RNA–Protein interactions for RNA: ENST00000640577.1

SPIN3-242, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-242ENST00000640577 WDR43Q15061 677 aaKnown RBP eCLIP20.51■□□□□ 0.87
SPIN3-242ENST00000640577 PUS7Q96PZ0 661 aaKnown RBP20.51■□□□□ 0.87
SPIN3-242ENST00000640577 USP32Q8NFA0 1604 aa20.49■□□□□ 0.87
SPIN3-242ENST00000640577 ERICH6BQ5W0A0 696 aa20.49■□□□□ 0.87
SPIN3-242ENST00000640577 TNNT2P45379 298 aaPredicted RBP20.48■□□□□ 0.87
SPIN3-242ENST00000640577 POGKQ9P215 609 aa20.48■□□□□ 0.87
SPIN3-242ENST00000640577 ANKRD36BQ8N2N9 1353 aa20.48■□□□□ 0.87
SPIN3-242ENST00000640577 SRPK2P78362 688 aaKnown RBP20.47■□□□□ 0.87
SPIN3-242ENST00000640577 PLEKHH1Q9ULM0 1364 aa20.47■□□□□ 0.87
SPIN3-242ENST00000640577 PPP4R2Q9NY27 417 aa20.47■□□□□ 0.87
SPIN3-242ENST00000640577 PDE3BQ13370 1112 aa20.46■□□□□ 0.87
SPIN3-242ENST00000640577 TNRQ92752 1358 aa20.46■□□□□ 0.87
SPIN3-242ENST00000640577 MORC1Q86VD1 984 aa20.46■□□□□ 0.87
SPIN3-242ENST00000640577 WAPLQ7Z5K2 1190 aa20.45■□□□□ 0.86
SPIN3-242ENST00000640577 CCDC146Q8IYE0 955 aa20.45■□□□□ 0.86
SPIN3-242ENST00000640577 A0A1W2PP64 1363 aa20.45■□□□□ 0.86
SPIN3-242ENST00000640577 UBR1Q8IWV7 1749 aa20.45■□□□□ 0.86
SPIN3-242ENST00000640577 METP08581 1390 aa20.44■□□□□ 0.86
SPIN3-242ENST00000640577 CGNL1Q0VF96 1302 aa20.43■□□□□ 0.86
SPIN3-242ENST00000640577 CEBPAP49715 358 aaPredicted RBP20.43■□□□□ 0.86
SPIN3-242ENST00000640577 B4GALNT3Q6L9W6 998 aa20.43■□□□□ 0.86
SPIN3-242ENST00000640577 SHPRHQ149N8 1683 aa20.43■□□□□ 0.86
SPIN3-242ENST00000640577 CD163L1Q9NR16 1453 aa20.43■□□□□ 0.86
SPIN3-242ENST00000640577 POLR3AO14802 1390 aaPredicted RBP20.42■□□□□ 0.86
SPIN3-242ENST00000640577 CDK19Q9BWU1 502 aa20.42■□□□□ 0.86
SPIN3-242ENST00000640577 RCAN3Q9UKA8 241 aa20.41■□□□□ 0.86
SPIN3-242ENST00000640577 DLC1Q96QB1 1528 aa20.41■□□□□ 0.86
SPIN3-242ENST00000640577 ZNF521Q96K83 1311 aa20.4■□□□□ 0.86
SPIN3-242ENST00000640577 ABCC11Q96J66 1382 aa20.39■□□□□ 0.85
SPIN3-242ENST00000640577 ATAD2Q6PL18 1390 aa20.38■□□□□ 0.85
SPIN3-242ENST00000640577 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.38■□□□□ 0.85
SPIN3-242ENST00000640577 TMEM2Q9UHN6 1383 aa20.38■□□□□ 0.85
SPIN3-242ENST00000640577 NINLQ9Y2I6 1382 aa20.37■□□□□ 0.85
SPIN3-242ENST00000640577 APAF1O14727 1248 aa20.37■□□□□ 0.85
SPIN3-242ENST00000640577 TRHP20396 242 aaPredicted RBP20.37■□□□□ 0.85
SPIN3-242ENST00000640577 MTHFSP49914 203 aa20.37■□□□□ 0.85
SPIN3-242ENST00000640577 RRP1P56182 461 aaKnown RBP20.37■□□□□ 0.85
SPIN3-242ENST00000640577 C3P01024 1663 aa20.36■□□□□ 0.85
SPIN3-242ENST00000640577 CABP1Q9NZU7 370 aa20.36■□□□□ 0.85
SPIN3-242ENST00000640577 TXNDC2Q86VQ3 553 aa20.35■□□□□ 0.85
SPIN3-242ENST00000640577 GGNBP2Q9H3C7 697 aa20.35■□□□□ 0.85
SPIN3-242ENST00000640577 NLRP1Q9C000 1473 aa20.34■□□□□ 0.85
SPIN3-242ENST00000640577 NSD2O96028 1365 aa20.34■□□□□ 0.85
SPIN3-242ENST00000640577 LTKP29376 864 aa20.34■□□□□ 0.85
SPIN3-242ENST00000640577 PLPPR3Q6T4P5 718 aa20.34■□□□□ 0.85
SPIN3-242ENST00000640577 DUSP27Q5VZP5 1158 aa20.33■□□□□ 0.85
SPIN3-242ENST00000640577 FYB1O15117 783 aa20.33■□□□□ 0.84
SPIN3-242ENST00000640577 SPINK5Q9NQ38 1064 aaPredicted RBP20.33■□□□□ 0.84
SPIN3-242ENST00000640577 FER1L4A9Z1Z3 1794 aa20.32■□□□□ 0.84
SPIN3-242ENST00000640577 TERF2IPQ9NYB0 399 aa20.32■□□□□ 0.84
SPIN3-242ENST00000640577 DMRT2Q9Y5R5 561 aa20.32■□□□□ 0.84
SPIN3-242ENST00000640577 ADAMTS13Q76LX8 1427 aa20.31■□□□□ 0.84
SPIN3-242ENST00000640577 KNDC1Q76NI1 1749 aa20.31■□□□□ 0.84
SPIN3-242ENST00000640577 ANKRD26Q9UPS8 1709 aa20.31■□□□□ 0.84
SPIN3-242ENST00000640577 GOLGA2Q08379 1002 aa20.3■□□□□ 0.84
SPIN3-242ENST00000640577 PLIN1O60240 522 aa20.29■□□□□ 0.84
SPIN3-242ENST00000640577 HDGFP51858 240 aaKnown RBP20.29■□□□□ 0.84
SPIN3-242ENST00000640577 TECPR2O15040 1411 aa20.28■□□□□ 0.84
SPIN3-242ENST00000640577 SLFN5Q08AF3 891 aa20.28■□□□□ 0.84
SPIN3-242ENST00000640577 EXOC6Q8TAG9 804 aa20.27■□□□□ 0.84
SPIN3-242ENST00000640577 NCKAP5LQ9HCH0 1330 aa20.27■□□□□ 0.84
SPIN3-242ENST00000640577 KIF20BQ96Q89 1820 aa20.27■□□□□ 0.84
SPIN3-242ENST00000640577 CPS1P31327 1500 aa20.27■□□□□ 0.84
SPIN3-242ENST00000640577 WASLO00401 505 aaPredicted RBP20.27■□□□□ 0.84
SPIN3-242ENST00000640577 ROBO2Q9HCK4 1378 aa20.27■□□□□ 0.83
SPIN3-242ENST00000640577 HDGFL2Q7Z4V5 671 aaPredicted RBP20.26■□□□□ 0.83
SPIN3-242ENST00000640577 TRMT2AQ8IZ69 625 aaKnown RBP20.26■□□□□ 0.83
SPIN3-242ENST00000640577 FAM135BQ49AJ0 1406 aa20.25■□□□□ 0.83
SPIN3-242ENST00000640577 MED14O60244 1454 aa20.25■□□□□ 0.83
SPIN3-242ENST00000640577 PLEKHG1Q9ULL1 1385 aa20.24■□□□□ 0.83
SPIN3-242ENST00000640577 ATP7BP35670 1465 aa20.24■□□□□ 0.83
SPIN3-242ENST00000640577 IQSEC2Q5JU85 1478 aa20.24■□□□□ 0.83
SPIN3-242ENST00000640577 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.24■□□□□ 0.83
SPIN3-242ENST00000640577 CFAP53Q96M91 514 aa20.24■□□□□ 0.83
SPIN3-242ENST00000640577 RRP7AQ9Y3A4 280 aaKnown RBP20.24■□□□□ 0.83
SPIN3-242ENST00000640577 CCDC136Q96JN2 1154 aa20.23■□□□□ 0.83
SPIN3-242ENST00000640577 SLC26A8Q96RN1 970 aa20.23■□□□□ 0.83
SPIN3-242ENST00000640577 COL3A1P02461 1466 aaPredicted RBP20.23■□□□□ 0.83
SPIN3-242ENST00000640577 FBLN1P23142 703 aa20.23■□□□□ 0.83
SPIN3-242ENST00000640577 PPIP5K1Q6PFW1 1433 aa20.22■□□□□ 0.83
SPIN3-242ENST00000640577 WWC1Q8IX03 1113 aa20.22■□□□□ 0.83
SPIN3-242ENST00000640577 RUNDC1Q96C34 613 aa20.22■□□□□ 0.83
SPIN3-242ENST00000640577 SIRT1Q96EB6 747 aa20.22■□□□□ 0.83
SPIN3-242ENST00000640577 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.22■□□□□ 0.83
SPIN3-242ENST00000640577 NEUROD2Q15784 382 aa20.22■□□□□ 0.83
SPIN3-242ENST00000640577 TCP11L2Q8N4U5 519 aa20.22■□□□□ 0.83
SPIN3-242ENST00000640577 CPSF1Q10570 1443 aaKnown RBP20.21■□□□□ 0.83
SPIN3-242ENST00000640577 PTPRUQ92729 1446 aa20.21■□□□□ 0.83
SPIN3-242ENST00000640577 C20orf194Q5TEA3 1177 aa20.21■□□□□ 0.83
SPIN3-242ENST00000640577 NUDT16Q96DE0 195 aaKnown RBP20.21■□□□□ 0.83
SPIN3-242ENST00000640577 SLIT1O75093 1534 aa20.2■□□□□ 0.82
SPIN3-242ENST00000640577 ARHGAP23Q9P227 1491 aa20.2■□□□□ 0.82
SPIN3-242ENST00000640577 PRR36Q9H6K5 1346 aa20.2■□□□□ 0.82
SPIN3-242ENST00000640577 RBM19Q9Y4C8 960 aaKnown RBP20.19■□□□□ 0.82
SPIN3-242ENST00000640577 U2AF1L5P0DN76 240 aaPredicted RBP20.19■□□□□ 0.82
SPIN3-242ENST00000640577 U2AF1Q01081 240 aaKnown RBP eCLIP20.19■□□□□ 0.82
SPIN3-242ENST00000640577 PHF23Q9BUL5 403 aaPredicted RBP20.17■□□□□ 0.82
SPIN3-242ENST00000640577 ZRANB1Q9UGI0 708 aa20.17■□□□□ 0.82
SPIN3-242ENST00000640577 MAP2P11137 1827 aaKnown RBP20.17■□□□□ 0.82
SPIN3-242ENST00000640577 NKTRP30414 1462 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms