RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 HNRNPUQ00839 825 aaKnown RBP eCLIP13.48□□□□□ -0.25
ATM-226ENST00000638443 UBR1Q8IWV7 1749 aa13.48□□□□□ -0.25
ATM-226ENST00000638443 SBNO2Q9Y2G9 1366 aa13.48□□□□□ -0.25
ATM-226ENST00000638443 TULP4Q9NRJ4 1543 aa13.48□□□□□ -0.25
ATM-226ENST00000638443 SETD1AO15047 1707 aaKnown RBP13.48□□□□□ -0.25
ATM-226ENST00000638443 PARD3Q8TEW0 1356 aa13.48□□□□□ -0.25
ATM-226ENST00000638443 SENP3-EIF4A1A0A087X0R7 540 aa13.47□□□□□ -0.25
ATM-226ENST00000638443 KTN1Q86UP2 1357 aaKnown RBP13.47□□□□□ -0.25
ATM-226ENST00000638443 YTHDC2Q9H6S0 1430 aaKnown RBP13.47□□□□□ -0.25
ATM-226ENST00000638443 MYBBP1AQ9BQG0 1328 aaKnown RBP13.45□□□□□ -0.26
ATM-226ENST00000638443 CDCA8Q53HL2 280 aa13.45□□□□□ -0.26
ATM-226ENST00000638443 PRAM1Q96QH2 718 aa13.44□□□□□ -0.26
ATM-226ENST00000638443 TMEM2Q9UHN6 1383 aa13.43□□□□□ -0.26
ATM-226ENST00000638443 RALBP1Q15311 655 aa13.43□□□□□ -0.26
ATM-226ENST00000638443 METP08581 1390 aa13.43□□□□□ -0.26
ATM-226ENST00000638443 PLEKHH1Q9ULM0 1364 aa13.43□□□□□ -0.26
ATM-226ENST00000638443 MINK1Q8N4C8 1332 aaPredicted RBP13.42□□□□□ -0.26
ATM-226ENST00000638443 RIMS1Q86UR5 1692 aaKnown RBP13.42□□□□□ -0.26
ATM-226ENST00000638443 CARD14Q9BXL6 1004 aa13.42□□□□□ -0.26
ATM-226ENST00000638443 CABP2Q9NPB3 220 aa13.42□□□□□ -0.26
ATM-226ENST00000638443 TMC1Q8TDI8 760 aa13.42□□□□□ -0.26
ATM-226ENST00000638443 SLC12A5Q9H2X9 1139 aa13.42□□□□□ -0.26
ATM-226ENST00000638443 KNSTRNQ9Y448 316 aa13.42□□□□□ -0.26
ATM-226ENST00000638443 LTKP29376 864 aa13.41□□□□□ -0.26
ATM-226ENST00000638443 MAPK8IP2Q13387 824 aaPredicted RBP13.41□□□□□ -0.26
ATM-226ENST00000638443 NLRP1Q9C000 1473 aa13.41□□□□□ -0.26
ATM-226ENST00000638443 WAPLQ7Z5K2 1190 aa13.4□□□□□ -0.26
ATM-226ENST00000638443 PNISRQ8TF01 805 aaKnown RBP13.39□□□□□ -0.27
ATM-226ENST00000638443 POGKQ9P215 609 aa13.39□□□□□ -0.27
ATM-226ENST00000638443 BRD4O60885 1362 aaPredicted RBP13.39□□□□□ -0.27
ATM-226ENST00000638443 NLRP13Q86W25 1043 aa13.39□□□□□ -0.27
ATM-226ENST00000638443 EVC2Q86UK5 1308 aa13.38□□□□□ -0.27
ATM-226ENST00000638443 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.38□□□□□ -0.27
ATM-226ENST00000638443 NSD3Q9BZ95 1437 aa13.38□□□□□ -0.27
ATM-226ENST00000638443 LRPPRCP42704 1394 aaKnown RBP13.38□□□□□ -0.27
ATM-226ENST00000638443 ADAMTS13Q76LX8 1427 aa13.37□□□□□ -0.27
ATM-226ENST00000638443 SRPK2P78362 688 aaKnown RBP13.37□□□□□ -0.27
ATM-226ENST00000638443 PAXIP1Q6ZW49 1069 aaPredicted RBP13.36□□□□□ -0.27
ATM-226ENST00000638443 TXNDC2Q86VQ3 553 aa13.36□□□□□ -0.27
ATM-226ENST00000638443 SLC26A8Q96RN1 970 aa13.35□□□□□ -0.27
ATM-226ENST00000638443 DLC1Q96QB1 1528 aa13.35□□□□□ -0.27
ATM-226ENST00000638443 ADAMTSL3P82987 1691 aa13.35□□□□□ -0.27
ATM-226ENST00000638443 PPP2R1AP30153 589 aa13.34□□□□□ -0.27
ATM-226ENST00000638443 SLIT1O75093 1534 aa13.34□□□□□ -0.27
ATM-226ENST00000638443 CEP170BQ9Y4F5 1589 aaPredicted RBP13.34□□□□□ -0.27
ATM-226ENST00000638443 ABCC11Q96J66 1382 aa13.34□□□□□ -0.27
ATM-226ENST00000638443 ARHGAP23Q9P227 1491 aa13.33□□□□□ -0.27
ATM-226ENST00000638443 PLEKHG1Q9ULL1 1385 aa13.33□□□□□ -0.28
ATM-226ENST00000638443 CFAP44Q96MT7 982 aa13.33□□□□□ -0.28
ATM-226ENST00000638443 TSHZ2Q9NRE2 1034 aa13.33□□□□□ -0.28
ATM-226ENST00000638443 A0A1W2PP64 1363 aa13.32□□□□□ -0.28
ATM-226ENST00000638443 NBR1Q14596 966 aa13.32□□□□□ -0.28
ATM-226ENST00000638443 CDK19Q9BWU1 502 aa13.32□□□□□ -0.28
ATM-226ENST00000638443 ZBED9Q6R2W3 1325 aa13.32□□□□□ -0.28
ATM-226ENST00000638443 ROBO2Q9HCK4 1378 aa13.32□□□□□ -0.28
ATM-226ENST00000638443 KNDC1Q76NI1 1749 aa13.32□□□□□ -0.28
ATM-226ENST00000638443 HDGFP51858 240 aaKnown RBP13.31□□□□□ -0.28
ATM-226ENST00000638443 NPC1L1Q9UHC9 1359 aa13.31□□□□□ -0.28
ATM-226ENST00000638443 PTPRUQ92729 1446 aa13.31□□□□□ -0.28
ATM-226ENST00000638443 CPS1P31327 1500 aa13.31□□□□□ -0.28
ATM-226ENST00000638443 CD163L1Q9NR16 1453 aa13.31□□□□□ -0.28
ATM-226ENST00000638443 ANKRD36BQ8N2N9 1353 aa13.31□□□□□ -0.28
ATM-226ENST00000638443 TNNT2P45379 298 aaPredicted RBP13.31□□□□□ -0.28
ATM-226ENST00000638443 MED14O60244 1454 aa13.3□□□□□ -0.28
ATM-226ENST00000638443 TECPR2O15040 1411 aa13.3□□□□□ -0.28
ATM-226ENST00000638443 NCKAP5LQ9HCH0 1330 aa13.29□□□□□ -0.28
ATM-226ENST00000638443 SALL2Q9Y467 1007 aaPredicted RBP13.29□□□□□ -0.28
ATM-226ENST00000638443 EID1Q9Y6B2 187 aa13.29□□□□□ -0.28
ATM-226ENST00000638443 ATAD2Q6PL18 1390 aa13.29□□□□□ -0.28
ATM-226ENST00000638443 USP32Q8NFA0 1604 aa13.28□□□□□ -0.28
ATM-226ENST00000638443 THEMISQ8N1K5 641 aaPredicted RBP13.28□□□□□ -0.28
ATM-226ENST00000638443 PUS7Q96PZ0 661 aaKnown RBP13.27□□□□□ -0.28
ATM-226ENST00000638443 CABP1Q9NZU7 370 aa13.27□□□□□ -0.28
ATM-226ENST00000638443 FAM135BQ49AJ0 1406 aa13.27□□□□□ -0.29
ATM-226ENST00000638443 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.26□□□□□ -0.29
ATM-226ENST00000638443 WASLO00401 505 aaPredicted RBP13.25□□□□□ -0.29
ATM-226ENST00000638443 ZNF142P52746 1687 aaPredicted RBP13.25□□□□□ -0.29
ATM-226ENST00000638443 CGNL1Q0VF96 1302 aa13.25□□□□□ -0.29
ATM-226ENST00000638443 NUTM2FA1L443 756 aa13.25□□□□□ -0.29
ATM-226ENST00000638443 MORC1Q86VD1 984 aa13.25□□□□□ -0.29
ATM-226ENST00000638443 ADAMTS8Q9UP79 889 aa13.25□□□□□ -0.29
ATM-226ENST00000638443 SUPT16HQ9Y5B9 1047 aaKnown RBP13.25□□□□□ -0.29
ATM-226ENST00000638443 BLMP54132 1417 aaPredicted RBP13.24□□□□□ -0.29
ATM-226ENST00000638443 GGNBP2Q9H3C7 697 aa13.24□□□□□ -0.29
ATM-226ENST00000638443 NINLQ9Y2I6 1382 aa13.24□□□□□ -0.29
ATM-226ENST00000638443 PRR36Q9H6K5 1346 aa13.24□□□□□ -0.29
ATM-226ENST00000638443 AMOTL2Q9Y2J4 779 aa13.24□□□□□ -0.29
ATM-226ENST00000638443 PPIP5K1Q6PFW1 1433 aa13.23□□□□□ -0.29
ATM-226ENST00000638443 ATP7BP35670 1465 aa13.23□□□□□ -0.29
ATM-226ENST00000638443 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.22□□□□□ -0.29
ATM-226ENST00000638443 IRX6P78412 446 aaPredicted RBP13.21□□□□□ -0.29
ATM-226ENST00000638443 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.21□□□□□ -0.29
ATM-226ENST00000638443 TERF2IPQ9NYB0 399 aa13.21□□□□□ -0.29
ATM-226ENST00000638443 TBX22Q9Y458 520 aa13.21□□□□□ -0.29
ATM-226ENST00000638443 XRN1Q8IZH2 1706 aaKnown RBP13.21□□□□□ -0.3
ATM-226ENST00000638443 DIP2AQ14689 1571 aa13.21□□□□□ -0.3
ATM-226ENST00000638443 WDR43Q15061 677 aaKnown RBP eCLIP13.21□□□□□ -0.3
ATM-226ENST00000638443 CCDC146Q8IYE0 955 aa13.21□□□□□ -0.3
ATM-226ENST00000638443 NUDT16Q96DE0 195 aaKnown RBP13.21□□□□□ -0.3
ATM-226ENST00000638443 ADGRB2O60241 1585 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms