL1	YBL024W	GLO3	P38682	493 aa	Known RBP	3.47	□□□□□ -1.85
NCL1	YBL024W	QDR1	P40475	563 aa		3.47	□□□□□ -1.85
NCL1	YBL024W	NOP7	P53261	605 aa	Known RBP	3.47	□□□□□ -1.85
NCL1	YBL024W	LSO1	Q3E827	93 aa		3.47	□□□□□ -1.85
NCL1	YBL024W	ATE1	P16639	503 aa		3.46	□□□□□ -1.86
NCL1	YBL024W	SMC1	P32908	1225 aa		3.46	□□□□□ -1.86
NCL1	YBL024W	PPT1	P53043	513 aa		3.46	□□□□□ -1.86
NCL1	YBL024W	GIS4	Q04233	774 aa		3.46	□□□□□ -1.86
NCL1	YBL024W	RRP15	Q06511	250 aa	Predicted RBP	3.46	□□□□□ -1.86
NCL1	YBL024W	FRT1	Q99332	602 aa		3.46	□□□□□ -1.86
NCL1	YBL024W	BOI1	P38041	980 aa	Known RBP	3.45	□□□□□ -1.86
NCL1	YBL024W	TAT1	P38085	619 aa		3.45	□□□□□ -1.86
NCL1	YBL024W	PPX1	P38698	397 aa		3.45	□□□□□ -1.86
NCL1	YBL024W	AIM46	P38885	310 aa		3.45	□□□□□ -1.86
NCL1	YBL024W	SKN7	P38889	622 aa		3.45	□□□□□ -1.86
NCL1	YBL024W	YIL165C	P40446	119 aa		3.45	□□□□□ -1.86
NCL1	YBL024W	YJL181W	P46987	611 aa		3.45	□□□□□ -1.86
NCL1	YBL024W	NUT2	Q06213	157 aa		3.45	□□□□□ -1.86
NCL1	YBL024W	APC11	Q12157	165 aa		3.45	□□□□□ -1.86
NCL1	YBL024W	RPB10	P22139	70 aa		3.45	□□□□□ -1.86
NCL1	YBL024W	NAR1	P23503	491 aa	Known RBP	3.45	□□□□□ -1.86
NCL1	YBL024W	RAD55	P38953	406 aa		3.45	□□□□□ -1.86
NCL1	YBL024W	CCT8	P47079	568 aa	Known RBP	3.45	□□□□□ -1.86
NCL1	YBL024W	ACF4	P47129	309 aa		3.45	□□□□□ -1.86
NCL1	YBL024W	SLP1	Q12232	587 aa		3.45	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 88.5 ms