RNA–Protein interactions for RNA: ENST00000639418.1

SPIN3-221, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-221ENST00000639418 SHPRHQ149N8 1683 aa17.02■□□□□ 0.31
SPIN3-221ENST00000639418 ZNF518AQ6AHZ1 1483 aa17.02■□□□□ 0.31
SPIN3-221ENST00000639418 TNNT2P45379 298 aaPredicted RBP17.02■□□□□ 0.31
SPIN3-221ENST00000639418 QRICH2Q9H0J4 1663 aa17.01■□□□□ 0.31
SPIN3-221ENST00000639418 CANXP27824 592 aaKnown RBP17.01■□□□□ 0.31
SPIN3-221ENST00000639418 SLC12A5Q9H2X9 1139 aa17.01■□□□□ 0.31
SPIN3-221ENST00000639418 IGHDP01880 384 aa17.01■□□□□ 0.31
SPIN3-221ENST00000639418 ZC3H13Q5T200 1668 aaKnown RBP17.01■□□□□ 0.31
SPIN3-221ENST00000639418 NINLQ9Y2I6 1382 aa17■□□□□ 0.31
SPIN3-221ENST00000639418 C14orf93Q9H972 538 aaKnown RBP17■□□□□ 0.31
SPIN3-221ENST00000639418 PPLO60437 1756 aa17■□□□□ 0.31
SPIN3-221ENST00000639418 NEUROD2Q15784 382 aa16.99■□□□□ 0.31
SPIN3-221ENST00000639418 RUNDC1Q96C34 613 aa16.99■□□□□ 0.31
SPIN3-221ENST00000639418 NPATQ14207 1427 aa16.98■□□□□ 0.31
SPIN3-221ENST00000639418 PANK1Q8TE04 598 aa16.98■□□□□ 0.31
SPIN3-221ENST00000639418 ADGRB1O14514 1584 aa16.98■□□□□ 0.31
SPIN3-221ENST00000639418 TMEM132EQ6IEE7 984 aa16.98■□□□□ 0.31
SPIN3-221ENST00000639418 CLUAP1Q96AJ1 413 aa16.98■□□□□ 0.31
SPIN3-221ENST00000639418 COG6Q9Y2V7 657 aa16.98■□□□□ 0.31
SPIN3-221ENST00000639418 RRP7AQ9Y3A4 280 aaKnown RBP16.98■□□□□ 0.31
SPIN3-221ENST00000639418 NFKBIBQ15653 356 aa16.96■□□□□ 0.31
SPIN3-221ENST00000639418 GGT6Q6P531 493 aa16.96■□□□□ 0.31
SPIN3-221ENST00000639418 TCP11L2Q8N4U5 519 aa16.96■□□□□ 0.31
SPIN3-221ENST00000639418 FRAT1Q92837 279 aaPredicted RBP16.96■□□□□ 0.31
SPIN3-221ENST00000639418 IQSEC2Q5JU85 1478 aa16.96■□□□□ 0.31
SPIN3-221ENST00000639418 CFAP65Q6ZU64 1925 aaKnown RBP16.96■□□□□ 0.31
SPIN3-221ENST00000639418 USP32Q8NFA0 1604 aa16.95■□□□□ 0.3
SPIN3-221ENST00000639418 RPGRIP1LQ68CZ1 1315 aa16.94■□□□□ 0.3
SPIN3-221ENST00000639418 MTHFSP49914 203 aa16.94■□□□□ 0.3
SPIN3-221ENST00000639418 RARSP54136 660 aaKnown RBP16.94■□□□□ 0.3
SPIN3-221ENST00000639418 FRMPD1Q5SYB0 1578 aa16.93■□□□□ 0.3
SPIN3-221ENST00000639418 VIRMAQ69YN4 1812 aaKnown RBP16.93■□□□□ 0.3
SPIN3-221ENST00000639418 CFAP53Q96M91 514 aa16.93■□□□□ 0.3
SPIN3-221ENST00000639418 PHF23Q9BUL5 403 aaPredicted RBP16.93■□□□□ 0.3
SPIN3-221ENST00000639418 MAPK8IP3Q9UPT6 1336 aa16.93■□□□□ 0.3
SPIN3-221ENST00000639418 WDR63Q8IWG1 891 aa16.93■□□□□ 0.3
SPIN3-221ENST00000639418 POGZQ7Z3K3 1410 aa16.92■□□□□ 0.3
SPIN3-221ENST00000639418 HECW2Q9P2P5 1572 aa16.91■□□□□ 0.3
SPIN3-221ENST00000639418 MLH3Q9UHC1 1453 aa16.91■□□□□ 0.3
SPIN3-221ENST00000639418 GLI2P10070 1586 aa16.9■□□□□ 0.3
SPIN3-221ENST00000639418 EVC2Q86UK5 1308 aa16.9■□□□□ 0.3
SPIN3-221ENST00000639418 CFAP74Q9C0B2 1584 aa16.9■□□□□ 0.3
SPIN3-221ENST00000639418 GSE1Q14687 1217 aa16.9■□□□□ 0.3
SPIN3-221ENST00000639418 CCDC27Q2M243 656 aa16.9■□□□□ 0.3
SPIN3-221ENST00000639418 ABCC3O15438 1527 aa16.9■□□□□ 0.3
SPIN3-221ENST00000639418 CD109Q6YHK3 1445 aa16.89■□□□□ 0.29
SPIN3-221ENST00000639418 NPM1P06748 294 aaKnown RBP eCLIP16.89■□□□□ 0.29
SPIN3-221ENST00000639418 AAMPQ13685 434 aa16.89■□□□□ 0.29
SPIN3-221ENST00000639418 PMFBP1Q8TBY8 1022 aa16.89■□□□□ 0.29
SPIN3-221ENST00000639418 NUTM2DQ5VT03 806 aaPredicted RBP16.88■□□□□ 0.29
SPIN3-221ENST00000639418 ANKRD36BQ8N2N9 1353 aa16.88■□□□□ 0.29
SPIN3-221ENST00000639418 RLBP1P12271 317 aa16.88■□□□□ 0.29
SPIN3-221ENST00000639418 PUS7Q96PZ0 661 aaKnown RBP16.88■□□□□ 0.29
SPIN3-221ENST00000639418 BCL2L13Q9BXK5 485 aa16.88■□□□□ 0.29
SPIN3-221ENST00000639418 USP19O94966 1318 aa16.88■□□□□ 0.29
SPIN3-221ENST00000639418 TNNQ9UQP3 1299 aa16.87■□□□□ 0.29
SPIN3-221ENST00000639418 TULP4Q9NRJ4 1543 aa16.87■□□□□ 0.29
SPIN3-221ENST00000639418 CAMSAP1Q5T5Y3 1602 aa16.87■□□□□ 0.29
SPIN3-221ENST00000639418 NSD2O96028 1365 aa16.87■□□□□ 0.29
SPIN3-221ENST00000639418 ARHGEF28Q8N1W1 1705 aaKnown RBP16.87■□□□□ 0.29
SPIN3-221ENST00000639418 VGFO15240 615 aaPredicted RBP16.87■□□□□ 0.29
SPIN3-221ENST00000639418 SEC24BO95487 1268 aa16.87■□□□□ 0.29
SPIN3-221ENST00000639418 U2AF1L5P0DN76 240 aaPredicted RBP16.87■□□□□ 0.29
SPIN3-221ENST00000639418 U2AF1Q01081 240 aaKnown RBP eCLIP16.87■□□□□ 0.29
SPIN3-221ENST00000639418 GLIPR1L2Q4G1C9 344 aa16.87■□□□□ 0.29
SPIN3-221ENST00000639418 MYH16Q9H6N6 1097 aa16.87■□□□□ 0.29
SPIN3-221ENST00000639418 PCDHB15Q9Y5E8 787 aa16.86■□□□□ 0.29
SPIN3-221ENST00000639418 CABP2Q9NPB3 220 aa16.85■□□□□ 0.29
SPIN3-221ENST00000639418 SIGLEC1Q9BZZ2 1709 aa16.85■□□□□ 0.29
SPIN3-221ENST00000639418 ZMYND15Q9H091 742 aa16.85■□□□□ 0.29
SPIN3-221ENST00000639418 NEXMIFQ5QGS0 1516 aa16.84■□□□□ 0.29
SPIN3-221ENST00000639418 NCBP3Q53F19 620 aaKnown RBP16.84■□□□□ 0.29
SPIN3-221ENST00000639418 PIK3C2BO00750 1634 aa16.84■□□□□ 0.29
SPIN3-221ENST00000639418 FRAT2O75474 233 aaPredicted RBP16.83■□□□□ 0.29
SPIN3-221ENST00000639418 BRPF3Q9ULD4 1205 aa16.83■□□□□ 0.28
SPIN3-221ENST00000639418 SAFB2Q14151 953 aaKnown RBP eCLIP16.82■□□□□ 0.28
SPIN3-221ENST00000639418 ADGRB2O60241 1585 aa16.82■□□□□ 0.28
SPIN3-221ENST00000639418 RWDD1Q9H446 243 aaPredicted RBP16.82■□□□□ 0.28
SPIN3-221ENST00000639418 RSPH6AQ9H0K4 717 aa16.81■□□□□ 0.28
SPIN3-221ENST00000639418 PDZRN3Q9UPQ7 1066 aa16.81■□□□□ 0.28
SPIN3-221ENST00000639418 VSIG10Q8N0Z9 540 aa16.8■□□□□ 0.28
SPIN3-221ENST00000639418 NLRP1Q9C000 1473 aa16.8■□□□□ 0.28
SPIN3-221ENST00000639418 MVPQ14764 893 aaKnown RBP16.8■□□□□ 0.28
SPIN3-221ENST00000639418 BECN1Q14457 450 aa16.79■□□□□ 0.28
SPIN3-221ENST00000639418 ZMYM3Q14202 1370 aa16.79■□□□□ 0.28
SPIN3-221ENST00000639418 A0A1W2PP64 1363 aa16.79■□□□□ 0.28
SPIN3-221ENST00000639418 RAPGEF3O95398 923 aa16.79■□□□□ 0.28
SPIN3-221ENST00000639418 ZKSCAN2Q63HK3 967 aa16.79■□□□□ 0.28
SPIN3-221ENST00000639418 ABCC11Q96J66 1382 aa16.79■□□□□ 0.28
SPIN3-221ENST00000639418 TSR2Q969E8 191 aaKnown RBP16.79■□□□□ 0.28
SPIN3-221ENST00000639418 STK26Q9P289 416 aa16.79■□□□□ 0.28
SPIN3-221ENST00000639418 U2SURPO15042 1029 aaKnown RBP16.78■□□□□ 0.28
SPIN3-221ENST00000639418 SRPK2P78362 688 aaKnown RBP16.78■□□□□ 0.28
SPIN3-221ENST00000639418 FTSJ3Q8IY81 847 aaKnown RBP16.78■□□□□ 0.28
SPIN3-221ENST00000639418 UPF2Q9HAU5 1272 aaKnown RBP16.78■□□□□ 0.28
SPIN3-221ENST00000639418 CT47B1P0C2W7 299 aaPredicted RBP16.77■□□□□ 0.28
SPIN3-221ENST00000639418 IDI1Q13907 227 aa16.77■□□□□ 0.28
SPIN3-221ENST00000639418 DZIP1LQ8IYY4 767 aaKnown RBP16.77■□□□□ 0.28
SPIN3-221ENST00000639418 SENP3Q9H4L4 574 aaPredicted RBP16.77■□□□□ 0.28
SPIN3-221ENST00000639418 PLEKHF1Q96S99 279 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms