RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-238ENST00000638514 PRDM4Q9UKN5 801 aa17.23■□□□□ 0.35
KCNMA1-238ENST00000638514 UNC13BO14795 1591 aa17.23■□□□□ 0.35
KCNMA1-238ENST00000638514 RARSP54136 660 aaKnown RBP17.22■□□□□ 0.35
KCNMA1-238ENST00000638514 HSCBQ8IWL3 235 aa17.22■□□□□ 0.35
KCNMA1-238ENST00000638514 TPM2P07951 284 aa17.22■□□□□ 0.35
KCNMA1-238ENST00000638514 MFAP1P55081 439 aaKnown RBP17.22■□□□□ 0.35
KCNMA1-238ENST00000638514 RSPH4AQ5TD94 716 aa17.21■□□□□ 0.35
KCNMA1-238ENST00000638514 U2SURPO15042 1029 aaKnown RBP17.2■□□□□ 0.34
KCNMA1-238ENST00000638514 RLBP1P12271 317 aa17.2■□□□□ 0.34
KCNMA1-238ENST00000638514 RTEL1-TNFRSF6BF6WH68 1400 aa17.2■□□□□ 0.34
KCNMA1-238ENST00000638514 IQGAP1P46940 1657 aa17.2■□□□□ 0.34
KCNMA1-238ENST00000638514 PDCL3Q9H2J4 239 aa17.19■□□□□ 0.34
KCNMA1-238ENST00000638514 TNNQ9UQP3 1299 aa17.19■□□□□ 0.34
KCNMA1-238ENST00000638514 TMEM132EQ6IEE7 984 aa17.19■□□□□ 0.34
KCNMA1-238ENST00000638514 ABCA8O94911 1581 aa17.18■□□□□ 0.34
KCNMA1-238ENST00000638514 ATP10BO94823 1461 aa17.18■□□□□ 0.34
KCNMA1-238ENST00000638514 ATP10AO60312 1499 aa17.18■□□□□ 0.34
KCNMA1-238ENST00000638514 BCL2L13Q9BXK5 485 aa17.18■□□□□ 0.34
KCNMA1-238ENST00000638514 ZNF692Q9BU19 519 aaPredicted RBP17.18■□□□□ 0.34
KCNMA1-238ENST00000638514 SCAF11Q99590 1463 aaKnown RBP17.18■□□□□ 0.34
KCNMA1-238ENST00000638514 IQGAP3Q86VI3 1631 aa17.17■□□□□ 0.34
KCNMA1-238ENST00000638514 ESF1Q9H501 851 aaKnown RBP17.17■□□□□ 0.34
KCNMA1-238ENST00000638514 SAMD9LQ8IVG5 1584 aa17.17■□□□□ 0.34
KCNMA1-238ENST00000638514 MYOM1P52179 1685 aa17.16■□□□□ 0.34
KCNMA1-238ENST00000638514 IFT140Q96RY7 1462 aa17.16■□□□□ 0.34
KCNMA1-238ENST00000638514 CALD1Q05682 793 aaKnown RBP17.16■□□□□ 0.34
KCNMA1-238ENST00000638514 NUTM2FA1L443 756 aa17.15■□□□□ 0.34
KCNMA1-238ENST00000638514 CFAP70Q5T0N1 1121 aa17.15■□□□□ 0.34
KCNMA1-238ENST00000638514 MADDQ8WXG6 1647 aa17.15■□□□□ 0.34
KCNMA1-238ENST00000638514 SRPK2P78362 688 aaKnown RBP17.14■□□□□ 0.33
KCNMA1-238ENST00000638514 GAS2L3Q86XJ1 694 aa17.14■□□□□ 0.33
KCNMA1-238ENST00000638514 GBP4Q96PP9 640 aa17.14■□□□□ 0.33
KCNMA1-238ENST00000638514 SCAPERQ9BY12 1400 aa17.13■□□□□ 0.33
KCNMA1-238ENST00000638514 SKOR2Q2VWA4 1001 aaPredicted RBP17.13■□□□□ 0.33
KCNMA1-238ENST00000638514 NCOA3Q9Y6Q9 1424 aa17.13■□□□□ 0.33
KCNMA1-238ENST00000638514 POLR3AO14802 1390 aaPredicted RBP17.13■□□□□ 0.33
KCNMA1-238ENST00000638514 MVPQ14764 893 aaKnown RBP17.12■□□□□ 0.33
KCNMA1-238ENST00000638514 CYB5RLQ6IPT4 315 aa17.12■□□□□ 0.33
KCNMA1-238ENST00000638514 TNPO1Q92973 898 aaKnown RBP17.12■□□□□ 0.33
KCNMA1-238ENST00000638514 DDIT3P35638 169 aa17.12■□□□□ 0.33
KCNMA1-238ENST00000638514 PTMSP20962 102 aa17.12■□□□□ 0.33
KCNMA1-238ENST00000638514 MORC1Q86VD1 984 aa17.12■□□□□ 0.33
KCNMA1-238ENST00000638514 KDM5AP29375 1690 aaKnown RBP17.12■□□□□ 0.33
KCNMA1-238ENST00000638514 FGD1P98174 961 aa17.11■□□□□ 0.33
KCNMA1-238ENST00000638514 CIZ1Q9ULV3 898 aaPredicted RBP17.11■□□□□ 0.33
KCNMA1-238ENST00000638514 KIAA1211Q6ZU35 1233 aa17.11■□□□□ 0.33
KCNMA1-238ENST00000638514 RUNDC1Q96C34 613 aa17.11■□□□□ 0.33
KCNMA1-238ENST00000638514 WDR63Q8IWG1 891 aa17.11■□□□□ 0.33
KCNMA1-238ENST00000638514 MAST1Q9Y2H9 1570 aa17.11■□□□□ 0.33
KCNMA1-238ENST00000638514 CDC42BPBQ9Y5S2 1711 aa17.1■□□□□ 0.33
KCNMA1-238ENST00000638514 CCDC173Q0VFZ6 552 aa17.1■□□□□ 0.33
KCNMA1-238ENST00000638514 FTSJ3Q8IY81 847 aaKnown RBP17.1■□□□□ 0.33
KCNMA1-238ENST00000638514 SNX21Q969T3 373 aa17.1■□□□□ 0.33
KCNMA1-238ENST00000638514 SYCP2Q9BX26 1530 aa17.1■□□□□ 0.33
KCNMA1-238ENST00000638514 PREX2Q70Z35 1606 aa17.09■□□□□ 0.33
KCNMA1-238ENST00000638514 HSP90AB1P08238 724 aaKnown RBP17.09■□□□□ 0.33
KCNMA1-238ENST00000638514 SMC5Q8IY18 1101 aa17.09■□□□□ 0.33
KCNMA1-238ENST00000638514 TCP11L2Q8N4U5 519 aa17.09■□□□□ 0.33
KCNMA1-238ENST00000638514 ZKSCAN2Q63HK3 967 aa17.08■□□□□ 0.33
KCNMA1-238ENST00000638514 CARD14Q9BXL6 1004 aa17.08■□□□□ 0.32
KCNMA1-238ENST00000638514 RAB3GAP1Q15042 981 aa17.08■□□□□ 0.32
KCNMA1-238ENST00000638514 DZIP1LQ8IYY4 767 aaKnown RBP17.07■□□□□ 0.32
KCNMA1-238ENST00000638514 ZBTB7CA1YPR0 619 aa17.07■□□□□ 0.32
KCNMA1-238ENST00000638514 RBM25P49756 843 aaKnown RBP17.07■□□□□ 0.32
KCNMA1-238ENST00000638514 ANP32BQ92688 251 aaKnown RBP17.07■□□□□ 0.32
KCNMA1-238ENST00000638514 STAC3Q96MF2 364 aa17.07■□□□□ 0.32
KCNMA1-238ENST00000638514 PHF23Q9BUL5 403 aaPredicted RBP17.07■□□□□ 0.32
KCNMA1-238ENST00000638514 ZSCAN30Q86W11 494 aa17.06■□□□□ 0.32
KCNMA1-238ENST00000638514 DUOX2Q9NRD8 1548 aa17.06■□□□□ 0.32
KCNMA1-238ENST00000638514 TTC37Q6PGP7 1564 aa17.06■□□□□ 0.32
KCNMA1-238ENST00000638514 U2AF1L5P0DN76 240 aaPredicted RBP17.06■□□□□ 0.32
KCNMA1-238ENST00000638514 U2AF1Q01081 240 aaKnown RBP eCLIP17.06■□□□□ 0.32
KCNMA1-238ENST00000638514 CEP152O94986 1710 aa17.06■□□□□ 0.32
KCNMA1-238ENST00000638514 HDAC1Q13547 482 aaPredicted RBP17.06■□□□□ 0.32
KCNMA1-238ENST00000638514 PPP1R9BQ96SB3 815 aa17.06■□□□□ 0.32
KCNMA1-238ENST00000638514 NASPP49321 788 aaPredicted RBP17.05■□□□□ 0.32
KCNMA1-238ENST00000638514 IQSEC2Q5JU85 1478 aa17.05■□□□□ 0.32
KCNMA1-238ENST00000638514 ARHGAP5Q13017 1502 aa17.04■□□□□ 0.32
KCNMA1-238ENST00000638514 OFD1O75665 1012 aa17.04■□□□□ 0.32
KCNMA1-238ENST00000638514 SPHKAPQ2M3C7 1700 aa17.04■□□□□ 0.32
KCNMA1-238ENST00000638514 MSNP26038 577 aaKnown RBP17.04■□□□□ 0.32
KCNMA1-238ENST00000638514 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.04■□□□□ 0.32
KCNMA1-238ENST00000638514 KANK1Q14678 1352 aa17.04■□□□□ 0.32
KCNMA1-238ENST00000638514 RAPGEF3O95398 923 aa17.03■□□□□ 0.32
KCNMA1-238ENST00000638514 CCDC27Q2M243 656 aa17.03■□□□□ 0.32
KCNMA1-238ENST00000638514 ERVK-7P63135 1459 aa17.02■□□□□ 0.32
KCNMA1-238ENST00000638514 SHPRHQ149N8 1683 aa17.02■□□□□ 0.31
KCNMA1-238ENST00000638514 GOLGA6L22H0YM25 854 aa17.02■□□□□ 0.31
KCNMA1-238ENST00000638514 RIPK4P57078 832 aa17.01■□□□□ 0.31
KCNMA1-238ENST00000638514 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.01■□□□□ 0.31
KCNMA1-238ENST00000638514 DDX19BQ9UMR2 479 aa17.01■□□□□ 0.31
KCNMA1-238ENST00000638514 TERF1P54274 439 aa17.01■□□□□ 0.31
KCNMA1-238ENST00000638514 C14orf37Q86TY3 774 aa17■□□□□ 0.31
KCNMA1-238ENST00000638514 ITPRIPQ8IWB1 547 aa17■□□□□ 0.31
KCNMA1-238ENST00000638514 MINK1Q8N4C8 1332 aaPredicted RBP17■□□□□ 0.31
KCNMA1-238ENST00000638514 ARID3AQ99856 593 aa16.99■□□□□ 0.31
KCNMA1-238ENST00000638514 FOXD4L1Q9NU39 408 aa16.99■□□□□ 0.31
KCNMA1-238ENST00000638514 SLC12A5Q9H2X9 1139 aa16.99■□□□□ 0.31
KCNMA1-238ENST00000638514 SMC4Q9NTJ3 1288 aa16.99■□□□□ 0.31
KCNMA1-238ENST00000638514 FAM13BQ9NYF5 915 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms