RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 RALGAPBQ86X10 1494 aa17.74■□□□□ 0.43
MECP2-226ENST00000640414 BRWD3Q6RI45 1802 aa17.73■□□□□ 0.43
MECP2-226ENST00000640414 PXDNQ92626 1479 aa17.72■□□□□ 0.43
MECP2-226ENST00000640414 ROBO2Q9HCK4 1378 aa17.72■□□□□ 0.43
MECP2-226ENST00000640414 SPHKAPQ2M3C7 1700 aa17.72■□□□□ 0.43
MECP2-226ENST00000640414 NEXMIFQ5QGS0 1516 aa17.72■□□□□ 0.43
MECP2-226ENST00000640414 NUP155O75694 1391 aa17.71■□□□□ 0.43
MECP2-226ENST00000640414 PSDA5PKW4 1024 aaPredicted RBP17.7■□□□□ 0.42
MECP2-226ENST00000640414 SF3B2Q13435 895 aaKnown RBP17.7■□□□□ 0.42
MECP2-226ENST00000640414 SLIT2O94813 1529 aa17.69■□□□□ 0.42
MECP2-226ENST00000640414 UNC5CLQ8IV45 518 aa17.69■□□□□ 0.42
MECP2-226ENST00000640414 NPHP3Q7Z494 1330 aa17.69■□□□□ 0.42
MECP2-226ENST00000640414 HRCP23327 699 aa17.67■□□□□ 0.42
MECP2-226ENST00000640414 XPCQ01831 940 aaPredicted RBP17.67■□□□□ 0.42
MECP2-226ENST00000640414 ESCO1Q5FWF5 840 aa17.66■□□□□ 0.42
MECP2-226ENST00000640414 SEPT12Q8IYM1 358 aa17.66■□□□□ 0.42
MECP2-226ENST00000640414 PRAG1Q86YV5 1406 aa17.65■□□□□ 0.42
MECP2-226ENST00000640414 FOXO3O43524 673 aa17.64■□□□□ 0.41
MECP2-226ENST00000640414 CLTCL1P53675 1640 aa17.64■□□□□ 0.41
MECP2-226ENST00000640414 ROCK1Q13464 1354 aa17.64■□□□□ 0.41
MECP2-226ENST00000640414 CDC42BPGQ6DT37 1551 aa17.63■□□□□ 0.41
MECP2-226ENST00000640414 HFM1A2PYH4 1435 aa17.63■□□□□ 0.41
MECP2-226ENST00000640414 USP32Q8NFA0 1604 aa17.61■□□□□ 0.41
MECP2-226ENST00000640414 BAG6P46379 1132 aa17.6■□□□□ 0.41
MECP2-226ENST00000640414 KRT27Q7Z3Y8 459 aa17.6■□□□□ 0.41
MECP2-226ENST00000640414 LRPPRCP42704 1394 aaKnown RBP17.59■□□□□ 0.41
MECP2-226ENST00000640414 ONECUT3O60422 494 aaPredicted RBP17.59■□□□□ 0.41
MECP2-226ENST00000640414 VPS72Q15906 364 aa17.59■□□□□ 0.41
MECP2-226ENST00000640414 KIF1BO60333 1816 aa17.58■□□□□ 0.4
MECP2-226ENST00000640414 SPATA31A3Q5VYP0 1347 aa17.57■□□□□ 0.4
MECP2-226ENST00000640414 PLCH1Q4KWH8 1693 aa17.56■□□□□ 0.4
MECP2-226ENST00000640414 NUTM2FA1L443 756 aa17.56■□□□□ 0.4
MECP2-226ENST00000640414 VGFO15240 615 aaPredicted RBP17.56■□□□□ 0.4
MECP2-226ENST00000640414 R3HDM1Q15032 1099 aaKnown RBP17.55■□□□□ 0.4
MECP2-226ENST00000640414 NWD2Q9ULI1 1742 aa17.55■□□□□ 0.4
MECP2-226ENST00000640414 NAIPQ13075 1403 aa17.55■□□□□ 0.4
MECP2-226ENST00000640414 EN1Q05925 392 aaPredicted RBP17.54■□□□□ 0.4
MECP2-226ENST00000640414 CCDC9Q9Y3X0 531 aaKnown RBP17.54■□□□□ 0.4
MECP2-226ENST00000640414 YY1P25490 414 aa17.52■□□□□ 0.4
MECP2-226ENST00000640414 RGPD1P0DJD0 1748 aa17.52■□□□□ 0.39
MECP2-226ENST00000640414 CCDC144AA2RUR9 1427 aa17.51■□□□□ 0.39
MECP2-226ENST00000640414 HAP1P54257 671 aaPredicted RBP17.51■□□□□ 0.39
MECP2-226ENST00000640414 CABLES1Q8TDN4 633 aa17.51■□□□□ 0.39
MECP2-226ENST00000640414 KIF1AQ12756 1690 aa17.51■□□□□ 0.39
MECP2-226ENST00000640414 A0A0G2JS52 829 aa17.5■□□□□ 0.39
MECP2-226ENST00000640414 MYT1Q01538 1121 aa17.5■□□□□ 0.39
MECP2-226ENST00000640414 KRT28Q7Z3Y7 464 aa17.49■□□□□ 0.39
MECP2-226ENST00000640414 ABCA3Q99758 1704 aa17.49■□□□□ 0.39
MECP2-226ENST00000640414 FMN2Q9NZ56 1722 aa17.49■□□□□ 0.39
MECP2-226ENST00000640414 PPLO60437 1756 aa17.48■□□□□ 0.39
MECP2-226ENST00000640414 TNS3Q68CZ2 1445 aa17.48■□□□□ 0.39
MECP2-226ENST00000640414 PLEKHG5O94827 1062 aa17.48■□□□□ 0.39
MECP2-226ENST00000640414 ITGAEP38570 1179 aa17.48■□□□□ 0.39
MECP2-226ENST00000640414 WAPLQ7Z5K2 1190 aa17.48■□□□□ 0.39
MECP2-226ENST00000640414 FAM98CQ17RN3 349 aaKnown RBP17.47■□□□□ 0.39
MECP2-226ENST00000640414 NRAPQ86VF7 1730 aa17.47■□□□□ 0.39
MECP2-226ENST00000640414 DISP2A7MBM2 1401 aa17.47■□□□□ 0.39
MECP2-226ENST00000640414 RPGRIP1LQ68CZ1 1315 aa17.47■□□□□ 0.39
MECP2-226ENST00000640414 FAM182BQ5T319 152 aa17.46■□□□□ 0.39
MECP2-226ENST00000640414 TNS1Q9HBL0 1735 aaKnown RBP17.46■□□□□ 0.39
MECP2-226ENST00000640414 TECPR2O15040 1411 aa17.46■□□□□ 0.39
MECP2-226ENST00000640414 PLEKHH1Q9ULM0 1364 aa17.45■□□□□ 0.38
MECP2-226ENST00000640414 FAM83GA6ND36 823 aa17.45■□□□□ 0.38
MECP2-226ENST00000640414 EZH2Q15910 746 aaKnown RBP17.44■□□□□ 0.38
MECP2-226ENST00000640414 STK26Q9P289 416 aa17.44■□□□□ 0.38
MECP2-226ENST00000640414 PSME1Q06323 249 aa17.42■□□□□ 0.38
MECP2-226ENST00000640414 RGPD8O14715 1765 aaPredicted RBP17.41■□□□□ 0.38
MECP2-226ENST00000640414 KNDC1Q76NI1 1749 aa17.41■□□□□ 0.38
MECP2-226ENST00000640414 SBNO1A3KN83 1393 aa17.4■□□□□ 0.38
MECP2-226ENST00000640414 LMOD2Q6P5Q4 547 aa17.4■□□□□ 0.38
MECP2-226ENST00000640414 CAMKK2Q96RR4 588 aa17.4■□□□□ 0.38
MECP2-226ENST00000640414 BTG4Q9NY30 223 aa17.4■□□□□ 0.38
MECP2-226ENST00000640414 PHF8Q9UPP1 1060 aa17.4■□□□□ 0.38
MECP2-226ENST00000640414 ARHGEF10O15013 1369 aa17.4■□□□□ 0.38
MECP2-226ENST00000640414 THSD7AQ9UPZ6 1657 aa17.39■□□□□ 0.37
MECP2-226ENST00000640414 PPARGC1BQ86YN6 1023 aaKnown RBP17.39■□□□□ 0.37
MECP2-226ENST00000640414 ADGRB2O60241 1585 aa17.39■□□□□ 0.37
MECP2-226ENST00000640414 ADGRF5Q8IZF2 1346 aa17.39■□□□□ 0.37
MECP2-226ENST00000640414 ABCC11Q96J66 1382 aa17.39■□□□□ 0.37
MECP2-226ENST00000640414 IFT172Q9UG01 1749 aa17.38■□□□□ 0.37
MECP2-226ENST00000640414 NRXN1Q9ULB1 1477 aa17.37■□□□□ 0.37
MECP2-226ENST00000640414 COL14A1Q05707 1796 aaKnown RBP17.36■□□□□ 0.37
MECP2-226ENST00000640414 TMEM132EQ6IEE7 984 aa17.36■□□□□ 0.37
MECP2-226ENST00000640414 SPATA31A5Q5VU36 1347 aa17.36■□□□□ 0.37
MECP2-226ENST00000640414 SPATA31A7Q8IWB4 1347 aa17.36■□□□□ 0.37
MECP2-226ENST00000640414 TRIM37O94972 964 aa17.35■□□□□ 0.37
MECP2-226ENST00000640414 RRBP1Q9P2E9 1410 aaKnown RBP17.35■□□□□ 0.37
MECP2-226ENST00000640414 PARD3Q8TEW0 1356 aa17.34■□□□□ 0.37
MECP2-226ENST00000640414 RREB1Q92766 1687 aa17.34■□□□□ 0.37
MECP2-226ENST00000640414 NUP188Q5SRE5 1749 aa17.33■□□□□ 0.36
MECP2-226ENST00000640414 YTHDC2Q9H6S0 1430 aaKnown RBP17.32■□□□□ 0.36
MECP2-226ENST00000640414 APBA3O96018 575 aa17.32■□□□□ 0.36
MECP2-226ENST00000640414 TRPM3Q9HCF6 1732 aaPredicted RBP17.31■□□□□ 0.36
MECP2-226ENST00000640414 FAM196AQ6ZSG2 479 aa17.31■□□□□ 0.36
MECP2-226ENST00000640414 DCAF8L1A6NGE4 600 aa17.3■□□□□ 0.36
MECP2-226ENST00000640414 PMFBP1Q8TBY8 1022 aa17.3■□□□□ 0.36
MECP2-226ENST00000640414 PPP1R1BQ9UD71 204 aaPredicted RBP17.3■□□□□ 0.36
MECP2-226ENST00000640414 ALS2Q96Q42 1657 aa17.29■□□□□ 0.36
MECP2-226ENST00000640414 CAMTA1Q9Y6Y1 1673 aa17.29■□□□□ 0.36
MECP2-226ENST00000640414 NINLQ9Y2I6 1382 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms