RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 LAMC1P11047 1609 aa17.14■□□□□ 0.33
PTP4A1-207ENST00000639568 A0A0G2JS52 829 aa17.13■□□□□ 0.33
PTP4A1-207ENST00000639568 DCAF8L1A6NGE4 600 aa17.13■□□□□ 0.33
PTP4A1-207ENST00000639568 MYT1Q01538 1121 aa17.13■□□□□ 0.33
PTP4A1-207ENST00000639568 XPCQ01831 940 aaPredicted RBP17.13■□□□□ 0.33
PTP4A1-207ENST00000639568 COL22A1Q8NFW1 1626 aaPredicted RBP17.13■□□□□ 0.33
PTP4A1-207ENST00000639568 FOXO3O43524 673 aa17.12■□□□□ 0.33
PTP4A1-207ENST00000639568 APLP2Q06481 763 aa17.12■□□□□ 0.33
PTP4A1-207ENST00000639568 HAP1P54257 671 aaPredicted RBP17.11■□□□□ 0.33
PTP4A1-207ENST00000639568 EN1Q05925 392 aaPredicted RBP17.1■□□□□ 0.33
PTP4A1-207ENST00000639568 LRPPRCP42704 1394 aaKnown RBP17.1■□□□□ 0.33
PTP4A1-207ENST00000639568 GLI3P10071 1580 aa17.1■□□□□ 0.33
PTP4A1-207ENST00000639568 NALCNQ8IZF0 1738 aa17.1■□□□□ 0.33
PTP4A1-207ENST00000639568 ONECUT3O60422 494 aaPredicted RBP17.09■□□□□ 0.33
PTP4A1-207ENST00000639568 VPS72Q15906 364 aa17.09■□□□□ 0.33
PTP4A1-207ENST00000639568 ADGRL2O95490 1459 aa17.09■□□□□ 0.33
PTP4A1-207ENST00000639568 SLIT2O94813 1529 aa17.08■□□□□ 0.32
PTP4A1-207ENST00000639568 FAM50AQ14320 339 aaKnown RBP17.08■□□□□ 0.32
PTP4A1-207ENST00000639568 NRXN3Q9Y4C0 1643 aa17.07■□□□□ 0.32
PTP4A1-207ENST00000639568 SPHKAPQ2M3C7 1700 aa17.07■□□□□ 0.32
PTP4A1-207ENST00000639568 ROBO2Q9HCK4 1378 aa17.05■□□□□ 0.32
PTP4A1-207ENST00000639568 IFFO2Q5TF58 517 aa17.05■□□□□ 0.32
PTP4A1-207ENST00000639568 PXDNQ92626 1479 aa17.05■□□□□ 0.32
PTP4A1-207ENST00000639568 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.04■□□□□ 0.32
PTP4A1-207ENST00000639568 E9PCH4 1651 aa17.02■□□□□ 0.32
PTP4A1-207ENST00000639568 NUP155O75694 1391 aa17.02■□□□□ 0.31
PTP4A1-207ENST00000639568 PLEKHG5O94827 1062 aa17.01■□□□□ 0.31
PTP4A1-207ENST00000639568 PPP1R1BQ9UD71 204 aaPredicted RBP17.01■□□□□ 0.31
PTP4A1-207ENST00000639568 HFM1A2PYH4 1435 aa17.01■□□□□ 0.31
PTP4A1-207ENST00000639568 SPATA31A3Q5VYP0 1347 aa17■□□□□ 0.31
PTP4A1-207ENST00000639568 NUTM2FA1L443 756 aa17■□□□□ 0.31
PTP4A1-207ENST00000639568 FAM98CQ17RN3 349 aaKnown RBP17■□□□□ 0.31
PTP4A1-207ENST00000639568 MARF1Q9Y4F3 1742 aaKnown RBP17■□□□□ 0.31
PTP4A1-207ENST00000639568 BRWD3Q6RI45 1802 aa17■□□□□ 0.31
PTP4A1-207ENST00000639568 IQGAP3Q86VI3 1631 aa16.99■□□□□ 0.31
PTP4A1-207ENST00000639568 SENP3-EIF4A1A0A087X0R7 540 aa16.99■□□□□ 0.31
PTP4A1-207ENST00000639568 VGFO15240 615 aaPredicted RBP16.99■□□□□ 0.31
PTP4A1-207ENST00000639568 EZH2Q15910 746 aaKnown RBP16.99■□□□□ 0.31
PTP4A1-207ENST00000639568 FAM182BQ5T319 152 aa16.97■□□□□ 0.31
PTP4A1-207ENST00000639568 KRT28Q7Z3Y7 464 aa16.97■□□□□ 0.31
PTP4A1-207ENST00000639568 CABLES1Q8TDN4 633 aa16.96■□□□□ 0.31
PTP4A1-207ENST00000639568 LMOD2Q6P5Q4 547 aa16.95■□□□□ 0.3
PTP4A1-207ENST00000639568 PSME1Q06323 249 aa16.94■□□□□ 0.3
PTP4A1-207ENST00000639568 CCDC144AA2RUR9 1427 aa16.94■□□□□ 0.3
PTP4A1-207ENST00000639568 DISP2A7MBM2 1401 aa16.94■□□□□ 0.3
PTP4A1-207ENST00000639568 USP32Q8NFA0 1604 aa16.93■□□□□ 0.3
PTP4A1-207ENST00000639568 NBPF8Q3BBV2 869 aa16.93■□□□□ 0.3
PTP4A1-207ENST00000639568 NBPF14Q5TI25 921 aa16.93■□□□□ 0.3
PTP4A1-207ENST00000639568 CAMKK2Q96RR4 588 aa16.93■□□□□ 0.3
PTP4A1-207ENST00000639568 SPON1Q9HCB6 807 aa16.93■□□□□ 0.3
PTP4A1-207ENST00000639568 FAM83GA6ND36 823 aa16.92■□□□□ 0.3
PTP4A1-207ENST00000639568 NEXMIFQ5QGS0 1516 aa16.91■□□□□ 0.3
PTP4A1-207ENST00000639568 PRAG1Q86YV5 1406 aa16.91■□□□□ 0.3
PTP4A1-207ENST00000639568 APBA3O96018 575 aa16.91■□□□□ 0.3
PTP4A1-207ENST00000639568 CDC42BPGQ6DT37 1551 aa16.9■□□□□ 0.3
PTP4A1-207ENST00000639568 TRIM37O94972 964 aa16.9■□□□□ 0.3
PTP4A1-207ENST00000639568 ZNF784Q8NCA9 323 aaPredicted RBP16.9■□□□□ 0.3
PTP4A1-207ENST00000639568 BTG4Q9NY30 223 aa16.9■□□□□ 0.3
PTP4A1-207ENST00000639568 NINLQ9Y2I6 1382 aa16.89■□□□□ 0.3
PTP4A1-207ENST00000639568 NAIPQ13075 1403 aa16.89■□□□□ 0.29
PTP4A1-207ENST00000639568 PARD3Q8TEW0 1356 aa16.89■□□□□ 0.29
PTP4A1-207ENST00000639568 KCNQ2O43526 872 aa16.88■□□□□ 0.29
PTP4A1-207ENST00000639568 FAM196AQ6ZSG2 479 aa16.88■□□□□ 0.29
PTP4A1-207ENST00000639568 TNS3Q68CZ2 1445 aa16.87■□□□□ 0.29
PTP4A1-207ENST00000639568 RGPD1P0DJD0 1748 aa16.87■□□□□ 0.29
PTP4A1-207ENST00000639568 STK26Q9P289 416 aa16.87■□□□□ 0.29
PTP4A1-207ENST00000639568 C1QTNF8P60827 252 aa16.86■□□□□ 0.29
PTP4A1-207ENST00000639568 WAPLQ7Z5K2 1190 aa16.86■□□□□ 0.29
PTP4A1-207ENST00000639568 ARHGEF10O15013 1369 aa16.86■□□□□ 0.29
PTP4A1-207ENST00000639568 ROCK1Q13464 1354 aa16.86■□□□□ 0.29
PTP4A1-207ENST00000639568 RPGRIP1LQ68CZ1 1315 aa16.85■□□□□ 0.29
PTP4A1-207ENST00000639568 NWD2Q9ULI1 1742 aa16.84■□□□□ 0.29
PTP4A1-207ENST00000639568 LOC105371045A0A1W2PR82 267 aa16.84■□□□□ 0.29
PTP4A1-207ENST00000639568 PHF8Q9UPP1 1060 aa16.84■□□□□ 0.29
PTP4A1-207ENST00000639568 ADGRB2O60241 1585 aa16.84■□□□□ 0.29
PTP4A1-207ENST00000639568 PLCH1Q4KWH8 1693 aa16.83■□□□□ 0.28
PTP4A1-207ENST00000639568 SPATA31A5Q5VU36 1347 aa16.83■□□□□ 0.28
PTP4A1-207ENST00000639568 SPATA31A7Q8IWB4 1347 aa16.83■□□□□ 0.28
PTP4A1-207ENST00000639568 SBNO1A3KN83 1393 aa16.81■□□□□ 0.28
PTP4A1-207ENST00000639568 ITGAEP38570 1179 aa16.79■□□□□ 0.28
PTP4A1-207ENST00000639568 KIF1AQ12756 1690 aa16.78■□□□□ 0.28
PTP4A1-207ENST00000639568 CLTCL1P53675 1640 aa16.78■□□□□ 0.28
PTP4A1-207ENST00000639568 PDE3BQ13370 1112 aa16.78■□□□□ 0.28
PTP4A1-207ENST00000639568 TNS1Q9HBL0 1735 aaKnown RBP16.76■□□□□ 0.27
PTP4A1-207ENST00000639568 PLEKHH1Q9ULM0 1364 aa16.75■□□□□ 0.27
PTP4A1-207ENST00000639568 PRDM11Q9NQV5 511 aa16.74■□□□□ 0.27
PTP4A1-207ENST00000639568 ABCC11Q96J66 1382 aa16.74■□□□□ 0.27
PTP4A1-207ENST00000639568 UTRNP46939 3433 aa16.74■□□□□ 0.27
PTP4A1-207ENST00000639568 SPATA31A1Q5TZJ5 1347 aa16.73■□□□□ 0.27
PTP4A1-207ENST00000639568 TECPR2O15040 1411 aa16.73■□□□□ 0.27
PTP4A1-207ENST00000639568 PMFBP1Q8TBY8 1022 aa16.73■□□□□ 0.27
PTP4A1-207ENST00000639568 RRBP1Q9P2E9 1410 aaKnown RBP16.72■□□□□ 0.27
PTP4A1-207ENST00000639568 TMEM132EQ6IEE7 984 aa16.72■□□□□ 0.27
PTP4A1-207ENST00000639568 STRN4Q9NRL3 753 aa16.72■□□□□ 0.27
PTP4A1-207ENST00000639568 USP35Q9P2H5 1018 aa16.72■□□□□ 0.27
PTP4A1-207ENST00000639568 KIF1BO60333 1816 aa16.71■□□□□ 0.27
PTP4A1-207ENST00000639568 NRXN1Q9ULB1 1477 aa16.71■□□□□ 0.27
PTP4A1-207ENST00000639568 CEP350Q5VT06 3117 aa16.71■□□□□ 0.27
PTP4A1-207ENST00000639568 NRAPQ86VF7 1730 aa16.7■□□□□ 0.26
PTP4A1-207ENST00000639568 THSD7AQ9UPZ6 1657 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms