RNA–Protein interactions for RNA: ENST00000638351.1

KCNMA1-233, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-233ENST00000638351 C22orf23Q9BZE7 217 aa16.35■□□□□ 0.21
KCNMA1-233ENST00000638351 SYCP2Q9BX26 1530 aa16.35■□□□□ 0.21
KCNMA1-233ENST00000638351 RLBP1P12271 317 aa16.34■□□□□ 0.21
KCNMA1-233ENST00000638351 AMER1Q5JTC6 1135 aaPredicted RBP16.34■□□□□ 0.21
KCNMA1-233ENST00000638351 PCDHB15Q9Y5E8 787 aa16.34■□□□□ 0.21
KCNMA1-233ENST00000638351 ZNF428Q96B54 188 aa16.33■□□□□ 0.21
KCNMA1-233ENST00000638351 PLXNC1O60486 1568 aa16.33■□□□□ 0.2
KCNMA1-233ENST00000638351 RNF123Q5XPI4 1314 aa16.32■□□□□ 0.2
KCNMA1-233ENST00000638351 L1TD1Q5T7N2 865 aaKnown RBP16.31■□□□□ 0.2
KCNMA1-233ENST00000638351 GOLGA6L22H0YM25 854 aa16.31■□□□□ 0.2
KCNMA1-233ENST00000638351 NOB1Q9ULX3 412 aaKnown RBP16.31■□□□□ 0.2
KCNMA1-233ENST00000638351 PARD3Q8TEW0 1356 aa16.31■□□□□ 0.2
KCNMA1-233ENST00000638351 SCAPERQ9BY12 1400 aa16.31■□□□□ 0.2
KCNMA1-233ENST00000638351 ABCC1P33527 1531 aa16.29■□□□□ 0.2
KCNMA1-233ENST00000638351 CARD14Q9BXL6 1004 aa16.29■□□□□ 0.2
KCNMA1-233ENST00000638351 RARSP54136 660 aaKnown RBP16.29■□□□□ 0.2
KCNMA1-233ENST00000638351 LRPPRCP42704 1394 aaKnown RBP16.29■□□□□ 0.2
KCNMA1-233ENST00000638351 PRKCSHP14314 528 aaPredicted RBP16.28■□□□□ 0.2
KCNMA1-233ENST00000638351 IPO8O15397 1037 aaKnown RBP16.28■□□□□ 0.2
KCNMA1-233ENST00000638351 MPNDQ8N594 471 aa16.28■□□□□ 0.2
KCNMA1-233ENST00000638351 PTMAP06454 111 aaKnown RBP16.27■□□□□ 0.2
KCNMA1-233ENST00000638351 ABCA9Q8IUA7 1624 aa16.27■□□□□ 0.2
KCNMA1-233ENST00000638351 HDGFL2Q7Z4V5 671 aaPredicted RBP16.27■□□□□ 0.2
KCNMA1-233ENST00000638351 DUOX2Q9NRD8 1548 aa16.27■□□□□ 0.19
KCNMA1-233ENST00000638351 TBC1D2Q9BYX2 928 aa16.26■□□□□ 0.19
KCNMA1-233ENST00000638351 LTV1Q96GA3 475 aaPredicted RBP16.26■□□□□ 0.19
KCNMA1-233ENST00000638351 RALGAPBQ86X10 1494 aa16.25■□□□□ 0.19
KCNMA1-233ENST00000638351 PANK2Q9BZ23 570 aa16.25■□□□□ 0.19
KCNMA1-233ENST00000638351 PRAG1Q86YV5 1406 aa16.25■□□□□ 0.19
KCNMA1-233ENST00000638351 TRAK2O60296 914 aa16.25■□□□□ 0.19
KCNMA1-233ENST00000638351 RAPGEF3O95398 923 aa16.25■□□□□ 0.19
KCNMA1-233ENST00000638351 PDE3AQ14432 1141 aa16.24■□□□□ 0.19
KCNMA1-233ENST00000638351 TMEM57Q8N5G2 664 aa16.24■□□□□ 0.19
KCNMA1-233ENST00000638351 SSH1Q8WYL5 1049 aa16.24■□□□□ 0.19
KCNMA1-233ENST00000638351 DNTTIP2Q5QJE6 756 aaKnown RBP16.24■□□□□ 0.19
KCNMA1-233ENST00000638351 LMOD2Q6P5Q4 547 aa16.24■□□□□ 0.19
KCNMA1-233ENST00000638351 RTEL1-TNFRSF6BF6WH68 1400 aa16.24■□□□□ 0.19
KCNMA1-233ENST00000638351 NSD3Q9BZ95 1437 aa16.24■□□□□ 0.19
KCNMA1-233ENST00000638351 PRKAR2BP31323 418 aa16.24■□□□□ 0.19
KCNMA1-233ENST00000638351 DCTN1Q14203 1278 aa16.24■□□□□ 0.19
KCNMA1-233ENST00000638351 ASXL2Q76L83 1435 aa16.24■□□□□ 0.19
KCNMA1-233ENST00000638351 UNC13BO14795 1591 aa16.23■□□□□ 0.19
KCNMA1-233ENST00000638351 DIAPH1O60610 1272 aaKnown RBP16.23■□□□□ 0.19
KCNMA1-233ENST00000638351 DDX49Q9Y6V7 483 aaKnown RBP16.23■□□□□ 0.19
KCNMA1-233ENST00000638351 EVC2Q86UK5 1308 aa16.23■□□□□ 0.19
KCNMA1-233ENST00000638351 TERF2IPQ9NYB0 399 aa16.22■□□□□ 0.19
KCNMA1-233ENST00000638351 DDX19BQ9UMR2 479 aa16.21■□□□□ 0.19
KCNMA1-233ENST00000638351 PRAM1Q96QH2 718 aa16.21■□□□□ 0.19
KCNMA1-233ENST00000638351 CHMP5Q9NZZ3 219 aa16.21■□□□□ 0.19
KCNMA1-233ENST00000638351 MVPQ14764 893 aaKnown RBP16.2■□□□□ 0.18
KCNMA1-233ENST00000638351 GBP4Q96PP9 640 aa16.2■□□□□ 0.18
KCNMA1-233ENST00000638351 ARHGEF12Q9NZN5 1544 aa16.2■□□□□ 0.18
KCNMA1-233ENST00000638351 FANCAO15360 1455 aa16.2■□□□□ 0.18
KCNMA1-233ENST00000638351 TRIM6-TRIM34B2RNG4 842 aa16.2■□□□□ 0.18
KCNMA1-233ENST00000638351 CABP1Q9NZU7 370 aa16.2■□□□□ 0.18
KCNMA1-233ENST00000638351 CFAP74Q9C0B2 1584 aa16.19■□□□□ 0.18
KCNMA1-233ENST00000638351 BCORL1Q5H9F3 1711 aa16.19■□□□□ 0.18
KCNMA1-233ENST00000638351 FAM135AQ9P2D6 1515 aa16.19■□□□□ 0.18
KCNMA1-233ENST00000638351 TRIM27P14373 513 aa16.18■□□□□ 0.18
KCNMA1-233ENST00000638351 RRS1Q15050 365 aaKnown RBP16.18■□□□□ 0.18
KCNMA1-233ENST00000638351 RBM42Q9BTD8 480 aaKnown RBP16.18■□□□□ 0.18
KCNMA1-233ENST00000638351 NKTRP30414 1462 aaKnown RBP16.17■□□□□ 0.18
KCNMA1-233ENST00000638351 MCM4P33991 863 aa16.17■□□□□ 0.18
KCNMA1-233ENST00000638351 GLIPR1L2Q4G1C9 344 aa16.17■□□□□ 0.18
KCNMA1-233ENST00000638351 KDM2BQ8NHM5 1336 aa16.17■□□□□ 0.18
KCNMA1-233ENST00000638351 NUTM2GQ5VZR2 741 aa16.17■□□□□ 0.18
KCNMA1-233ENST00000638351 VSIG10Q8N0Z9 540 aa16.17■□□□□ 0.18
KCNMA1-233ENST00000638351 RILPL2Q969X0 211 aa16.17■□□□□ 0.18
KCNMA1-233ENST00000638351 MIS18AQ9NYP9 233 aa16.17■□□□□ 0.18
KCNMA1-233ENST00000638351 MCTP1Q6DN14 999 aa16.16■□□□□ 0.18
KCNMA1-233ENST00000638351 ATF7IPQ6VMQ6 1270 aa16.16■□□□□ 0.18
KCNMA1-233ENST00000638351 RNF214Q8ND24 703 aa16.16■□□□□ 0.18
KCNMA1-233ENST00000638351 IQGAP3Q86VI3 1631 aa16.16■□□□□ 0.18
KCNMA1-233ENST00000638351 MAGI2Q86UL8 1455 aa16.16■□□□□ 0.18
KCNMA1-233ENST00000638351 BCL11BQ9C0K0 894 aaPredicted RBP16.16■□□□□ 0.18
KCNMA1-233ENST00000638351 TRAPPC8Q9Y2L5 1435 aa16.16■□□□□ 0.18
KCNMA1-233ENST00000638351 VGFO15240 615 aaPredicted RBP16.15■□□□□ 0.18
KCNMA1-233ENST00000638351 TMPOP42166 694 aaKnown RBP16.15■□□□□ 0.18
KCNMA1-233ENST00000638351 CASC1Q6TDU7 716 aa16.15■□□□□ 0.18
KCNMA1-233ENST00000638351 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.15■□□□□ 0.18
KCNMA1-233ENST00000638351 MSNP26038 577 aaKnown RBP16.15■□□□□ 0.18
KCNMA1-233ENST00000638351 WAPLQ7Z5K2 1190 aa16.15■□□□□ 0.18
KCNMA1-233ENST00000638351 A2MP01023 1474 aa16.15■□□□□ 0.18
KCNMA1-233ENST00000638351 ZFYVE16Q7Z3T8 1539 aa16.14■□□□□ 0.18
KCNMA1-233ENST00000638351 ADGRL1O94910 1474 aa16.14■□□□□ 0.17
KCNMA1-233ENST00000638351 OS9Q13438 667 aaPredicted RBP16.14■□□□□ 0.17
KCNMA1-233ENST00000638351 CALD1Q05682 793 aaKnown RBP16.13■□□□□ 0.17
KCNMA1-233ENST00000638351 FAM83GA6ND36 823 aa16.13■□□□□ 0.17
KCNMA1-233ENST00000638351 SMARCA5O60264 1052 aaPredicted RBP16.13■□□□□ 0.17
KCNMA1-233ENST00000638351 INO80Q9ULG1 1556 aaPredicted RBP16.12■□□□□ 0.17
KCNMA1-233ENST00000638351 ATP7AQ04656 1500 aa16.12■□□□□ 0.17
KCNMA1-233ENST00000638351 GPRASP1Q5JY77 1395 aa16.11■□□□□ 0.17
KCNMA1-233ENST00000638351 CHMP3Q9Y3E7 222 aa16.11■□□□□ 0.17
KCNMA1-233ENST00000638351 DTNBO60941 627 aa16.1■□□□□ 0.17
KCNMA1-233ENST00000638351 CAVIN1Q6NZI2 390 aaKnown RBP16.1■□□□□ 0.17
KCNMA1-233ENST00000638351 RTF1Q92541 710 aaKnown RBP16.1■□□□□ 0.17
KCNMA1-233ENST00000638351 CCDC9Q9Y3X0 531 aaKnown RBP16.1■□□□□ 0.17
KCNMA1-233ENST00000638351 TSHZ3Q63HK5 1081 aa16.1■□□□□ 0.17
KCNMA1-233ENST00000638351 CYB5RLQ6IPT4 315 aa16.1■□□□□ 0.17
KCNMA1-233ENST00000638351 EMILIN1Q9Y6C2 1016 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms