RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 NOS1P29475 1434 aa11.69□□□□□ -0.54
PAX6-259ENST00000639916 KIAA1210Q9ULL0 1709 aa11.69□□□□□ -0.54
PAX6-259ENST00000639916 ADGRB3O60242 1522 aa11.68□□□□□ -0.54
PAX6-259ENST00000639916 PARD3Q8TEW0 1356 aa11.68□□□□□ -0.54
PAX6-259ENST00000639916 POGKQ9P215 609 aa11.68□□□□□ -0.54
PAX6-259ENST00000639916 DIP2BQ9P265 1576 aa11.68□□□□□ -0.54
PAX6-259ENST00000639916 L1TD1Q5T7N2 865 aaKnown RBP11.68□□□□□ -0.54
PAX6-259ENST00000639916 NUDCQ9Y266 331 aa11.68□□□□□ -0.54
PAX6-259ENST00000639916 CAMSAP1Q5T5Y3 1602 aa11.67□□□□□ -0.54
PAX6-259ENST00000639916 NLRP13Q86W25 1043 aa11.67□□□□□ -0.54
PAX6-259ENST00000639916 IFT172Q9UG01 1749 aa11.67□□□□□ -0.54
PAX6-259ENST00000639916 NRXN1Q9ULB1 1477 aa11.66□□□□□ -0.54
PAX6-259ENST00000639916 TSPOAP1O95153 1857 aa11.66□□□□□ -0.54
PAX6-259ENST00000639916 TAF7LQ5H9L4 462 aa11.66□□□□□ -0.54
PAX6-259ENST00000639916 RPGRIP1LQ68CZ1 1315 aa11.66□□□□□ -0.54
PAX6-259ENST00000639916 BBXQ8WY36 941 aaPredicted RBP11.65□□□□□ -0.54
PAX6-259ENST00000639916 SENP3-EIF4A1A0A087X0R7 540 aa11.65□□□□□ -0.54
PAX6-259ENST00000639916 KNSTRNQ9Y448 316 aa11.65□□□□□ -0.54
PAX6-259ENST00000639916 SIGLEC1Q9BZZ2 1709 aa11.65□□□□□ -0.55
PAX6-259ENST00000639916 ARHGAP31Q2M1Z3 1444 aa11.64□□□□□ -0.55
PAX6-259ENST00000639916 C14orf93Q9H972 538 aaKnown RBP11.64□□□□□ -0.55
PAX6-259ENST00000639916 IDI1Q13907 227 aa11.64□□□□□ -0.55
PAX6-259ENST00000639916 NUTM2DQ5VT03 806 aaPredicted RBP11.64□□□□□ -0.55
PAX6-259ENST00000639916 LRPPRCP42704 1394 aaKnown RBP11.63□□□□□ -0.55
PAX6-259ENST00000639916 GTF2E1P29083 439 aaPredicted RBP11.63□□□□□ -0.55
PAX6-259ENST00000639916 NAP1L2Q9ULW6 460 aaPredicted RBP11.63□□□□□ -0.55
PAX6-259ENST00000639916 PIK3C2GO75747 1445 aa11.63□□□□□ -0.55
PAX6-259ENST00000639916 ZMYM4Q5VZL5 1548 aa11.63□□□□□ -0.55
PAX6-259ENST00000639916 PPLO60437 1756 aa11.63□□□□□ -0.55
PAX6-259ENST00000639916 TPM2P07951 284 aa11.62□□□□□ -0.55
PAX6-259ENST00000639916 TMEM132EQ6IEE7 984 aa11.62□□□□□ -0.55
PAX6-259ENST00000639916 CNKSR2Q8WXI2 1034 aa11.62□□□□□ -0.55
PAX6-259ENST00000639916 TRAK1Q9UPV9 953 aa11.62□□□□□ -0.55
PAX6-259ENST00000639916 SYNMO15061 1565 aa11.62□□□□□ -0.55
PAX6-259ENST00000639916 ZC3H13Q5T200 1668 aaKnown RBP11.62□□□□□ -0.55
PAX6-259ENST00000639916 VGFO15240 615 aaPredicted RBP11.62□□□□□ -0.55
PAX6-259ENST00000639916 SLC52A1Q9NWF4 448 aa11.62□□□□□ -0.55
PAX6-259ENST00000639916 XRCC6P12956 609 aaKnown RBP eCLIP11.61□□□□□ -0.55
PAX6-259ENST00000639916 PIK3C2BO00750 1634 aa11.61□□□□□ -0.55
PAX6-259ENST00000639916 ERVK-7P63135 1459 aa11.6□□□□□ -0.55
PAX6-259ENST00000639916 SETBP1Q9Y6X0 1596 aa11.6□□□□□ -0.55
PAX6-259ENST00000639916 AMER1Q5JTC6 1135 aaPredicted RBP11.6□□□□□ -0.55
PAX6-259ENST00000639916 FBXO31Q5XUX0 539 aaPredicted RBP11.6□□□□□ -0.55
PAX6-259ENST00000639916 EXOC6Q8TAG9 804 aa11.6□□□□□ -0.55
PAX6-259ENST00000639916 CHMP4BQ9H444 224 aaKnown RBP11.6□□□□□ -0.55
PAX6-259ENST00000639916 KDM5AP29375 1690 aaKnown RBP11.59□□□□□ -0.55
PAX6-259ENST00000639916 PANK2Q9BZ23 570 aa11.58□□□□□ -0.55
PAX6-259ENST00000639916 SBNO2Q9Y2G9 1366 aa11.58□□□□□ -0.56
PAX6-259ENST00000639916 ADGRB1O14514 1584 aa11.58□□□□□ -0.56
PAX6-259ENST00000639916 ARXQ96QS3 562 aa11.57□□□□□ -0.56
PAX6-259ENST00000639916 NEXMIFQ5QGS0 1516 aa11.57□□□□□ -0.56
PAX6-259ENST00000639916 SKAP1Q86WV1 359 aa11.57□□□□□ -0.56
PAX6-259ENST00000639916 MYOM1P52179 1685 aa11.57□□□□□ -0.56
PAX6-259ENST00000639916 PREX1Q8TCU6 1659 aa11.56□□□□□ -0.56
PAX6-259ENST00000639916 PPP2R1AP30153 589 aa11.56□□□□□ -0.56
PAX6-259ENST00000639916 MLECQ14165 292 aa11.56□□□□□ -0.56
PAX6-259ENST00000639916 MYO3AQ8NEV4 1616 aa11.56□□□□□ -0.56
PAX6-259ENST00000639916 ASXL1Q8IXJ9 1541 aa11.56□□□□□ -0.56
PAX6-259ENST00000639916 ERBB4Q15303 1308 aa11.56□□□□□ -0.56
PAX6-259ENST00000639916 FSD2A1L4K1 749 aa11.55□□□□□ -0.56
PAX6-259ENST00000639916 ESPNB1AK53 854 aa11.55□□□□□ -0.56
PAX6-259ENST00000639916 CANXP27824 592 aaKnown RBP11.55□□□□□ -0.56
PAX6-259ENST00000639916 ZHX1Q9UKY1 873 aaPredicted RBP11.55□□□□□ -0.56
PAX6-259ENST00000639916 RRP1P56182 461 aaKnown RBP11.55□□□□□ -0.56
PAX6-259ENST00000639916 SMAP1Q8IYB5 467 aaPredicted RBP11.55□□□□□ -0.56
PAX6-259ENST00000639916 CARD14Q9BXL6 1004 aa11.55□□□□□ -0.56
PAX6-259ENST00000639916 STAG3Q9UJ98 1225 aa11.55□□□□□ -0.56
PAX6-259ENST00000639916 AGLP35573 1532 aa11.55□□□□□ -0.56
PAX6-259ENST00000639916 GOLGA6L3A6NEY3 463 aa11.54□□□□□ -0.56
PAX6-259ENST00000639916 REREQ9P2R6 1566 aa11.54□□□□□ -0.56
PAX6-259ENST00000639916 NPC1L1Q9UHC9 1359 aa11.54□□□□□ -0.56
PAX6-259ENST00000639916 ZFYVE9O95405 1425 aa11.54□□□□□ -0.56
PAX6-259ENST00000639916 HOXD11P31277 338 aaPredicted RBP11.54□□□□□ -0.56
PAX6-259ENST00000639916 PAXIP1Q6ZW49 1069 aaPredicted RBP11.54□□□□□ -0.56
PAX6-259ENST00000639916 KIF13AQ9H1H9 1805 aa11.53□□□□□ -0.56
PAX6-259ENST00000639916 TMEM131LA2VDJ0 1609 aa11.53□□□□□ -0.56
PAX6-259ENST00000639916 MYO5BQ9ULV0 1848 aa11.53□□□□□ -0.56
PAX6-259ENST00000639916 IPO4Q8TEX9 1081 aaKnown RBP11.53□□□□□ -0.56
PAX6-259ENST00000639916 SLC12A5Q9H2X9 1139 aa11.52□□□□□ -0.57
PAX6-259ENST00000639916 STK26Q9P289 416 aa11.52□□□□□ -0.57
PAX6-259ENST00000639916 ADAMTS8Q9UP79 889 aa11.52□□□□□ -0.57
PAX6-259ENST00000639916 QRICH2Q9H0J4 1663 aa11.52□□□□□ -0.57
PAX6-259ENST00000639916 SAFB2Q14151 953 aaKnown RBP eCLIP11.51□□□□□ -0.57
PAX6-259ENST00000639916 KIAA1211Q6ZU35 1233 aa11.51□□□□□ -0.57
PAX6-259ENST00000639916 INSRP06213 1382 aa11.51□□□□□ -0.57
PAX6-259ENST00000639916 WDR43Q15061 677 aaKnown RBP eCLIP11.51□□□□□ -0.57
PAX6-259ENST00000639916 KLHL34Q8N239 644 aa11.51□□□□□ -0.57
PAX6-259ENST00000639916 CLTCQ00610 1675 aaKnown RBP11.51□□□□□ -0.57
PAX6-259ENST00000639916 EVC2Q86UK5 1308 aa11.5□□□□□ -0.57
PAX6-259ENST00000639916 NCBP3Q53F19 620 aaKnown RBP11.5□□□□□ -0.57
PAX6-259ENST00000639916 BLMP54132 1417 aaPredicted RBP11.5□□□□□ -0.57
PAX6-259ENST00000639916 PDE3BQ13370 1112 aa11.5□□□□□ -0.57
PAX6-259ENST00000639916 ESF1Q9H501 851 aaKnown RBP11.5□□□□□ -0.57
PAX6-259ENST00000639916 RNF216Q9NWF9 866 aaPredicted RBP11.5□□□□□ -0.57
PAX6-259ENST00000639916 RIPK4P57078 832 aa11.49□□□□□ -0.57
PAX6-259ENST00000639916 MAP7D2Q96T17 732 aa11.49□□□□□ -0.57
PAX6-259ENST00000639916 ARHGEF40Q8TER5 1519 aa11.48□□□□□ -0.57
PAX6-259ENST00000639916 ARHGEF28Q8N1W1 1705 aaKnown RBP11.48□□□□□ -0.57
PAX6-259ENST00000639916 C8orf34Q49A92 452 aa11.48□□□□□ -0.57
PAX6-259ENST00000639916 CDCA7LQ96GN5 454 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms