RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 SHPRHQ149N8 1683 aa24.15■■□□□ 1.46
COLCA2-206ENST00000638573 TRIM26Q12899 539 aaPredicted RBP24.15■■□□□ 1.46
COLCA2-206ENST00000638573 C14orf93Q9H972 538 aaKnown RBP24.15■■□□□ 1.46
COLCA2-206ENST00000638573 YTHDC2Q9H6S0 1430 aaKnown RBP24.15■■□□□ 1.46
COLCA2-206ENST00000638573 MEX3CQ5U5Q3 659 aaKnown RBP24.14■■□□□ 1.45
COLCA2-206ENST00000638573 ABCC11Q96J66 1382 aa24.14■■□□□ 1.45
COLCA2-206ENST00000638573 MYOM2P54296 1465 aa24.13■■□□□ 1.45
COLCA2-206ENST00000638573 KDM2AQ9Y2K7 1162 aa24.13■■□□□ 1.45
COLCA2-206ENST00000638573 PNPLA6Q8IY17 1366 aa24.12■■□□□ 1.45
COLCA2-206ENST00000638573 XPCQ01831 940 aaPredicted RBP24.11■■□□□ 1.45
COLCA2-206ENST00000638573 SAFB2Q14151 953 aaKnown RBP eCLIP24.11■■□□□ 1.45
COLCA2-206ENST00000638573 CDC42BPGQ6DT37 1551 aa24.1■■□□□ 1.45
COLCA2-206ENST00000638573 ESCO1Q5FWF5 840 aa24.09■■□□□ 1.45
COLCA2-206ENST00000638573 LRRC59Q96AG4 307 aaKnown RBP24.08■■□□□ 1.45
COLCA2-206ENST00000638573 KNDC1Q76NI1 1749 aa24.07■■□□□ 1.44
COLCA2-206ENST00000638573 HRCP23327 699 aa24.07■■□□□ 1.44
COLCA2-206ENST00000638573 DCAF11Q8TEB1 546 aa24.07■■□□□ 1.44
COLCA2-206ENST00000638573 SOS2Q07890 1332 aaPredicted RBP24.07■■□□□ 1.44
COLCA2-206ENST00000638573 DHX57Q6P158 1386 aaKnown RBP24.06■■□□□ 1.44
COLCA2-206ENST00000638573 PRAM1Q96QH2 718 aa24.05■■□□□ 1.44
COLCA2-206ENST00000638573 FOXO3O43524 673 aa24.04■■□□□ 1.44
COLCA2-206ENST00000638573 LAMC1P11047 1609 aa24.03■■□□□ 1.44
COLCA2-206ENST00000638573 ADGRB1O14514 1584 aa24.03■■□□□ 1.44
COLCA2-206ENST00000638573 ADAMTS2O95450 1211 aa24.02■■□□□ 1.44
COLCA2-206ENST00000638573 AFF2P51816 1311 aa24.02■■□□□ 1.44
COLCA2-206ENST00000638573 C8orf37Q96NL8 207 aa24.01■■□□□ 1.43
COLCA2-206ENST00000638573 TRAK1Q9UPV9 953 aa24.01■■□□□ 1.43
COLCA2-206ENST00000638573 PXDNQ92626 1479 aa24■■□□□ 1.43
COLCA2-206ENST00000638573 HIRIP3Q9BW71 556 aaPredicted RBP23.98■■□□□ 1.43
COLCA2-206ENST00000638573 FMN2Q9NZ56 1722 aa23.98■■□□□ 1.43
COLCA2-206ENST00000638573 NPHP3Q7Z494 1330 aa23.96■■□□□ 1.43
COLCA2-206ENST00000638573 ZNF772Q68DY9 489 aaPredicted RBP23.96■■□□□ 1.43
COLCA2-206ENST00000638573 SIRT1Q96EB6 747 aa23.96■■□□□ 1.43
COLCA2-206ENST00000638573 POGKQ9P215 609 aa23.95■■□□□ 1.42
COLCA2-206ENST00000638573 MINK1Q8N4C8 1332 aaPredicted RBP23.93■■□□□ 1.42
COLCA2-206ENST00000638573 DLC1Q96QB1 1528 aa23.93■■□□□ 1.42
COLCA2-206ENST00000638573 PLEKHG5O94827 1062 aa23.91■■□□□ 1.42
COLCA2-206ENST00000638573 NGLY1Q96IV0 654 aa23.9■■□□□ 1.42
COLCA2-206ENST00000638573 PHF8Q9UPP1 1060 aa23.89■■□□□ 1.41
COLCA2-206ENST00000638573 RGPD8O14715 1765 aaPredicted RBP23.88■■□□□ 1.41
COLCA2-206ENST00000638573 USP32Q8NFA0 1604 aa23.88■■□□□ 1.41
COLCA2-206ENST00000638573 PRR36Q9H6K5 1346 aa23.88■■□□□ 1.41
COLCA2-206ENST00000638573 RXRBP28702 533 aa23.88■■□□□ 1.41
COLCA2-206ENST00000638573 KRT28Q7Z3Y7 464 aa23.88■■□□□ 1.41
COLCA2-206ENST00000638573 PMFBP1Q8TBY8 1022 aa23.88■■□□□ 1.41
COLCA2-206ENST00000638573 QTRT2Q9H974 415 aaKnown RBP23.87■■□□□ 1.41
COLCA2-206ENST00000638573 COL22A1Q8NFW1 1626 aaPredicted RBP23.87■■□□□ 1.41
COLCA2-206ENST00000638573 NBPF1Q3BBV0 1214 aa23.86■■□□□ 1.41
COLCA2-206ENST00000638573 SIN3AQ96ST3 1273 aa23.86■■□□□ 1.41
COLCA2-206ENST00000638573 SPATA31A3Q5VYP0 1347 aa23.85■■□□□ 1.41
COLCA2-206ENST00000638573 ADGRB2O60241 1585 aa23.83■■□□□ 1.41
COLCA2-206ENST00000638573 CABLES1Q8TDN4 633 aa23.83■■□□□ 1.41
COLCA2-206ENST00000638573 RGS12O14924 1447 aa23.83■■□□□ 1.4
COLCA2-206ENST00000638573 KIF1AQ12756 1690 aa23.83■■□□□ 1.4
COLCA2-206ENST00000638573 USP21Q9UK80 565 aa23.82■■□□□ 1.4
COLCA2-206ENST00000638573 PCGF6Q9BYE7 350 aa23.81■■□□□ 1.4
COLCA2-206ENST00000638573 ARHGEF28Q8N1W1 1705 aaKnown RBP23.79■■□□□ 1.4
COLCA2-206ENST00000638573 ANKARQ7Z5J8 1434 aa23.79■■□□□ 1.4
COLCA2-206ENST00000638573 WASLO00401 505 aaPredicted RBP23.79■■□□□ 1.4
COLCA2-206ENST00000638573 FNBP4Q8N3X1 1017 aaPredicted RBP23.79■■□□□ 1.4
COLCA2-206ENST00000638573 TNS3Q68CZ2 1445 aa23.78■■□□□ 1.4
COLCA2-206ENST00000638573 LMOD2Q6P5Q4 547 aa23.78■■□□□ 1.4
COLCA2-206ENST00000638573 L3MBTL2Q969R5 705 aa23.78■■□□□ 1.4
COLCA2-206ENST00000638573 STAC3Q96MF2 364 aa23.78■■□□□ 1.4
COLCA2-206ENST00000638573 RBM6P78332 1123 aaKnown RBP23.77■■□□□ 1.4
COLCA2-206ENST00000638573 NEUROD1Q13562 356 aa23.77■■□□□ 1.4
COLCA2-206ENST00000638573 BCL9LQ86UU0 1499 aa23.76■■□□□ 1.39
COLCA2-206ENST00000638573 TULP4Q9NRJ4 1543 aa23.76■■□□□ 1.39
COLCA2-206ENST00000638573 PSME1Q06323 249 aa23.76■■□□□ 1.39
COLCA2-206ENST00000638573 UPF1Q92900 1129 aaKnown RBP eCLIP23.75■■□□□ 1.39
COLCA2-206ENST00000638573 ATRNO75882 1429 aa23.75■■□□□ 1.39
COLCA2-206ENST00000638573 CDK12Q9NYV4 1490 aaPredicted RBP23.75■■□□□ 1.39
COLCA2-206ENST00000638573 SBNO1A3KN83 1393 aa23.72■■□□□ 1.39
COLCA2-206ENST00000638573 ATP7BP35670 1465 aa23.72■■□□□ 1.39
COLCA2-206ENST00000638573 CDK19Q9BWU1 502 aa23.71■■□□□ 1.39
COLCA2-206ENST00000638573 TRPC5Q9UL62 973 aaPredicted RBP23.71■■□□□ 1.39
COLCA2-206ENST00000638573 NUDT16Q96DE0 195 aaKnown RBP23.7■■□□□ 1.38
COLCA2-206ENST00000638573 TRPM3Q9HCF6 1732 aaPredicted RBP23.69■■□□□ 1.38
COLCA2-206ENST00000638573 HAP1P54257 671 aaPredicted RBP23.68■■□□□ 1.38
COLCA2-206ENST00000638573 SLIT2O94813 1529 aa23.68■■□□□ 1.38
COLCA2-206ENST00000638573 MARF1Q9Y4F3 1742 aaKnown RBP23.67■■□□□ 1.38
COLCA2-206ENST00000638573 NGDNQ8NEJ9 315 aaKnown RBP23.67■■□□□ 1.38
COLCA2-206ENST00000638573 KIAA1210Q9ULL0 1709 aa23.67■■□□□ 1.38
COLCA2-206ENST00000638573 ABCA3Q99758 1704 aa23.66■■□□□ 1.38
COLCA2-206ENST00000638573 EIF3AQ14152 1382 aaKnown RBP23.65■■□□□ 1.38
COLCA2-206ENST00000638573 ARHGEF10O15013 1369 aa23.65■■□□□ 1.38
COLCA2-206ENST00000638573 GPRASP1Q5JY77 1395 aa23.65■■□□□ 1.38
COLCA2-206ENST00000638573 PAK3O75914 559 aaPredicted RBP23.64■■□□□ 1.37
COLCA2-206ENST00000638573 NBPF8Q3BBV2 869 aa23.63■■□□□ 1.37
COLCA2-206ENST00000638573 UNC5CLQ8IV45 518 aa23.63■■□□□ 1.37
COLCA2-206ENST00000638573 GJD4Q96KN9 370 aaPredicted RBP23.63■■□□□ 1.37
COLCA2-206ENST00000638573 FAM83GA6ND36 823 aa23.62■■□□□ 1.37
COLCA2-206ENST00000638573 NUTM2GQ5VZR2 741 aa23.62■■□□□ 1.37
COLCA2-206ENST00000638573 CABP2Q9NPB3 220 aa23.62■■□□□ 1.37
COLCA2-206ENST00000638573 ALS2Q96Q42 1657 aa23.62■■□□□ 1.37
COLCA2-206ENST00000638573 CENPJQ9HC77 1338 aaPredicted RBP23.61■■□□□ 1.37
COLCA2-206ENST00000638573 GLI3P10071 1580 aa23.61■■□□□ 1.37
COLCA2-206ENST00000638573 RALGAPBQ86X10 1494 aa23.61■■□□□ 1.37
COLCA2-206ENST00000638573 ACEP12821 1306 aa23.59■■□□□ 1.37
COLCA2-206ENST00000638573 TOPAZ1Q8N9V7 1692 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms